Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001369763.1
Aligned Length:
2147
Identities:
443
Gaps:
1657

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGCTCTTCCTCAGATTTTCGGTCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CCACTTCCCAGGTTCAAGCAATTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAAT  148

Query    1  --ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACAT  72
              |||||||||...||||..||.||||.|||||||||||||||||.|.|||||||||||||||||||||||||.
Sbjct  149  GCATGATGAAGACATTCTTCTCAACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAA  222

Query   73  GAAAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCA  146
            |.|||||||||||||.|||||||||||||||||.|||||||||||||.||||||..|||..|||||||||||.|
Sbjct  223  GCAAGTCATCACATTGGAGATTTTTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAA  296

Query  147  AGAAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATG  220
            ||||||.||||..||||..||.|.|||||||||||||||||||||||||||||||||||||||||.||.|||||
Sbjct  297  AGAAGATGAAACAAATGACCATGCAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATG  370

Query  221  ATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTC  294
            ||||||||||||||||||||||||.||||||||||||||||||||..||||||||||||||||||||||||||.
Sbjct  371  ATCAAAGGCATGCTGGAAACAAGCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTG  444

Query  295  CACATATTTCAGCCTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGAC  368
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||.||||||.||||.|.|||..||
Sbjct  445  CACATATTTCAGCCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAAC  518

Query  369  ATCCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCAT  442
            ||||||||||||||.||||||.||||||||||.||||||||||||.|||||.||||||||||||||||||||||
Sbjct  519  ATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCAT  592

Query  443  TACCCATACAAAAATTGGGAA-GTACACATGAGAGAAAAATCTTTCCAATG-----------------------  492
            |||.||.|||||||  .|||| |||||||||||||||||||||||||||||                       
Sbjct  593  TACTCACACAAAAA--CGGAATGTACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTA  664

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  665  ATTGTAGCTCACTTTTAAAAAAACATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGC  738

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  739  AAGGTATTTAATCAGAAGCGATACCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAA  812

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  813  TGAGTGTGGCAAGATCTTTGGTCACAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTT  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  ATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGA  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  GGGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAAT  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  TCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCC  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  ATCGTAGGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACAT  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  CTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATA  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  TAATTCATACCTGGCAAAACATAGTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGG  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  TTTTTAATCAACAATCAACTCTTGCACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAA  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  TGTGACAAAGTTTTCAGGTGCAAATCACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAA  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  ATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGA  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  AACCATACATGTGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCAT  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  ACTGCAGAGAAACCGTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAG  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  GAGGATTCATACTGGAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGG  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  CACAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACA  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  TCATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTT  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  CAGTCAGATGTCATCCCTCGTATACCATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTG  1996

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1997  GCAAGGTTTTTAATCAACAAGCACACCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGT  2070

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2071  AATGAGTGTGGCAAGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACC  2144

Query  493  -  492
             
Sbjct 2145  T  2145

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