Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_001369765.1
Aligned Length:
2048
Identities:
443
Gaps:
1558

Alignment

Query    1  ---------------------------------------------------ATGATGAAGGAGTTCTCATCCAC  23
                                                               |||||||||...||||..||.||
Sbjct    1  ATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCTCTTCCAAATGCATGATGAAGACATTCTTCTCAAC  74

Query   24  AGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATTTTT  97
            ||.|||||||||||||||||.|.|||||||||||||||||||||||||.|.|||||||||||||.|||||||||
Sbjct   75  AGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATTTTT  148

Query   98  GCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCACGAA  171
            ||||||||.|||||||||||||.||||||..|||..|||||||||||.|||||||.||||..||||..||.|.|
Sbjct  149  GCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCATGCA  222

Query  172  GCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGAAACAAGCC  245
            ||||||||||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||.
Sbjct  223  GCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCA  296

Query  246  TATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGAATGGAAAA  319
            ||||||||||||||||||||..||||||||||||||||||||||||||.||||||||||||||||||.||||||
Sbjct  297  TATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGAAAA  370

Query  320  TTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAGTCCC  393
            |||||||||||||||||||||||||||.||||||.||||.|.|||..||||||||||||||||.||||||.|||
Sbjct  371  TTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCC  444

Query  394  AAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAA-GTA  466
            |||||||.||||||||||||.|||||.|||||||||||||||||||||||||.||.|||||||  .|||| |||
Sbjct  445  AAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAA--CGGAATGTA  516

Query  467  CACATGAGAGAAAAATCTTTCCAATG------------------------------------------------  492
            ||||||||||||||||||||||||||                                                
Sbjct  517  CACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAACA  590

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  591  TCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATACC  664

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  665  TTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTCAC  738

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  739  AATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAAGT  812

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  813  TTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGTTT  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  GTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACAAG  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  TGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAGAA  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  ACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCATA  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  CTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATAATTCATACCTGGCAAAACATAGT  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  ATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCTTGC  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  ACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTTTCAGGTGCAAAT  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  CACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTC  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  CGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGG  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  CAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTG  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  AAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCG  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  TACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGG  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  AGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGC  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  TTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATAC  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  CATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACA  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  CCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTC  1996

Query  493  --------------------------------------------------  492
                                                              
Sbjct 1997  AGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCT  2046

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