Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NM_198457.4
Aligned Length:
2168
Identities:
431
Gaps:
1678

Alignment

Query    1  ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGA  74
            ||||||||||||.|||..||.||||.|||||||||||||||||||||||||||||||||||||||||||.||.|
Sbjct    1  ATGATGAAGGAGGTCTTGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGATATCA  74

Query   75  AAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAG  148
            ||||.||||||||.|||||||||||||||||||||||||||||||.||||||.|..|||||||||||||.||||
Sbjct   75  AAGTTATCACATTGGAGATTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATGATATTGAGTTTCAGTGTCAAG  148

Query  149  AAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGAT  222
            ||||.|||||.|||||.||.|||||||||||||||.||||.|||.|||||||||||||.|||||||.|||||||
Sbjct  149  AAGATGAAAGAAATGGCCATGAAGCACCCATGACAAAAATAAAAAAGTTGACTGGTAGCACAGACCAACATGAT  222

Query  223  CAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCA  296
            ||.|||||||||||||||||||||||||||||||||||||||||.||||||.||||.|||||||||||||||||
Sbjct  223  CACAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGAACTCCA  296

Query  297  CATATTTCAGCCTGAATGG-AAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACA  369
            ||||.||||| .|.||.|| |||||||||||||||.||||||||||||.||...||||..|||...|||..|||
Sbjct  297  CATAATTCAG-ATCAAAGGTAAAATTGGTAATCAATTTGAGAAGTCTACCAGTGATGCTCCCTCGGTTTCAACA  369

Query  370  TCCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATT  443
            |||||||||||||||..|||.|||.|||.||.|||||||||||||||||||||||||||||...||||||||.|
Sbjct  370  TCCCAAAGAATTTCTCCTAGGCCCCAAATCCATATTTCTAATAACTATGGGAATAATTCCCCGAATTCTTCACT  443

Query  444  ACCCATACAAAAATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATG-------------------------  492
            ||.|..||||||| ..|||||||.|||||||||||||||||||||||||                         
Sbjct  444  ACTCCCACAAAAA-CAGGAAGTATACATGAGAGAAAAATCTTTCCAATGTAATGAGAGTGGCAAAGCCTTTAAT  516

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  517  TGTAGCTCACTCTTAAGGAAACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATGTGGCAA  590

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  591  GCTCTTTAATCACAAGCAATACCTTACATGCCATTGTAGATGTCACACTGGAGAGAAACCTTACAAGTGTAATG  664

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  665  AGTGTGGAAAGTCCTTCAGTCAGGTATCATCCCTTACATGCCATCGTAGACTTCACACTGCAGTAAAATCTCAC  738

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  739  AAGTGTAATGAGTGTGGCAAGATCTTTGGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGA  812

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  813  AAAACCTTACAAGTGTAATGAATGTGACAAAGCTTTTAATCAGCAATCAAACCTTGCACGTCATCGTAGAATTC  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  ATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGGAAATCAACCCTTGAGTCACAT  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  AAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACACAGCTTTCACATGGAATTCTCAGCT  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  GGCAAGACATAAAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCACA  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  AGTCATCCCTTGTATGCCATCATAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTCTGTGACAAGGCT  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  TTTGCGTGGAATTCACACCTGGTAAGACATACTAGAATTCATAGTGGAGGAAAACCTTACAAGTGTAATGAATG  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  TGGGAAGACCTTTGGTCAAAATTCAGATCTTCTAATTCATAAGTCAATTCATACTGGAGAGCAACCTTACAAAT  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  ATGAAGAATGTGAAAAGGTTTTCAGTTGTGGATCAACCCTTGAGACACATAAGATAATTCACACCGGAGAGAAA  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  CCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCGTGTCATTCCTATCTGGCAAAACATACTAGAATTCATAG  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  TGGAGAGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCCGTCTGAGGTCATACCTTGCAAGCCATCGCA  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  GAGTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAGTGCAGCAAGACCTTCAGTCAGAGGTCATACCTTCAT  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  TGCCATCGTAGACTTCATAGTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCACAAGCC  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  ATCCCTTGTTCACCATCGTAGACTTCATACTGGAGAGAAATCTTACAAATGTACGGTTTGTGACAAGGCTTTCG  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  TGCGTAATTCATACCTGGCAAGACATACCAGAATTCACACTGCAGAGAAACCTTACAAGTGTAATGAATGTGGG  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  AAGGCTTTTAATCAACAATCACAACTTTCACTTCATCATAGAATTCATGCTGGGGAGAAACTTTACAAATGTGA  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  AACATGTGACAAAGTTTTCAGTCGCAAATCACACCTTAAAAGACATAGGAGAATTCATCCTGGAAAGAAACCAT  1996

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1997  ACAAATGTAAGGTTTGTGACAAGACTTTTGGGAGTGATTCACACCTGAAACAACATACTGGACTTCACACTGGA  2070

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2071  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGCAAGCAGTCAACACTTATTCACCATCAGGCAGT  2144

Query  493  ----------------------  492
                                  
Sbjct 2145  TCATGGTGTAGGGAAACTTGAC  2166

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