Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NR_102301.2
Aligned Length:
4661
Identities:
441
Gaps:
4170

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGTGGATCCCGTGGAATGACGGTCACGCCGCGGCGGGCGGATTGACTTCTAAAGACTGTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGAAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGTCCCTCTCATCT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CGCTTAGGTTCCGTCTCTCGTGACCCAGTGTCATGAACTTGGGAAGAGGCTGCACTGGGCAGGTCCTGGGAAGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTCACACCCCGACATGGATGGACACGGGGTGAGGGTCCTGTGGTGTCAGTGCTCTTGGGCAGCAGGGATTGTT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAGGGGCCACATCTGGATGCACTGTCAGCTCACTGTGGACCAGGATTGGAGCAGCTGCCAATGGGAGTCACGTA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TTAATATGCACGAAGTACGTGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGCCTGGACCCTGCTCAGAGGACTTTATACAGGGACGTGATGCTGGAGAATTATAGGAACCTCGTCTCCCTGG  518

Query    1  -----------------ATGATGAAGGAGTTCTCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGG  57
                             |||.|||||..|||.||.||.||||.|||||||||||||||||||||||||||||||
Sbjct  519  ATATCTCTTCCAAATGCATGTTGAAGACGTTGTCGTCAACAGGGCAAGGCAATACAGAAGTGATCCACACAGGG  592

Query   58  ACATTGCAAAGACATGAAAGTCATCACATTAGAGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTT  131
            ||||||||.|||||.|.|||||||||||||.||||.|||||.|||||.||||||||||||||.||||||..|||
Sbjct  593  ACATTGCACAGACAAGCAAGTCATCACATTGGAGAATTTTGTTTCCATGAAATTGAGAAAGACATTCATGGCTT  666

Query  132  TGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTA  205
            .||||||||||||.|||||||.||||..|||||.||.|.||||||||||||||||||||||||||||.||||||
Sbjct  667  CGAGTTTCAGTGGAAAGAAGATGAAACAAATGGCCATGCAGCACCCATGACAGAAATCAAAGAGTTGGCTGGTA  740

Query  206  GTACAGACCGACATGATCAAAGGCATGCTGGAAACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCG  279
            ||||||.||.|||||||||||||||||||||||||||||.|||||||||||||||||||||.||||||||||.|
Sbjct  741  GTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAGCGTATTAAAGATCAGCTTGGATCAAGCTTTCATTTG  814

Query  280  CATCTGCCTGAACTCCACATATTTCAGCCTGAATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGC  353
            |||||||||||||..||||||||||||.|||||.|||||||||||||||||||||||||||||||||.||||||
Sbjct  815  CATCTGCCTGAACCGCACATATTTCAGTCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGC  888

Query  354  CTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATT  427
            .||||.|.|||..||||||||||||||||.||||||.||||||||||.||||||||||||.|||||.|||||||
Sbjct  889  TTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATT  962

Query  428  CCCTCCATTCTTCATTACCCATACAAAAATTGGGAAGTACACATGAGAGAAAAATCTTTCCAATG---------  492
            ||||||||||||||||||.||.||||||| |||||||||||||||||||||||||||||..||||         
Sbjct  963  CCCTCCATTCTTCATTACTCACACAAAAA-TGGGAAGTACACATGAGAGAAAAATCTTTTGAATGTATACAGAG  1035

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1036  CTTCAAATCCTTTAATTGCAGCTCACTCTTAAAAAAACATCAGATAATTCACTTAGAAGAGAAACAATGTAAAT  1109

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1110  GTGATGTATGTGGCAAGGTCTTTAATCAGAAGCGATACCTTGCCTGCCATCGTAGATGTCACACTGGTGAGAAA  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  CCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGGTCATAATTCATCCCTCTTCATTCACAAAGCGCTTCATAC  1257

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1258  TGGAGAGAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAAGA  1331

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1332  GGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATGAGGCTTTCGCATATAATTCATATCTGGCA  1405

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1406  AAACATACTATACTTCACACTGGAGAGAAACCTTACACATGTAATGAATGTGGCAAAGTTTTTAATCGACTATC  1479

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1480  AACCCTTGCACGCCATCATAGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAGTGTGACAAAGTTTTCA  1553

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1554  GTCGCAAATCACACCTTGAAAGACATAGGAGGATTCATAGTGGAGAGAAACCTTACAAATGTGAAGAATGTTGC  1627

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1628  AAAGTTTTCAGTCGCAAATCAAACCTGGAAAGACACAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAA  1701

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1702  GGTTTGTGACAAGGCTTTCCAGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTT  1775

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1776  ACAAGTGTAATGAGTGTGGCAAGACCTTCGGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGA  1849

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1850  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTTGTATACCATCATAGGCT  1923

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1924  TCATAGTGGAGAGAAGCCTTAATAGTGTAATGAGTGTGGCAAGACCTTCCATCACAATTCAACCCTGTAAGTCA  1997

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1998  TAAGGCAATTCATACTGGAGAGAAACCTTACAAGCATAATGAATGTGGCAAGGTTTTTAATCAAAAAGCAACCT  2071

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2072  TTGCACATCACCATAGACTTCATACTGGAGAGAAACCTTACAAATGGGAGGAATGTGACAAAAGTTTTCAGTTG  2145

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2146  TAAATCAAACCTTAAAACACATAAGAAAATTCACATTGAAGAGAAACCATACAGAGGTAAGGTTTGTGACAAGG  2219

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2220  TTTTTGCATATAATGCATATCTGGCAAAACATACTAGAATTCACACTGGAGAGAAACTCATTATAAGTGTAATG  2293

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2294  AGTGTGGCAAGACCGTTGGTCAAAATTCACACCTTGTAATTAAAAGGTCAAAATTCACACCTTGTAATTCATAG  2367

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2368  TGGAGAGAAACCTTACAAGCACAATGAATGTGACATGGTTTTTAATCAACAATCACACCTTGCAAGTCATCATA  2441

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2442  GACTTCATACTGCATAGAAATCTTACAAACGTGAACAATGTGACAAAGTTTTCATTCACAAATCCAGCTTCAAA  2515

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2516  TACATAGGAGAATTCACACTGGAGAAAAGCCATAGAAATGTAAGGTTTGTGACAAGGCTTTCGGGAATGATTCA  2589

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2590  CACGTGGCACCCCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTGCAATGAGTGTGGCAAACCCTTTAG  2663

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2664  TGGGCAGTCACCACTTATTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTAATGTAATGATTGTCACA  2737

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2738  AAGTTTTCAGTAATGCTACAACCATTGCACATCATTGGAGAATCCACAGTGAAGAGATCTTACAAGTGTAATAA  2811

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2812  ATGTGGCAAATTTTTCAGACATCGTTCATGCCTTGCATTTCACTGGTGAACTCATGCTGGAGAGAAACCTTATA  2885

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2886  AATGTCATGATTGAGGCAAGGTCTTCAGTCAAGCTTCATCCTATGCAAAACATAGGAGGATTCATACAGGAGAG  2959

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2960  AAACCTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACACCTCATTAGACATCAGAGAATCCA  3033

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3034  TGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGAAGGGTCTTCAGTCCAAGGTCACTCCTTGCAGACCATC  3107

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3108  AGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCAGTGAGTATAGCAAACCATCAAGCATTAATTGACATTAG  3181

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3182  AGTCAAATCAGCCTTGACCTGAGTTTGTTGATTTAACATTGATTTCAAGCATTAATTGCCATTAAACTGTTTAT  3255

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3256  GTTAAGAGGATTGCACTGGGGGCCATGGCTCATGCCTGTAATTCCAGCACTTTGAGAGGCAAAGACAGGTAGGT  3329

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3330  CACTGGAGCTCACGAGTTTGAGAACAGCCTAGCCAACAGATGGGAGCTACTTTTCCCAGCCTTTATTTTCTTTT  3403

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3404  TCTTGTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCGCCCAGGTTGGAGTGCAGTGGCACGATCTCAGCTCACT  3477

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3478  GCAACCTCCTCCTCCCAGGTTCAAGCAATTCTCCTGCCTCAGTCTCCCAAGTAGCTGACACTACAGTTGTGTGC  3551

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3552  CACCACACCTGGGTAATTTTTTGTGTTTTTAGTAGAGACTGGGTTTCACCGTGTTAGCCAGAATGGTCTCTATC  3625

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3626  TTCTGACTTTATGATCCACCCGACTCCACCTCCCAAAGTGCTGAGATTACAGGAGTGAGCCACTGTGCCTGGCC  3699

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3700  TGTTTTTTGTTTCTTTAACAAAAAGTTATAGAGACTTCTATGAGTATTGTACCGAATCTAAATCACAATTGAGT  3773

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3774  ATATAATCATTGAGCGATATTCATTTTTCCAATCAGTATGGGATTTATATCTATTTATACATGTTTTTAATCAT  3847

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3848  TTTGATCAATGTTTATAGATTTCAAGGTACAAACCTCACTTTTTATGTTTATTCCTAAATATTTCTTACTTTAA  3921

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3922  GTTCTTTAGCAAATGGAATTGGTTTTTAATTTTCTTTTAAAATTATTTATTGTTAATGTATGGAAATTCAACTA  3995

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3996  ATTTTTGGTGCTGTTATTCTATTCTGCAAATAAACTGAATGTGTTTGTTAGTTCCAGTTGCATTTTGGCTGACT  4069

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4070  CTTTGTGATTTTCTTTACAGAAGGTCATGTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGATTTGG  4143

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4144  ATGAGTTTGATTTCTTTTGCTATTTCATTGTTCTGGCTAGGACAGCCAGTATTGATTGAATAGAAGGGGTGAGA  4217

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4218  GCATTCTTGCATCATGTGAGATCCTACAGGAAAAGCATTCCGTTTTCCCTGATTGGTTATTTCTGCTGTGGTCA  4291

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4292  TTTCATGGATGGTCTTTGTATTGCTGAGGTAAATTTTCTTCTGTATCTATTTTGTGTGGGATTTCTATGATGAC  4365

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4366  TTGATGTTGACTTTTGTGAAATGCTTTTTCTCCATGTATTGAGATGATGTGGTTTTCATCTTTCATTGTGTTCA  4439

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4440  AGTGGTATATCACATTGATTTGCTTGACTATGTTGAACCATCCTTGCATCCCAGAAATAAGTGGCACTTGCATA  4513

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4514  TCTACAATCCTTTTAATATCCTCTTGAATACAGTTCGCTAGTACAAGGGGTCTTCAAGAAGTTCATGAAAAAAA  4587

Query  493  -------------------------------------------------------------------------  492
                                                                                     
Sbjct 4588  TACATATTATGTGAAAATTGCACATGATGTCACATTTTCTGCACCAAAATAAACTGGCACAAATCTGTTATAA  4660

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