Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NR_145445.2
Aligned Length:
5221
Identities:
439
Gaps:
4730

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACGCGCGCAAACCCGGAAGCAGATCGCGTGGAGTGAAGGTCCCTCAGCGGCGCGATTGACATCTAAAGACTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTGGTACATGAGGAAGAAACCCGGAAAAGGAAAGCAGAGGAGTCAGGGATGGCTCTTCCTCAGGGTCTATTGAC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACA  222

Query    1  -------------------------------------------------------ATG----ATGAAGGAGTTC  15
                                                                   |||    ||||||||||||
Sbjct  223  GGGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGGTATCTCTTCCAAATGCACAATGAAGGAGTTC  296

Query   16  TCATCCACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAG  89
            |||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|
Sbjct  297  TCATCAACAGCACAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAACGTCATCACATTGG  370

Query   90  AGATTTTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATG  163
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||
Sbjct  371  AGATTTTTCCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGATGAAAGAAATG  444

Query  164  GTCACGAAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGA  237
            |.||.|||||||||||||||.||||||||.|.||||..|||||||||||.|.|.|||||||.||||||||||||
Sbjct  445  GCCATGAAGCACCCATGACAAAAATCAAAAAATTGATGGGTAGTACAGAGCAATATGATCACAGGCATGCTGGA  518

Query  238  AACAAGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGA  311
            |||||||||||||||.|||||||||||||.|||||||||||.||||||.||||||||||||||||||||||..|
Sbjct  519  AACAAGCCTATTAAATATCAGCTTGGATCAAGCTTTCATTCACATCTGTCTGAACTCCACATATTTCAGCCCAA  592

Query  312  ATGGAAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTT  385
            |.||||||||..|||||||||.|||||||||||||.|.||||.||||...|||..|||.|||||||||||||||
Sbjct  593  AGGGAAAATTAATAATCAAGTGGAGAAGTCTATCAACGATGCTTCCTCGGTTTCAACAGCCCAAAGAATTTCTT  666

Query  386  GTAGTCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTG  459
            ||||.||||||||||.|||.|||||||||||||||.||||||..||..|||.||||||||.||.|||||.| ..
Sbjct  667  GTAGGCCCAAAACCCATATATCTAATAACTATGGGGATAATTTTCTGAATTATTCATTACTCACACAAAGA-CA  739

Query  460  GGAAGTACACATGAGAGAAAAATCTTTCCAATG-----------------------------------------  492
            ||||||||.||||||||||||||||||||||||                                         
Sbjct  740  GGAAGTACGCATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAAGCCTTTAATTATAGCTCACTCTTAA  813

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  814  GGAAACATCAGATTATTCATCTAGGAGAGAAACAATATAAATGTGATGTATGTGACAAGGTCTTTATTCGGAAG  887

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  888  CGATACCTTGCACGCCATCGTAGATGTCACACTGGTGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGTCCTT  961

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  962  CAGTCAGATGTCATCCCTTACATATCATCATCGACTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTG  1035

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1036  ACAAAGCTTTCAGACACAATTCAGCCCTTCAAAGACATAGGAGAATTCATACTGGAGAGAAACCACATAAGTGT  1109

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1110  AATGAGTGTGGCAAGACCTTTAGTCAGAAGTCATACCTTGCATGCCATCGTAGCATTCATACTGGAAAGAAACC  1183

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1184  TTACGAATGTGAAGAATGTGACAAAGCTTTCAGTTTCAAATCAAACCTTGAAAGTCATAGGATAACTCATACTG  1257

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1258  GAGAGAAACCATACAAGTGTAATGATTGTGGCAAGACCTTCAGTCATATGTCAACCCTTACATGCCATCGTAGA  1331

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1332  CTTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGATGAAGCTTTCCGTTTCAAATCAAGTCTTGAAAG  1405

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1406  ACATAGGAGAATTCATAATGGAGAGAAACTGTACAAATGTAATGAGTGTGGCAAGACCTTCAGTCAGGAGTTAT  1479

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1480  CCCTTACCTGCCATTGTAGACTTCATAGTGGAGAGAAACCTTGCAAGTGTGGAGAATGTGACAAGGCTTACAGT  1553

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1554  TTCAAATAAAATCTTGAAATACGTCAGAAAATTCATACTGGAGAGAAATGTTATAAGTGTAATGATTGTGGCAA  1627

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1628  GATCTTCAGTCATACGTCATCCATTGTATACCATCATAAATTTCATAGTGGAGAGAAACCTTACAAATGTGAAG  1701

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1702  AATGTGATGAAGCTTTCAGTTTCAAATCAAACCTTGAAAGACATAGGAGAATTCACACTGGTGAGAAACCTTAC  1775

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1776  AGGTGTAATAGGTGTGGCAAGACCTTCAGTCATACATCATCCCTTACATGCCATCATAGACTTCATACTGGAGA  1849

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1850  GAAACCTTACAAATGTGAAGAATGTGATGAAACTTTCAGATACAAATCAAATCTTGAAAGACATAGGAGAATTC  1923

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1924  ATAATGGAGAGAAACCGTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGAAGTCATGCCTTACACGCCAT  1997

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1998  CATAGACTTCATACTGGAAATAAATCTTATAAGTGTAATGAGTGTGGCAAGACCTTCAGTAAGGAGTTAACACA  2071

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2072  TGCCATCATAGACGTCATACTGGAGAGAAACCTTAGAAGTGCAATGAGTGTGGCAAAACCTTTCATAGGCAGTC  2145

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2146  AGCGCTTATTTACCATCAAGCAATCCATGGCAGAGGGAAACTTTACAAATGTAATGATTGTCACCACGTCTTCA  2219

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2220  GTAATGCTACAACTATTGCAAATCATTGGAGAATCCATAATAAAGAGAGACCTTACAAGTGTGATAAATGTGAC  2293

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2294  AAATTTTTCAGACATCGTTCATACCTTGCAGTTCACGGGCGAACTCATGCTGGAGAGAAACCTTACAAATGTGA  2367

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2368  AGAATGTGATAAAGCTTTCAGATTCAAATCAAACCTTGAAAGTCATAGGAGAATTCATACTAGAGAGAAACCTT  2441

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2442  ACAAGTGTAATGAGTGTGGTAAGATGTTCAGTCAAAATTCGGCCCTTGTAATTCATAAGGCAATTCATACTGGA  2515

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2516  GAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGCAAAGCAAAGCTTGCATGTCATCATAGACT  2589

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2590  TCATACTGGAGAGAACGCTTGCAAGTGTAATAAATGTGGCGAGGTTTTTAATCAACAAGCACACCTTGCACGTC  2663

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2664  ATCATAGAACTCATACTGGAGAGAAACATTACAAGTGTAATGAGTGTGGCAAGACCTACTCTCACAATTCAGTC  2737

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2738  CTTGTAATTCATAAGACAATTCACACTGGGGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAACCTTCCATCA  2811

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2812  CAATTCAGTCCTTGTAATTCATAAAACAATTCATACTGGAGAGAAACAAGCGTAATGAATGTGGCGAGGTTTTC  2885

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2886  AATCAACAAGCACACGTTGCACGTCATCATAGAATTCATACTGGAGAGAAACCTTAGAAATGTGAAGAATGTGA  2959

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2960  CAAAGTTTACAGTCGCAAATCAAACCTCGAAAGACAGGAGAATTCATACTGGAGAGAAACCATAAAAATGTAAG  3033

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3034  AGTTTTTGACAAGGCTTTCGGACGTGATTCACACCTGGCACAACATCCCAGAGTTCACACTGGAGAGAAACCTT  3107

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3108  ACAAGTGTAATGAGTGTGTCAAAGCCTTTAGTGGGCAGTCAACACTTATTCACCATCAGGCAATCCGTAGTGTA  3181

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3182  GGGAAACTTGACTAACGTAATGATTCTCACAACGTCTTCAGTAATGCTACAACCATTGTAAATCACTGGAGAAG  3255

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3256  CCATAATGAAGAGAGATCTTACAAATGTAATAATTGTGGCAAATTTTTCAGACATCGTTCATACATTGCCGTTC  3329

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3330  ATTGGCGAACTCATGCTGGAGAGAAATCTTACAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTT  3403

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3404  TTGCAAAACAGGAGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATCGTGGCAAAGCCTTTACTTCACA  3477

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3478  TTCTCACCTCATTAGACATCAGAGAATCCATACTGGACAGAAATCTTACAAATGTCATCAGTGTGGCAAGGTCT  3551

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3552  TCAGTCCGACTTCACTCCTTGCAGAATATCAGAAAATTCATTTTTCAGGATTTCTATGATGACTGGATTTTGAA  3625

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3626  TTTTGTGGAACGCTTTTTCTCCATCTACTAAGGTGATGTGGTTTTAATCTTTCATTCTGTTCTAGTGGTATATA  3699

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3700  ACATTGATTTGCTTGAATATGTTGAACCATCCTTGCATCCCAGAAATAACTGGCACTTGAATATCTACATTTTT  3773

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3774  TTAATATCCTCTTGAATACAGTTTTCTAGGACAAGGGATCTTCAAGAAGTTCTGGAAAAATACATATTATGAGA  3847

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3848  AAATTGTGCATGAATTTCACAATTTTTGCACCAAAATAAACTAGTGCTAGTCTGTTATAACATGTCTGAACAGG  3921

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3922  CTCTAGTTTGATGCCCTCAAAAGGATAAGACATGAGTATAAAAAGAGACTCCATCAAAGCAATATAAATTCTGA  3995

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3996  TGAAATTTAAACAAGAAGAAACATTAAATTTATGATGAGACCAGATGCAGTGGCTCAGGCCTGTAATCCCAGCA  4069

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4070  TTTTCAGAGGCTGAGACAGGTGGGCCACATGAGCCCAGGTATTCAAGACCAGCCTGGGAAACGTGGGGAAATCC  4143

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4144  CCTTTTCTACAAAAAATACAAAAATTAGCTGGGCATGGTGGCACATGCCTGCCGTCTCAGTTATTGTGAAGTCT  4217

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4218  GTGCAGGGAGGATGGCATGAACCTGGGAGGTCAAGATTGCAGTGAGCTATGATCATGCCACTGCACTCCAGCAT  4291

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4292  GGGTGATGGAGAGAGATACTGTCTTAAAAAAAGAATACTTGTGGTAACGTTTGGGTAGAGGAATAATGAAATCA  4365

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4366  TTGATGCTTTATAAAAAGGTTATGGGGACAATGCCCAAAAGAAATAAACAGTTTGTAAACGGATAACTTATTTT  4439

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4440  GAGTTAGGGCAAGACAATGTTGACAGTGATGCATGAAGCAGCAGGCAGACCTTCCACATCATTTTTACAGAAAA  4513

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4514  AAAAATTAATCTTGTTCATGCTGCAATGAAGAGGACTGACAGCAAACAGCAGAAACATAGTCAGAATTTAGAGA  4587

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4588  ACAGCCTGGTTAACATGGTGAAACACCATCTCTAGTAAAAATACAAAAATTAGCTCAGCATGGTGGCATGCGCC  4661

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4662  TGTAATCCCAGCTACTCAGGAGGCTGAGGCAGGGGAATCTCTTGAACCCAGGAGGTGGAGGATGCAGTGAACTG  4735

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4736  AGATGGCAACATTACACTCTAGCCTGAGCAACAAGAGCAAAACTCCATCTCAAAAAAAAAAAAATTGTCAAGTT  4809

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4810  CCTTCTCTTCCATTCTTTGCCATCGTGGTGTGTGCTTGACTCTGCTTCTTGCCACATCTTCTCAGAAGACTTTC  4883

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4884  AGGATTAAGCGATTCCTGGCCAAGAAACAAAAGCAAAACCATCCCACTCCCCTGTGGATTCAGATCAAAACTGG  4957

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4958  TAATAAAATCAGGTACGACTCCAAAAGGAGACATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCATGTG  5031

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 5032  AGATGGCACACATATTTATGCTGTCTGAGCATCACAATCACGTTACCATATCAAGCTGAAAATGTCACCACTAT  5105

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 5106  CTGGACAGTTGGACATGTTTTATTGGGAATATGTTTTTTCTCTGTAAATTTGTTATAAACGCATTGGTTGGCTG  5179

Query  493  -----------------------------------------  492
                                                     
Sbjct 5180  TGTTCAGTAATAAACGTGAGACTTTTCATTTCAAAACAAAA  5220

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