Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
NR_163139.1
Aligned Length:
4925
Identities:
443
Gaps:
4435

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGACCAGGAAGCGGATCCCGTGGAATGACGGTGACGCCGCGGCGGGCGGATTGACTTCTAAAGAATCTTGGTAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTGAGGAAGAAACCCAGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCCTCAGGGACTCATCCAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGCCAAGGAAGTCCTCACTGACTCTTTGAGAACTCTATATATGCAAACCCTTTGGGATGGCCACTAAATTTGTC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ACAGAGTATGGTAACGTGGTTGACTGAACCACAGCCATGAAAGTGAGCTTCCAGCTCTTCTGCTGTTGCACCGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGTCCACATTGCCAGCATTGATGGAACGGGCATCAGCCTCCATCTTCTCCTCAATGGACGTGATCACTGGGCCA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCATTGCCTGGAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATTTTCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAATT  592

Query    1  -----------------------------------------------------ATGATGAAGGAGTTCTCATCC  21
                                                                 |||||||||...||||..||.
Sbjct  593  CTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAATGCATGATGAAGACATTCTTCTCA  666

Query   22  ACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATTT  95
            ||||.|||||||||||||||||.|.|||||||||||||||||||||||||.|.|||||||||||||.|||||||
Sbjct  667  ACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGATTT  740

Query   96  TTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCACG  169
            ||||||||||.|||||||||||||.||||||..|||..|||||||||||.|||||||.||||..||||..||.|
Sbjct  741  TTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTTTCAGTGGAAAGAAGATGAAACAAATGACCATG  814

Query  170  AAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGACCGACATGATCAAAGGCATGCTGGAAACAAG  243
            .|||||||||||||||||||||||||||||||||||||||||.||.||||||||||||||||||||||||||||
Sbjct  815  CAGCACCCATGACAGAAATCAAAGAGTTGACTGGTAGTACAGGCCAACATGATCAAAGGCATGCTGGAAACAAG  888

Query  244  CCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGAATGGAA  317
            |.||||||||||||||||||||..||||||||||||||||||||||||||.||||||||||||||||||.||||
Sbjct  889  CATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCTGCCTGAACTGCACATATTTCAGCCTGAAGGGAA  962

Query  318  AATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAGTC  391
            |||||||||||||||||||||||||||||.||||||.||||.|.|||..||||||||||||||||.||||||.|
Sbjct  963  AATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCTCAGTTTCAACATCCCAAAGAATTTGTTGTAGGC  1036

Query  392  CCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAA-G  464
            |||||||||.||||||||||||.|||||.|||||||||||||||||||||||||.||.|||||||  .|||| |
Sbjct 1037  CCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTCCATTCTTCATTACTCACACAAAAA--CGGAATG  1108

Query  465  TACACATGAGAGAAAAATCTTTCCAATG----------------------------------------------  492
            ||||||||||||||||||||||||||||                                              
Sbjct 1109  TACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAAATCCTTTAATTGTAGCTCACTTTTAAAAAAA  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  CATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATGTATATGGCAAGGTATTTAATCAGAAGCGATA  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  CCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGATCTTTGGTC  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  ACAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGACAAACCTTATGAATGTGAAGAATGTGACAAA  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  GTTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTTATACTGGAGGGAAACCATACAAATGTAAGGT  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  TTGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACATACTATAATTCACACTGGAGAGAAACCTTACA  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  AGTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCTTGCACGCCATCGTAGGCTTCATACTGGAGAG  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  AAACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCAAATCACATCTTGAAAGACATAAGAGGATTCA  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  TACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTTGCATATAATTCATACCTGGCAAAACATA  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  GTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAACTCTT  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  GCACGCCATCATAGACTTCATACTGCAGAGAAACCATACAAATGTGAAGAATGTGACAAAGTTTTCAGGTGCAA  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  ATCACACCTTGAAAGACATAGGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTT  1996

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1997  TCCGGAGTGATTCATGCCTTACAGAACATCAGAGAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGT  2070

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2071  GGCAAGGTTTTTAGTACAAAAGCAAACCTTGCATGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATG  2144

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2145  TGAAGAATGTGAGAAAGTTTTCAGTCGCAAATCACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAAC  2218

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2219  CGTACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACT  2292

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2293  GGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAG  2366

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2367  GCTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTAT  2440

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2441  ACCATCATAGGCTTCATAGTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCA  2514

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2515  CACCTTGCACAGCATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAG  2588

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2589  TCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTGAAAGTGTAATGAGTGTGGCA  2662

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2663  AGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACTTCATAGTGGAGAGAAACCTTAAAAGTGTAAT  2736

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2737  GAGTGTGGCAACACCTTCCATCACAATTCAACCCTTGTAAGTCACAAAGCCATTCATACTGGAGAGAAACTTTA  2810

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2811  CAAGTGTAATGAATGTGGCAAGGTTTTTAATCAAAAAACAACCCTTGCACGTCATCATAGAATTCATACTGCAG  2884

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2885  AGAAACTTTACAAATAGGAAGAATGTGACAAAGTTTTCGGTTGCAAATCAAACCTTGAAACACATAAGAAAATG  2958

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2959  CATGCTGAAGAGAAACCACACAGATGTAAGGTTTATGACAAGATTTTTGAATATAATTCATACCTGGCAAAACA  3032

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3033  TATTAGAATTCAAACTGGAGAGAAACCTTACAAATGTGATGAGTGTGGCAACACCTTTGGTCAAAATTCATACC  3106

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3107  TTGTAATTCAAAAGGCAATTCGTATTGGAGAGAAACCCTACAAGTGTAATGAATGTGGCATAGTTTTTAATCAA  3180

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3181  CAGTCACACCTTGCAAGTCATCATAGTCTTCATACTGCAGAGAAATCTTACAAATGTGAAGACTGTGACAAAGT  3254

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3255  TGTCAGTCACAAATCACAGCTTGAAAGACAGGAGAATTCATACTGGAGAAAAAACATACAAATGTAAGGTTTGT  3328

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3329  AACAAGGCTTTTGGGAGTGATTCACACCTGGCACACCATACTAGAATTCACACTGGAGAGAAACCTTACAAGTG  3402

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3403  CAATGAGTGTGGCAAAGCCTTTAGTGGGCAGTCACCACTTATTCACCATCAAGCAATCCATAGTATAGGGAAAC  3476

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3477  TTGACTAATATAATGATTGTCACAAAGTTTTCAGTAATGCTACAACCATTGCAAATCATTGGAGAATCCATAAT  3550

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3551  GAGAGATCTTACAAGTGTAATAAATGTGACAGATTTTTCAGATATCGTTCATATATTGCTATTCATCATCGAAC  3624

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3625  TCATGCTGGAGAGAAACCTTATAAATGTCATGATTGTGGCAAGGTCTTCAGTCAAGTTTCATCCTATGCAAAAC  3698

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3699  ATAGGAGGATTCATACAGGAGAGAAACTCACAAGTGTGATGATTGTGGCAAAGCGTTTACTTCACATTCACACC  3772

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3773  TCAATAGACATCAGAGAATCCATGCTGGACAGAAATCTTACAAATGTCATCAGTGTGGTAAGGTCTTCAGTCCG  3846

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3847  AGATCACTCCTTGCAGACCATCAGACAATTCCTTTTGGAGACAGTTGTTTCAAATGCCATTAGTATAGCAAGCC  3920

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3921  ATCAAGCATTAATTGACATTACAGTTAAATGAGCACTGACCTGAGTTTGAGTTGACTTAACATTGAGTTTAAGC  3994

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3995  ATTAATTGACATTAAACTGTTTATGTTAAGAGGACTGGGCTGGGCACTGTGGCTCACGCCTGCAATGCCAGCAC  4068

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4069  TTTGAGAGGCCAAGACTGGTAGGTCACTGGAGGTTAAGAGTTTGAGAACAGCCTGGCCAACAGACGGGAGCCAC  4142

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4143  TTTTCCCAGCCTGTGTTTTCATTTCTATTCTTTCTTTCTTTTTTCTTTTTTTTGTTTTTGTTTTTGAGATGGAG  4216

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4217  TCTCTTGCTCTGTCATCCAGGTTGGAGTGCAGTGGCATGATCTTGACTCACTACAACCTCCGCCTCCCAGGTTC  4290

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4291  AAGCGATCCTCCTGCCTCAGTCTCCTGACTAGCTGGGACTACAGGTGCATGCCACCACACCTGGATAATTTTTT  4364

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4365  GTATTTTTAGTAGAGACTGGGTTTCGCTGTGTTAGCCTGGATGGTCTCGATTTTCTGATCTTATGATTCACCCA  4438

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4439  CCTCTACCTCCCGAAGTGCTGAGATTATGGGCGTGAGCCACCGTGACTGGCCTGTTTTTTGTTTCTTTAACAAA  4512

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4513  AAGTTATGGGGATTTCTATGAGTATTGTGTTGAATCTAAATCACATTCGGTTATATAATCATTGAGCAATACTA  4586

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4587  ATTTTTCCAATCAGTATGGATTGTATGTGTATTTATATGTTTTTAATCATTTTGATCAATGTTTGTAGATTTCA  4660

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4661  AGGTACAAACTTCTCACCTTTATATGTTTATTCCTAAATATTTCTTACTTTAAGCTCTTTAGCAAATGGAAGTG  4734

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4735  GTTTTTAATTTTATTTTAAAATTATTTAATGTTAATGTATGGAAATTCAACTAATTTTTGGTGCTATTATTCTA  4808

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 4809  TTCTGCAAATACACTGAATATGTTTATTAGTTCCAGTTGTATTTTGGTTGACTGTGATTTTCTTCACAGATCAT  4882

Query  493  -----------------------------------------  492
                                                     
Sbjct 4883  GTCATCTACAAACAAATAAAATTTGACTTCTTTCTTTCTGA  4923

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