Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_05629
Subject:
XR_001753716.2
Aligned Length:
3787
Identities:
432
Gaps:
3297

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  222

Query    1  ------------------------------------------------------ATGATGAAGGAGTTCTCATC  20
                                                                  |||||||||..|||||||||
Sbjct  223  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  296

Query   21  CACAGCGCAAGGCAATACAGAAGTGATCCACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATT  94
            .||||..||||||||||||||||||.|||||||||||||||||||||.|||||.|||||||||||||.|||||.
Sbjct  297  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  370

Query   95  TTTGCTTCCAGGAAATTGAGAAAGATATTCATAACTTTGAGTTTCAGTGGCAAGAAGAGGAAAGGAATGGTCAC  168
            .|||||||||||||||||||||||||||||||.||||||.||||||||||||||||.|.||||..|||||.||.
Sbjct  371  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  444

Query  169  GAAGCACCCATGACAGAAATCAAAGAGTTGACTG-GTAGTACAGACCGACATGATCAAAGGCATGCTGGAAACA  241
            |||||||.|||||||.|||.||||.|||||| || ||||||||||.||||||||||||||||||||||||||||
Sbjct  445  GAAGCACTCATGACAAAAACCAAAAAGTTGA-TGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACA  517

Query  242  AGCCTATTAAAGATCAGCTTGGATCCAGCTTTCATTCGCATCTGCCTGAACTCCACATATTTCAGCCTGAATGG  315
            |.|||||||||.||.||||||||||.||||||||||||||||||||||||.|.|||||||||||.||.|||.||
Sbjct  518  AACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGG  591

Query  316  AAAATTGGTAATCAAGTTGAGAAGTCTATCATCAATGCCTCCTTAATTTTGACATCCCAAAGAATTTCTTGTAG  389
            ||||||||||||||||||||||||.||||||.|.||||.|.||.|.|||...||||||||.|||||||.|||||
Sbjct  592  AAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAG  665

Query  390  TCCCAAAACCCGTATTTCTAATAACTATGGGAATAATTCCCTCCATTCTTCATTACCCATACAAAAATTGGGAA  463
            .||.|||||.||||||||||||||.|||.|||||||||.||||||.||||||||||.||.||||||| .|||||
Sbjct  666  GCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAA-CGGGAA  738

Query  464  GTACACATGAGAGAAAAATCTTTCCAATG---------------------------------------------  492
            |||||||..||||||||||||||||||.|                                             
Sbjct  739  GTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAA  812

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  813  ACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGAT  886

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  887  ACCTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCAC  960

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct  961  AATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGT  1034

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1035  TTTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAAT  1108

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1109  GTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAA  1182

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1183  TGTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAA  1256

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1257  ACCTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATA  1330

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1331  CTGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGT  1404

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1405  AGACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGA  1478

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1479  ACGTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGTTTTTAGGCAACAGTCAAA  1552

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1553  CCTTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAAGTTTTCAAT  1626

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1627  TTCAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAA  1700

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1701  GGATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGTGTAATG  1774

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1775  AGTGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCATGGTATAGGGAAACTTGAC  1848

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1849  TAATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTGGAGAATCCATAATGAAGG  1922

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1923  AGGTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGCAGTTCATTGGCGATCTTA  1996

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 1997  TACAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTTTGCAAAACGGG  2070

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2071  AGAATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTACTTCACGTTCACACCACA  2144

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2145  TTAGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGCAAGGTCTTCAGTCCGAGG  2218

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2219  TTACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGTAATAGTTACAAATGCGGTGAGCACAGCAAACCATC  2292

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2293  AAGGATTGACAGTAGAGTCAATTCAGAATTGACTTGAGTTTGAGTTGACTTAAAACATTCAGTTGAAGCATTAA  2366

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2367  TTGACATTAAAGTGTTTATGTTAAGAGGATTGGGCCAGGCGTGTGGCTCACGCCTGTAAATCCAGCACTTTAGG  2440

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2441  AGCCCAAGGTGGATAGATCACTTGAGGTCATGAGTTTGAGATCAGCCTGGCCAACAGACGATTGATTTCCAAAG  2514

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2515  ACTCATGCTATGTAAGGAAGCCACCAAGAAGGGCAAAGAAAAGGAGCCAGGGACGGCTCTTCCTCAGGGACACT  2588

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2589  AGACTTTCAGGGATGTGGCTATAGATTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTA  2662

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2663  TACAGGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGTTTGTGGGCTTGAGTGCAAGCCACGATCTCGCCTC  2736

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2737  ACCACAACCTCCGTCTCCCGAGTTCAAGCGATTCTCCTGCCTCAGCTTCCCGAGTAGCTGGGATTACAGGTATG  2810

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2811  AACCACTATGCCCGGCTAACTTTGTTTTTTTTTTTTAGAAATTAAACCTTTTTTCAGCTTAATGACCCAGGGGT  2884

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2885  GTATTTTTGAAGGACTTGGGAGCTCTCTTTGAAAGGCAAACAACAAGGGAAACAGTACCTTTATCTCAGTAGGA  2958

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 2959  AATTAAATAATTCAAACATCAAATAACTTCAATTTAAGGCTATGGACTTTGAGATAATTCTGAGCCTTGAGAGG  3032

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3033  AATGTGGTCAGGCAACCTGAGTCCAGTGGAATGCAGGTGCAACTTCTAAGAGTTTTCCTGTAAGTAATTAAGAA  3106

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3107  GACTAAGTAGCCCCAGAGATAAGACCTCCTCGGATCATTGTCCCTTCTTATGTAGTGATAAAGTAACCTTCCTT  3180

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3181  GAAGTGTATCTATCCGTAATCAATCAAGTTGCTGCAGCCTATGCACTGGCCCAGAATAAAAAACGTGGTGATTC  3254

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3255  TGCTAAAGCTTCTCTGTCTTTCCCTGTGTGTGAAATCTTAACGTCTCTACTTGGGAACGCTGATCCCATTCATT  3328

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3329  TAGAGTTGATGTTTCCACGTGGCTATTTCCAAGCTTTGCCTTCAAATAAATTCTGTACTTAATCATATATTCTA  3402

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3403  AATTTTATTATTTACTGCTGACATCAGTTTCTGTCGGATTGTAGGAGCCTCACCAGAGAGGGCCCCTGTCGCCA  3476

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3477  TGTTGTAAAACTCACACTTGCCAAAAGTTGTGGGTTAGGGTTTCTCCCCCTCCCTCAGGATGACGCTAGTTAGC  3550

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3551  TGACACAGATGGTCACCTCCATTACCAAGTAGAGTCAGGATGAACTATGTGTGACTGTTCAACTATGTGTCCTC  3624

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3625  TTCCCTGAGGACTGATTAGTGTTTATCTTGAAAACATGTCCTTAATGGGTTGTATAGAACACTGAAGCATCTGA  3698

Query  493  --------------------------------------------------------------------------  492
                                                                                      
Sbjct 3699  TTTCAAACTCTTAGCTCTTTTCCTCTATTTCCCATCACATTCTGGTCTAAGGCTTATTTATTAATAAAATGATT  3772

Query  493  -------------  492
                         
Sbjct 3773  TTTATTTCTTTAT  3785

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