Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_06739
Subject:
NM_011122.3
Aligned Length:
2188
Identities:
1882
Gaps:
11

Alignment

Query    1  ATGCGGCCCCTGCTGCTACTGGCCCTGCTGGGCTGGCTGCTGCTGGCCGAAGCGAAGGGCGACGCCAAGCCGGA  74
            ||||||.||||||||||.|||||||.|.|||.||||||.||.||||.|.|.|||||||..||||||||||..||
Sbjct    1  ATGCGGTCCCTGCTGCTCCTGGCCCCGTTGGCCTGGCTTCTTCTGGTCCAGGCGAAGGATGACGCCAAGCTAGA  74

Query   75  GGACAACCTTTTAGTCCTCACGGTGGCCACTAAGGAGACCGAGGGATTCCGTCGCTTCAAGCGCTCAGCTCAGT  148
            ||||||||||.|.||||||||.||||||||.||.|||||.|||||.|||||.|||||||||||.||||||||||
Sbjct   75  GGACAACCTTCTGGTCCTCACTGTGGCCACAAAAGAGACTGAGGGCTTCCGCCGCTTCAAGCGTTCAGCTCAGT  148

Query  149  TCTTCAACTACAAGATCCAGGCGCTTGGCCTAGGGGAGGACTGGAATGTGGA--GAAGGGGAC-----GTCGGC  215
            ||||||||||||||||||||.|.||.|||||.|||||||||||||.||||||  ||   ||||     | |.||
Sbjct  149  TCTTCAACTACAAGATCCAGTCACTGGGCCTGGGGGAGGACTGGAGTGTGGATGGA---GGACCAGCAG-CAGC  218

Query  216  AGGTGGAGGGCAGAAGGTCCGGCTGCTGAAGAAAGCTCTGGAGAAGCACGCAGACAAGGAGGATCTGGTCATTC  289
            |||||||||.||||||||.||||||||||||||.||.|||||.|||||||||||||||||.||.|||||.||||
Sbjct  219  AGGTGGAGGACAGAAGGTTCGGCTGCTGAAGAAGGCACTGGAAAAGCACGCAGACAAGGAAGACCTGGTTATTC  292

Query  290  TCTTCACAGACAGCTATGACGTGCTGTTTGCATCGGGGCCCCGGGAGCTCCTGAAGAAGTTCCGGCAGTCCAGG  363
            |||||...|||||.|||||||||.|||||||.|||||.||||||||.|||.|.||||||||||.||||.|||.|
Sbjct  293  TCTTCGTTGACAGTTATGACGTGGTGTTTGCCTCGGGACCCCGGGAACTCTTAAAGAAGTTCCAGCAGGCCAAG  366

Query  364  AGCCAGGTGGTCTTCTCTGCTGAGGAGCTCATCTACCCAGACCGCAGGCTGGAGACCAAGTATCCGGTGGTGTC  437
            |||||||||||||||||.||.|||||||..||||||||.|||||.|||||||||.||||||||||....||..|
Sbjct  367  AGCCAGGTGGTCTTCTCCGCAGAGGAGCATATCTACCCGGACCGGAGGCTGGAGGCCAAGTATCCCACAGTCCC  440

Query  438  CGATGGCAAGAGGTTCCTGGGCTCTGGAGGCTTCATCGGTTATGCCCCCAACCTCAGCAAACTGGTGGCCGAGT  511
            |||.||||||.|||||||||||||||||||||||||.|||||||||||||.|||||||||||||||||||||||
Sbjct  441  CGACGGCAAGCGGTTCCTGGGCTCTGGAGGCTTCATTGGTTATGCCCCCAGCCTCAGCAAACTGGTGGCCGAGT  514

Query  512  GGGAGGGCCAGGACAGCGACAGCGATCAGCTGTTTTACACCAAGATCTTCTTGGACCCGGAGAAGAGGGAGCAG  585
            ||||.|||||||||||.||||||||.|||||.|||||.|||||||||||||||.|||||||||||||||||||.
Sbjct  515  GGGAAGGCCAGGACAGTGACAGCGACCAGCTCTTTTATACCAAGATCTTCTTGAACCCGGAGAAGAGGGAGCAA  588

Query  586  ATCAATATCACCCTGGACCACCGCTGCCGTATCTTCCAGAACCTGGATGGAGCCTTGGATGAGGTCGTGCTCAA  659
            ||||||||||.|||||||||.||||||||.||||||||||||||||||||||||||||||||.||.||||||||
Sbjct  589  ATCAATATCAGCCTGGACCATCGCTGCCGAATCTTCCAGAACCTGGATGGAGCCTTGGATGAAGTTGTGCTCAA  662

Query  660  GTTTGAAATGGGCCATGTGAGAGCGAGGAACCTGGCCTATGACACCCTCCCGGTCCTGATCCATGGCAACGGGC  733
            |||||||||||||||.||||||||..|.||.||||||||||||||||||||.||..|..|.||||||||.||||
Sbjct  663  GTTTGAAATGGGCCACGTGAGAGCACGAAATCTGGCCTATGACACCCTCCCAGTGGTCGTTCATGGCAATGGGC  736

Query  734  CAACCAAGCTGCAGTTGAACTACCTGGGCAACTACATCCCGCGCTTCTGGACCTTCGAAACAGGCTGCACCGTG  807
            |.||||||||||||.||||||||||||||||||||||.||.||.||||||||||||||.||.||||||||||||
Sbjct  737  CCACCAAGCTGCAGCTGAACTACCTGGGCAACTACATTCCTCGATTCTGGACCTTCGAGACGGGCTGCACCGTG  810

Query  808  TGTGACGAAGGCTTGCGCAGCCTCAAGGGCATTGGGGATGAAGCTCTGCCCACGGTCCTGGTCGGCGTGTTCAT  881
            ||||||||.|||.|.||.|||||||||||||||||||||||||||||.|||||.|||||||||||.||||||||
Sbjct  811  TGTGACGAGGGCCTACGGAGCCTCAAGGGCATTGGGGATGAAGCTCTCCCCACTGTCCTGGTCGGTGTGTTCAT  884

Query  882  CGAACAGCCCACGCCGTTTGTGTCCCTGTTCTTCCAGCGGCTCCTGCGGCTCCACTACCCCCAGAAACACATGC  955
            .||.||||||||.||.|||.|.|||.||||.||||.||||||.|||||.||.|..|||||.||||||||.||||
Sbjct  885  TGAGCAGCCCACACCATTTCTATCCTTGTTTTTCCTGCGGCTGCTGCGCCTACGATACCCTCAGAAACAGATGC  958

Query  956  GACTTTTCATCCACAACCACGAGCAGCACCACAAGGCTCAGGTGGAAGAGTTCCTGGCACAGCATGGCAGCGAG  1029
            |.||.|||||.||||||||.||.|.|||||||||...||||||.||..||||||||||..||||.|||||.|||
Sbjct  959  GGCTCTTCATTCACAACCAGGAACGGCACCACAAACTTCAGGTAGAGCAGTTCCTGGCGGAGCACGGCAGTGAG  1032

Query 1030  TACCAGTCTGTGAAGCTGGTGGGCCCTGAGGTGCGGATGGCGAATGCAGATGCCAGGAACATGGGCGCAGACCT  1103
            |||||||||||||||||.|||||.|||||||||||.|||||.||.||.||.|||||||||||||||||||||||
Sbjct 1033  TACCAGTCTGTGAAGCTAGTGGGTCCTGAGGTGCGCATGGCCAACGCCGACGCCAGGAACATGGGCGCAGACCT  1106

Query 1104  GTGCCGGCAGGACCGCAGCTGCACCTACTACTTCAGCGTGGATGCTGACGTGGCCCTGACCGAGCCCAACAGCC  1177
            ||||||.|||||||..|..|||||||||||||||||.|||||||||||.|||||.|||||.|||||.|||||||
Sbjct 1107  GTGCCGTCAGGACCAAACTTGCACCTACTACTTCAGTGTGGATGCTGATGTGGCTCTGACGGAGCCGAACAGCC  1180

Query 1178  TGCGGCTGCTGATCCAACAGAACAAGAACGTCATTGCCCCGCTGATGACCCGGCATGGGAGGCTGTGGTCGAAC  1251
            |..||||.|||||..||||.||||||||.||||||||.||.||.||||||||.||.||||||||.|||||.|||
Sbjct 1181  TAAGGCTCCTGATTGAACAAAACAAGAATGTCATTGCGCCACTCATGACCCGCCACGGGAGGCTCTGGTCCAAC  1254

Query 1252  TTCTGGGGGGCTCTCAGTGCAGATGGCTACTATGCCCGTTCCGAGGACTACGTGGACATTGTGCAGGGGCGGCG  1325
            ||||||||||.|||.|||||||||||.|||||.|||||.||.||||||||||||||||||||||||||.||.||
Sbjct 1255  TTCTGGGGGGGTCTGAGTGCAGATGGGTACTACGCCCGCTCAGAGGACTACGTGGACATTGTGCAGGGCCGTCG  1328

Query 1326  TGTTGGTGTCTGGAATGTGCCCTATATTTCAAACATCTACTTGATCAAGGGCAGTGCCCTGCGGGGTGAGCTGC  1399
            ||||||.||||||||.|||||.||.||.||||||||||||.||||||||||||||||||||||||.|||.||||
Sbjct 1329  TGTTGGCGTCTGGAACGTGCCTTACATCTCAAACATCTACCTGATCAAGGGCAGTGCCCTGCGGGCTGAACTGC  1402

Query 1400  AGTCCTCAGATCTCTTCCACCACAGCAAGCTGGACCCCGACATGGCCTTCTGTGCCAACATCCGGCAGCAGGAT  1473
            ||..|..|||.||.||||||.|||||||||||||..||||||||...|||||.|||||..||||.||||||||.
Sbjct 1403  AGAACGTAGACCTTTTCCACTACAGCAAGCTGGATTCCGACATGAGTTTCTGCGCCAATGTCCGACAGCAGGAG  1476

Query 1474  GTGTTCATGTTCCTGACCAACCGGCACACCCTTGGCCATCTGCTCTCCCTAGACAGCTACCGCACCACCCACCT  1547
            ||||||||||||||||||||||||||||||.|||||||.|||||.|||||.||.|.|||||..|||||||||||
Sbjct 1477  GTGTTCATGTTCCTGACCAACCGGCACACCTTTGGCCACCTGCTTTCCCTGGATAACTACCAGACCACCCACCT  1550

Query 1548  GCACAACGACCTCTGGGAGGTGTTCAGCAACCCCGAGGACTGGAAGGAGAAGTACATCCACCAGAACTACACCA  1621
            .||.||.||.|||||||||||||||||||||||.|||||||||||.||.|||||||||||..||||.|||||||
Sbjct 1551  ACATAATGATCTCTGGGAGGTGTTCAGCAACCCTGAGGACTGGAAAGAAAAGTACATCCATGAGAATTACACCA  1624

Query 1622  AAGCCCTGGCCGGGAAGCTGGTGGAGACGCCCTGCCCGGATGTCTATTGGTTCCCCATCTTCACGGAGGTGGCC  1695
            |.||||||||.||||||||||||||||||||.||.|||||||||||.||||||||||||||||||||||.||||
Sbjct 1625  AGGCCCTGGCGGGGAAGCTGGTGGAGACGCCTTGTCCGGATGTCTACTGGTTCCCCATCTTCACGGAGGCGGCC  1698

Query 1696  TGTGATGAGCTGGTGGAGGAGATGGAGCACTTTGGCCAGTGGTCTCTGGGCAACAACAAGGACAACCGCATCCA  1769
            ||||||||||||||||||||||||||.||||.||||||||||||||||||..|.||.|||||||||||.|||||
Sbjct 1699  TGTGATGAGCTGGTGGAGGAGATGGAACACTATGGCCAGTGGTCTCTGGGTGATAATAAGGACAACCGGATCCA  1772

Query 1770  GGGTGGCTACGAGAACGTGCCGACTATTGACATCCACATGAACCAGATCGGCTTTGAGCGGGAGTGGCACAAAT  1843
            ||||||||||||.||||||||.|||||.||||||||.||||||||||||..|||.|||||||||||||||||.|
Sbjct 1773  GGGTGGCTACGAAAACGTGCCCACTATCGACATCCATATGAACCAGATCACCTTCGAGCGGGAGTGGCACAAGT  1846

Query 1844  TCCTGCTGGAGTACATTGCGCCCATGACGGAGAAGCTCTACCCCGGCTACTACACCAGGGCCCAGTTTGACCTG  1917
            |||||.||||||||||.||.||||||||.||||||||.|||||.|||||||||||.||||||||||||||.||.
Sbjct 1847  TCCTGGTGGAGTACATCGCCCCCATGACAGAGAAGCTGTACCCTGGCTACTACACTAGGGCCCAGTTTGATCTA  1920

Query 1918  GCCTTTGTCGTCCGCTACAAGCCTGATGAGCAGCCCTCACTGATGCCACACCATGATGCCTCCACCTTCACCAT  1991
            |||||.|||||||||||.|||||.|||||||||||.||..|||||||.||||||||.|||||.|||||||||.|
Sbjct 1921  GCCTTCGTCGTCCGCTATAAGCCCGATGAGCAGCCTTCCTTGATGCCCCACCATGACGCCTCTACCTTCACCGT  1994

Query 1992  CAACATCGCCCTGAACCGAGTCGGGGTGGATTACGAGGGCGGGGGCTGTCGGTTCCTGCGCTACAACTGTTCCA  2065
            ||||||.|||||||||.|.||.||||..|||||.||||||||.||.||.||.||.||||||||||||||.|||.
Sbjct 1995  CAACATAGCCCTGAACAGGGTTGGGGAAGATTATGAGGGCGGAGGTTGCCGATTTCTGCGCTACAACTGCTCCG  2068

Query 2066  TCCGAGCCCCAAGGAAGGGCTGGACCCTCATGCACCCTGGACGACTCACGCATTACCATGAGGGGCTCCCCACC  2139
            |..|.||.|||||||||||||||.|||||.|||||||.||.||.|||||.||.||.||.||||||||.||.||.
Sbjct 2069  TGAGGGCACCAAGGAAGGGCTGGGCCCTCCTGCACCCCGGGCGGCTCACACACTATCACGAGGGGCTTCCTACT  2142

Query 2140  ACCAGGGGCACCCGCTACATCGCAGTCTCCTTCGTCGATCCC  2181
            ||||.||||||.||||||||.||.||.||.||||||||||||
Sbjct 2143  ACCAAGGGCACGCGCTACATTGCTGTGTCTTTCGTCGATCCC  2184

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