Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07005
Subject:
NM_005418.3
Aligned Length:
3411
Identities:
3407
Gaps:
0

Alignment

Query    1  ATGGCCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCT  74
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGACCATGACTGCCAACAAGAATTCCAGCATCACCCACGGAGCTGGTGGCACTAAAGCCCCTCGGGGGACTCT  74

Query   75  GAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTCTCTCCCCACCAAGGAGTCCCATCTACCCGCTCAGTGATA  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  GAGCAGGTCTCAGTCAGTCTCTCCACCTCCAGTTCTCTCCCCACCAAGGAGTCCCATCTACCCGCTCAGTGATA  148

Query  149  GTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCCAGCTCCCGGGTGCTCCTCAAGGACCGGCACCCCCCAGCT  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GTGAAACCTCAGCCTGCAGGTACCCCAGCCACTCCAGCTCCCGGGTGCTCCTCAAGGACCGGCACCCCCCAGCT  222

Query  223  CCTTCACCCCAGAATCCTCAAGATCCCTCCCCAGATACTTCCCCACCCACCTGTCCCTTCAAGACCGCCAGCTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCTTCACCCCAGAATCCTCAAGATCCCTCCCCAGATACTTCCCCACCCACCTGTCCCTTCAAGACCGCCAGCTT  296

Query  297  CGGTTATTTGGACAGAAGCCCTTCGGCGTGCAAGAGAGACGCCCAAAAGGAAAGTGTCCAAGGCGCAGCCCAGG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CGGTTATTTGGACAGAAGCCCTTCGGCGTGCAAGAGAGACGCCCAAAAGGAAAGTGTCCAAGGCGCAGCCCAGG  370

Query  371  ATGTAGCAGGGGTCGCTGCCTGCCTCCCCCTTGCCCAGAGCACGCCATTCCCGGGGCCAGCAGCTGGCCCCCGG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  ATGTAGCAGGGGTCGCTGCCTGCCTCCCCCTTGCCCAGAGCACGCCATTCCCGGGGCCAGCAGCTGGCCCCCGG  444

Query  445  GGCGTCTTGCTGACCCGTACCGGTACCCGCGCCCACAGCCTGGGCATCCGGGAGAAGATATCAGCATGGGAAGG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGCGTCTTGCTGACCCGTACCGGTACCCGCGCCCACAGCCTGGGCATCCGGGAGAAGATATCAGCATGGGAAGG  518

Query  519  TCGCCGAGAGGCGTCGCCCAGGATGAGCATGTGTGGAGAGAAGCGGGAGGGCTCTGGGAGCGAGTGGGCGGCCA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  TCGCCGAGAGGCGTCGCCCAGGATGAGCATGTGTGGAGAGAAGCGGGAGGGCTCTGGGAGCGAGTGGGCGGCCA  592

Query  593  GTGAGGGCTGCCCCAGCCTGGGCTGTCCCAGCGTGGTGCCGTCCCCCTGCAGCTCTGAAAAGACCTTTGATTTC  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTGAGGGCTGCCCCAGCCTGGGCTGTCCCAGCGTGGTGCCGTCCCCCTGCAGCTCTGAAAAGACCTTTGATTTC  666

Query  667  AAGGGCCTCCGGAGGATGAGCAGGACCTTCTCCGAGTGTTCCTACCCAGAGACTGAGGAGGAGGGAGAGGCGCT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AAGGGCCTCCGGAGGATGAGCAGGACCTTCTCCGAGTGTTCCTACCCAGAGACTGAGGAGGAGGGAGAGGCGCT  740

Query  741  CCCTGTCCGGGACTCTTTCTACCGGCTGGAGAAACGGCTGGGCCGGAGTGAGCCCAGCGCCTTCCTCAGGGGGC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CCCTGTCCGGGACTCTTTCTACCGGCTGGAGAAACGGCTGGGCCGGAGTGAGCCCAGCGCCTTCCTCAGGGGGC  814

Query  815  ATGGCAGCAGGAAGGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAAATTGAACAGGTCCTGAAGGAGCAGCCG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGGCAGCAGGAAGGAGAGCTCAGCAGTGCTGAGCCGGATCCAGAAAATTGAACAGGTCCTGAAGGAGCAGCCG  888

Query  889  GGCCGGGGGCTCCCCCAGCTCCCCAGCAGCTGCTACAGCGTGGACCGGGGGAAAAGGAACACTGGAACCTTGGG  962
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Sbjct  889  GGCCGGGGGCTCCCCCAGCTCCCCAGCAGCTGCTACAGCGTGGACCGGGGGAAAAGGAAGACTGGAACCTTGGG  962

Query  963  CTCCTTGGAGGAGCCGGCAGGGGGCGCGAGTGTGAGCGCTGGCAGCCGGGCAGTCGGAGTGGCTGGTGTTGCGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CTCCTTGGAGGAGCCGGCAGGGGGCGCGAGTGTGAGCGCTGGCAGCCGGGCAGTCGGAGTGGCTGGTGTTGCGG  1036

Query 1037  GGGAGGCGGGCCCACCCCCAGAGAGGGAAGGCAGTGGTTCCACTAAGCCCGGGACCCCTGGAAATAGCCCTAGC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGGAGGCGGGCCCACCCCCAGAGAGGGAAGGCAGTGGTTCCACTAAGCCCGGGACCCCTGGAAATAGCCCTAGC  1110

Query 1111  TCCCAGCGGCTGCCATCGAAGAGTTCCCTCGATCCCGCTGTGAACCCTGTCCCCAAACCCAAGCGCACCTTTGA  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TCCCAGCGGCTGCCATCGAAGAGTTCCCTCGATCCCGCTGTGAACCCTGTCCCCAAACCCAAGCGCACCTTTGA  1184

Query 1185  ATACGAGGCTGACAAGAACCCCAAGAGTAAGCCCAGTAATGGTCTACCTCCTTCACCCACACCTGCTGCTCCAC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  ATACGAGGCTGACAAGAACCCCAAGAGTAAGCCCAGTAATGGTCTACCTCCTTCACCCACACCTGCTGCTCCAC  1258

Query 1259  CTCCCTTGCCCTCCACCCCAGCCCCGCCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGCAAGTCC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTCCCTTGCCCTCCACCCCAGCCCCGCCAGTCACCCGGAGACCCAAGAAGGACATGCGTGGTCACCGCAAGTCC  1332

Query 1333  CAGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCACTGAGAA  1406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  CAGAGCAGAAAATCCTTTGAGTTTGAGGATGCATCCAGTCTCCAGTCCCTGTACCCCTCTTCTCCCACTGAGAA  1406

Query 1407  TGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGATATTGTGGGAG  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TGGTACTGAGAACCAACCCAAGTTTGGATCCAAAAGCACTTTAGAAGAAAATGCCTATGAAGATATTGTGGGAG  1480

Query 1481  ATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAAAATCCCAGCAACTG  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATCTGCCCAAGGAGAATCCATATGAGGATGTGGACTTAAAGAGCCGAAGAGCAGGACGAAAATCCCAGCAACTG  1554

Query 1555  TCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTACAACAGCCCGCCCACACA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCTGAGAACTCCTTGGACTCTTTGCACAGGATGTGGAGTCCTCAGGACAGGAAGTACAACAGCCCGCCCACACA  1628

Query 1629  GCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCACCGGCTGCCAC  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GCTTTCCCTGAAACCCAACAGCCAGTCCCTGCGCAGTGGGAACTGGTCAGAAAGGAAGAGCCACCGGCTGCCAC  1702

Query 1703  GATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGCTGAGTCTGCCGTCCTCACCCTCCAGC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GATTACCCAAGAGGCACAGCCATGACGACATGCTGCTGCTGGCTCAGCTGAGTCTGCCGTCCTCACCCTCCAGC  1776

Query 1777  CTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAGCCGCCGGGCCCGCCGCATTCCCAAGCTTGT  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  CTCAATGAAGACAGCCTCAGCACCACCAGCGAGCTGCTGTCCAGCCGCCGGGCCCGCCGCATTCCCAAGCTTGT  1850

Query 1851  CCAAAGAACTAACTCCATCTACAATGCCAAGAGAGGAAAGAAGAGATTAAAAAAGTTGTCTATGTCCAGCATTG  1924
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  CCAAAGAATTAACTCCATCTACAATGCCAAGAGAGGAAAGAAGAGATTAAAAAAGTTGTCTATGTCCAGCATTG  1924

Query 1925  AAACAGCATCACTGAGAGATGAAAACAGTGAGAGCGAGAGCGACTCTGATGACAGGTTCAAAGCCCACACACAG  1998
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  AAACAGCATCACTGAGAGATGAAAACAGTGAGAGCGAGAGCGACTCTGATGACAGGTTCAAAGCCCACACACAG  1998

Query 1999  CGCCTGGTCCACATCCAGTCGATGCTGAAGCGCGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAGTG  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  CGCCTGGTCCACATCCAGTCGATGCTGAAGCGCGCCCCCAGCTATCGCACGCTGGAGCTGGAGCTGCTGGAGTG  2072

Query 2073  GCAGGAGCGGGAGCTTTTTGAGTACTTTGTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCTCC  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GCAGGAGCGGGAGCTTTTTGAGTACTTTGTGGTGGTGTCCCTCAAGAAGAAGCCATCGCGAAACACCTACCTCC  2146

Query 2147  CCGAAGTCTCCTACCAGTTTCCCAAGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCAAA  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  CCGAAGTCTCCTACCAGTTTCCCAAGCTGGACCGACCCACCAAGCAGATGCGAGAGGCAGAGGAAAGGCTCAAA  2220

Query 2221  GCCATTCCCCAGTTTTGCTTCCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTTTC  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  GCCATTCCCCAGTTTTGCTTCCCTGATGCCAAGGACTGGCTTCCTGTGTCAGAGTATAGCAGTGAGACCTTTTC  2294

Query 2295  TTTCATGCTGACTGGGGAAGATGGCGGCAGACGCTTTGGCTACTGCAGGCGCTTACTGCCAAGTGGGAAAGGGC  2368
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TTTCATGCTGACTGGGGAAGATGGCAGCAGACGCTTTGGCTACTGCAGGCGCTTACTGCCAAGTGGGAAAGGGC  2368

Query 2369  CCCGGTTGCCAGAGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGATGAG  2442
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  CCCGGTTGCCAGAGGTGTACTGTGTCATCAGCCGCCTTGGCTGCTTCGGCTTGTTTTCCAAGGTCCTAGATGAG  2442

Query 2443  GTGGAGCGCCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTTCCC  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  GTGGAGCGCCGGCGTGGGATCTCCGCTGCATTGGTCTATCCTTTCATGAGAAGTCTCATGGAGTCGCCCTTCCC  2516

Query 2517  AGCCCCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGCGGC  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  AGCCCCAGGGAAGACCATCAAAGTGAAGACATTCCTGCCAGGTGCTGGCAATGAGGTGTTAGAGCTGCGGCGGC  2590

Query 2591  CCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCATCCGA  2664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591  CCATGGACTCAAGGCTGGAGCACGTGGACTTTGAGTGCCTTTTTACCTGCCTCAGTGTGCGCCAGCTCATCCGA  2664

Query 2665  ATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCCAGCTGCTC  2738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2665  ATCTTTGCCTCACTGCTGCTGGAGCGCCGGGTCATTTTTGTGGCAGATAAGCTCAGTACCCTCTCCAGCTGCTC  2738

Query 2739  CCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCCCGGCCTCCATGA  2812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2739  CCACGCGGTGGTGGCCTTGCTCTACCCCTTCTCCTGGCAGCACACCTTCATTCCTGTCCTCCCGGCCTCCATGA  2812

Query 2813  TTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCCCAAACTGAAGGAGCTG  2886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2813  TTGACATCGTCTGCTGTCCCACCCCCTTCCTGGTTGGCCTGCTCTCCAGCTCCCTCCCCAAACTGAAGGAGCTG  2886

Query 2887  CCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAGATGGACGACGAAGACACGTT  2960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2887  CCTGTGGAGGAGGCGCTGATGGTGAATCTGGGATCTGACCGATTCATCCGACAGATGGACGACGAAGACACGTT  2960

Query 2961  GTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGAATGAGCTGATCTCCCAGGACTCTG  3034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2961  GTTACCTAGGAAGTTACAGGCAGCTCTGGAGCAGGCTCTGGAGAGGAAGAATGAGCTGATCTCCCAGGACTCTG  3034

Query 3035  ACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTCGGAGGTGTTTATCCGGTTCTTTGTGGAG  3108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3035  ACAGCGACTCCGACGATGAATGTAATACCCTCAATGGGCTGGTGTCGGAGGTGTTTATCCGGTTCTTTGTGGAG  3108

Query 3109  ACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAGGGAGAGAGGGCCTTTCAGCGAGAGGCCTTCCG  3182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3109  ACCGTTGGGCACTACTCCCTCTTTCTGACACAGAGTGAGAAGGGAGAGAGGGCCTTTCAGCGAGAGGCCTTCCG  3182

Query 3183  CAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTGAGGTTTTTATGGAGTCTCAGATGTTTGCTGGCTTCA  3256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183  CAAATCTGTGGCCTCCAAAAGCATCCGCCGCTTTCTTGAGGTTTTTATGGAGTCTCAGATGTTTGCTGGCTTCA  3256

Query 3257  TCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAAGGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAAGAA  3330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257  TCCAAGACAGGGAGCTAAGAAAGTGTCGGGCAAAGGGCCTTTTTGAGCAGCGAGTGGAGCAGTACTTAGAAGAA  3330

Query 3331  CTCCCAGACACTGAGCAGAGTGGAATGAATAAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCACAA  3404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331  CTCCCAGACACTGAGCAGAGTGGAATGAATAAGTTTCTCCGAGGTTTGGGCAACAAAATGAAGTTTCTCCACAA  3404

Query 3405  GAAGAAT  3411
            |||||||
Sbjct 3405  GAAGAAT  3411

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