Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
NM_001351856.1
Aligned Length:
2634
Identities:
2624
Gaps:
6

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370

Query  371  AGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAGGA  444
            |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAGGA  444

Query  445  CACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCA  518

Query  519  GAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGC  592

Query  593  AGGAGGAGAAGCAGAGAAAAGCAGA------GGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAA  660
            |||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGGAGGAGAAGCAGAGAAAAGCAGAGGTAAGGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAA  666

Query  661  GAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGA  734
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGA  740

Query  735  ACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTG  808
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTG  814

Query  809  AGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAA  882
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAA  888

Query  883  GATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGT  956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGT  962

Query  957  CACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACG  1030
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACG  1036

Query 1031  CTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCA  1104
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  CTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCA  1110

Query 1105  CCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAG  1178
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  CCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAG  1184

Query 1179  TGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGG  1252
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGG  1258

Query 1253  CGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCT  1326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCT  1332

Query 1327  CCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAGACACAGAAAGTGGCTGGGATGA  1400
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1333  CCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAGACACAGAAAGTGGCTGGGACGA  1406

Query 1401  CACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAG  1474
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAG  1480

Query 1475  ATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTAC  1548
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  ATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTAC  1554

Query 1549  ACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGAC  1622
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  ACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGAC  1628

Query 1623  CAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCAT  1696
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  CAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCAT  1702

Query 1697  GGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTG  1770
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  GGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTG  1776

Query 1771  ACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGC  1844
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  ACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGC  1850

Query 1845  AGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTG  1918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  AGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTG  1924

Query 1919  ATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTA  1992
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  ATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTA  1998

Query 1993  ACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGT  2066
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  ACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGT  2072

Query 2067  GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAG  2140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  GCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAG  2146

Query 2141  AAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAAT  2214
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAAT  2220

Query 2215  CTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCT  2288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  CTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCT  2294

Query 2289  TCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGG  2362
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  TCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGG  2368

Query 2363  AGGCTGAACAGGAAAAGCGAGAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGG  2436
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  AGGCTGAACAGGAGAAGCGAGAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGG  2442

Query 2437  CCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTG  2510
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  CCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTG  2516

Query 2511  CCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTG  2584
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517  CCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTG  2590

Query 2585  ATGCCCCTGAACTGGATGGGCTGGACCAGGTGGGACAGATCAGC  2628
            ||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 2591  ATGCCCCTGAACTGGATGGGCTGGACCAGGTGGGACAGATTAGC  2634

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