Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
NR_147792.1
Aligned Length:
3604
Identities:
2605
Gaps:
995

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGGGGCTGACCAGGCCGGTCCCCCGGGAACAGGAACCCTGGTGGACGGGTCCCAGCAGGCTTCTTCGGTGCCC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGAGGGAGCGGGTGCCCAAGGGGGTGGTCCCTGTGGCAGGTCCCGGGGTGGGGGCGCGGCGCTCCGGGAAGAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTTCCGCAGGTCCCCGCCCCGTCACGTGGGCGCCGGCCCCGGCCGCTGCGGTCGGTCCGCTGGTTGGTCGGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTTGGTCCGGCAGTTGGTCGGTGGGCCAGTGGCCCGTCGCTCGCTTCTGGGCTCTCATGTTTGAAGGTGGGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGACACGGGAGCGGCCCGCACACCTGAGCCGCCCGGAGAGGAGCCTCGGCCCCGTACCCAGTAAGAAGAGGAGG  370

Query    1  -----------------------ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGAC  51
                                   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGCCAGGCAGGCAAAAGGAGTCATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGAC  444

Query   52  GGGATCATTGCAGGCACTAAAACAGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGC  125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GGGATCATTGCAGGCACTAAAACAGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGC  518

Query  126  CTCCTACATGAACCCCTTCCCGGTGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTC  199
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CTCCTACATGAACCCCTTCCCGGTGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTC  592

Query  200  CTCAGGAGAGAGCAGCCCTCCTGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAG  273
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CTCAGGAGAGAGCAGCCCTCCTGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAG  666

Query  274  AGCTTGTCCCAGGTAAACCACCACAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGG  347
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AGCTTGTCCCAGGTAAACCACCACAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGG  740

Query  348  GGATAAGGAGTCCCTCATATTGCAGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAG  421
            ||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  741  GGATAAGGAGTCCCTCATATTGCAGGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAG  814

Query  422  ACCTGGAAGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTA  495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ACCTGGAAGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTA  888

Query  496  AGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGG  569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGCCGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGG  962

Query  570  CATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACC  643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  CATGGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACC  1036

Query  644  TCAAAATCAAAGTGGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAA  717
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TCAAAATCAAAGTGGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAA  1110

Query  718  GTCGCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGAC  791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GTCGCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGAC  1184

Query  792  AGCAGCTCTCCACAGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTT  865
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AGCAGCTCTCCACAGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTT  1258

Query  866  TGCTGCTTGCCAATGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTA  939
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TGCTGCTTGCCAATGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTA  1332

Query  940  AAGGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGG  1013
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AAGGAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGG  1406

Query 1014  TTTCAGCAAGTGGAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCT  1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  TTTCAGCAAGTGGAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCT  1480

Query 1088  CTCCTACAGTGGGGCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGT  1161
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CTCCTACAGTGGGGCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGT  1554

Query 1162  CTAGAAGACTTGAGAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAA  1235
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  CTAGAAGACTTGAGAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAA  1628

Query 1236  GGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAG  1309
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  GGACAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAG  1702

Query 1310  AGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA--------  1375
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        
Sbjct 1703  AGGCTGCCAAATCTCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAATCGTGGC  1776

Query 1376  -------------------------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTC  1424
                                     ||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1777  CGGAGTGTCAGTGCCCCCGTATTAGGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTC  1850

Query 1425  ATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCA  1498
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  ATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCA  1924

Query 1499  TTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAG  1572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAG  1998

Query 1573  TTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAG  1646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1999  TTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAG  2072

Query 1647  TGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTC  1720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073  TGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTC  2146

Query 1721  AGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAA  1794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2147  AGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAA  2220

Query 1795  AAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACA  1868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221  AAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACA  2294

Query 1869  GGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACA  1942
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2295  GGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACA  2368

Query 1943  AAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTA  2016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2369  AAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTA  2442

Query 2017  AAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCC  2090
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2443  AAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCC  2516

Query 2091  CCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACA  2164
            |||||||||||||||||||||||||||||                   ||||||||||||||||||||||||||
Sbjct 2517  CCACTGCCTGCACCGGCGGCCAGCTGATG-------------------AGAAGTTGTACAGTGGTCCAACCACA  2571

Query 2165  GGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGA  2238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2572  GGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGA  2645

Query 2239  GGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGAC  2312
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2646  GGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGAC  2719

Query 2313  GCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGA  2386
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||
Sbjct 2720  GCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAGAAGCGAGAGA  2793

Query 2387  AAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACAC  2460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2794  AAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACAC  2867

Query 2461  TTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGT  2534
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2868  TTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGT  2941

Query 2535  CAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGG  2608
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2942  CAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGG  3015

Query 2609  ACCAGGTGGGACAGATCAGC------------------------------------------------------  2628
            ||||||||||||||||.|||                                                      
Sbjct 3016  ACCAGGTGGGACAGATTAGCTGATGCCCTTGTCACCTGCCCTCTGTGCACCCTGAGAGCTCACAGTAACACTGT  3089

Query 2629  --------------------------------------------------------------------------  2628
                                                                                      
Sbjct 3090  GTGTGTCACCATATAACTGCACCTCACCCCCGCACGTGTGCATGACTCGCAGAGAATATTCCAGCAATTGTGTA  3163

Query 2629  --------------------------------------------------------------------------  2628
                                                                                      
Sbjct 3164  CCCCTGGGCCAGTCTCTTTGAACCCTGAGGGTGGCCAGGATCTGGAGCTGCATCTCTAAGGGGCCAGGCTTTGG  3237

Query 2629  --------------------------------------------------------------------------  2628
                                                                                      
Sbjct 3238  GGACCATTGCCAAAGGTGGACTCAGGAGGAAAGACACTTAAAGACACTTTTACATGTCTAGTAATTCTTGATGT  3311

Query 2629  --------------------------------------------------------------------------  2628
                                                                                      
Sbjct 3312  TCATCTTCAGCACCAGTGGAAACACATGAACTTCGATGCAGGTCCAGAGACCATGGACACTCCCACGAGGCTCA  3385

Query 2629  --------------------------------------------------------------------------  2628
                                                                                      
Sbjct 3386  GCTCTCAGGCACCCCCTACACTTCAGTTGAGGGAAAAGCTCAAGTGCCTTAGGCCCGTGGACCACAGTCTTGGC  3459

Query 2629  --------------------------------------------------------------------------  2628
                                                                                      
Sbjct 3460  TGAGATCAAAGGGATGAGCAACAGGGACTTCTGCCACAGTGACAATGGAATTGTGTTGTGCCTTACTTCAGAGG  3533

Query 2629  ----------------------------------------------------  2628
                                                                
Sbjct 3534  TGGTCTCTTCTTTCTTGTAATAAAAGCAATATTTATGCGGAAAGCAAGCAGC  3585

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