Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
XM_006507446.2
Aligned Length:
2688
Identities:
2058
Gaps:
342

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTT-----GAAGAG---------------AGC  276
                                                  |||||.|     |.||||               |||
Sbjct    1  --------------------------------------ATGGTATCCGGAGCAGAGGGTATATTTGTCGCCAGC  36

Query  277  TTGTCCCAGGTAAACCACCACAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGA  350
            ..||||||||||||.||||||.||||||||||||||||||||||||||||||||.|||||||.||||||||.||
Sbjct   37  CCGTCCCAGGTAAATCACCACGGTGCTGCTAGTAATGAAACCTACCAGGAACGCCTGGCACGGCTAGAAGGAGA  110

Query  351  TAAGGAGTCCCTCATATTGCAGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACC  424
            |||.||||||||||||.|.||||||||.|||.|||||||.|||||.||||||||.|||||.||||||||.||||
Sbjct  111  TAAAGAGTCCCTCATACTACAGGTGAGCGTCCTCACAGATCAAGTGGAAGCCCAAGGAGAGAAGATTCGGGACC  184

Query  425  TGGAAGTGTGTCTGGAAGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGC  498
            |.|||||||||||||||||.|||||||||||.|||||||||||.||||||||||||||.||||||||||||||.
Sbjct  185  TTGAAGTGTGTCTGGAAGGCCACCAGGTGAAGCTCAATGCTGCAGAAGAGATGCTTCAGCAGGAGCTGCTAAGT  258

Query  499  CGCACATCTCTTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCAT  572
            |||||||||||.||||||||||||.|.||||||||||||||.|||||||||||||||||||||||||||||.||
Sbjct  259  CGCACATCTCTGGAGACCCAGAAGTTGGATCTGATGACTGAGGTGTCTGAGCTGAAGCTCAAGCTGGTTGGTAT  332

Query  573  GGAGAAGGAGCAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCA  646
            |||.||.||.||||.|||.||.||.||.||.||||||||||||||||||||||||||||||||.|.||||||||
Sbjct  333  GGAAAAAGAACAGAAAGAACAAGAAGAAAAACAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTTAAGCACCTCA  406

Query  647  AAATCAAAGTGGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTC  720
            |||||||.|||||.|||.||||.||.||..||||.||||||||.|||.||||.||||||||.||||||||.||.
Sbjct  407  AAATCAAGGTGGAGGAGCTGGAGAACGAGCGGAACCAGTATGAGTGGGAGCTGAAGGCCACCAAGGCTGAGGTA  480

Query  721  GCCCAGCTGCAAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGC  794
            ||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||||||||||..||
Sbjct  481  GCCCAGCTGCAAGAACAGGTGGCCCTAAAAGATGCAGAAATTGAGCGTCTCCACAGCCAGCTCTCCCGGAGTGC  554

Query  795  AGCTCTCCACAGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGC  868
            ||||||||||||.||   .||..|||||.||||.||||||||.||.|||||||||||||||||||||||..|||
Sbjct  555  AGCTCTCCACAGCGA---CCATGCAGAGCGAGATCAAGAAATCCACCGTCTGAAAATGGGGATGGAAACACTGC  625

Query  869  TGCTTGCCAATGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAG  942
            ||.||||||||||.||||||||||||||||||||||||||.||.||||||||.|||.||||||..|.|||||||
Sbjct  626  TGGTTGCCAATGAGGATAAGGACCGTCGGATAGAGGAGCTGACAGGGCTGTTGAACAAGTACCTAAGGGTAAAG  699

Query  943  GAGATTGTGATGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTT  1016
            |||||||||||||..|||||.||||||||.||.|||||.|||||.|||||||||||.|||...||||||.|.||
Sbjct  700  GAGATTGTGATGGCAACTCAGGGGCCTTCAGAAAGAACCCTCTCCATCAATGAAGATGAAATAGAGGGAAGCTT  773

Query 1017  CAGCAAGTGGAACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTC  1090
            |.|.||.|||||..|.||||||||...|||.||.|||.|....||.||||||||..|.|||.||||.|||||||
Sbjct  774  CCGAAAATGGAATACCACAAATAAAAGCCCAGAGGAAGTCCCGAAGCAAGAGATATCACCACGATGCAGCTCTC  847

Query 1091  CTACAGTGGGGCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTA  1164
            |.||....||.||||||||.||||||||||||||||||||.|.||||||||||||.||.|||||.||.||||||
Sbjct  848  CCACCCCAGGACCACCTCCTTTGCCACAGAAATCACTGGAGAGCAGGGCTCAGAAGAAACTCTCCTGCAGTCTA  921

Query 1165  GAAGACTTGAGAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGA  1238
            ||||||||||||.|||||||||.||||||||||.|.|||||||||||||..|.|||.|||..|||.||||||||
Sbjct  922  GAAGACTTGAGACGTGAATCTGGGGATAAGTGTGTCGATGGGAACCAGCTGTCCCCAGTGGGAGAGCCCAAGGA  995

Query 1239  CAGCCCTTTCTTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGG  1312
            ||||.|||||.|.||||||||.|||||.|||||.||||||||||||||||||||||||||.|||||||||||.|
Sbjct  996  CAGCTCTTTCCTAGCGGAGCAGAAATACCCCACATTACCTGGGAAGCTTTCAGGAGCCACACCCAATGGAGAAG  1069

Query 1313  CTGCCAAATCTCCTCCCACCATCTG-------CCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA----  1375
            ||||||||||||||||||    |||       ||||||||||.|..|.||||||||||.||..|.|||||    
Sbjct 1070  CTGCCAAATCTCCTCCCA----CTGCCTCCCTCCAGCCTGACTCTTCAGGGAGCAGCCAGCCAAAGCTGAATCG  1139

Query 1376  -----------------------------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACC  1420
                                         |||||||||||.|.||||||||.||.|..|               
Sbjct 1140  CGGCTGGAGTGTCAGTGCTCCCGTATTAGGAGACACAGAAGGAGGCTGGGAAGATATAG---------------  1198

Query 1421  TCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAA  1494
            |||||||..|.||.||.||.|||||.|||.|.|||||||||||..|||||||||||||.|||||||..||||||
Sbjct 1199  TCTCATCTGCTTCGTCTGGGACTGAGTCAAGCCCTCAGTCTCCCGTGACACCAGATGGCAAACGGAGCCCCAAA  1272

Query 1495  GGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGC  1568
            |||||||||||||||||||||||.|||||||||||||||||.|||||.|||.|.|||||..|.|.|||||||||
Sbjct 1273  GGCATTAAGAAGTTCTGGGGAAAGATCCGAAGAACTCAGTCTGGAAACTTCAATACTGATGCACCGGGGATGGC  1346

Query 1569  AGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGA  1642
            ||||||||||||||||||||||||.|||||.||.||.|||||.||.|||||||||||||||.||||||||||||
Sbjct 1347  AGAGTTTCGACGAGGTGGGCTCCGAGCAACTGCGGGACCAAGGCTTTCTAGGACCAGGGACACCAAGGGACAGA  1420

Query 1643  AAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTG  1716
            ||.||||.||||||||||||||||||||||||||||||||.||.||.|||.|||||.|||||||.||.||||||
Sbjct 1421  AATGTGATGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAACGCGTATGTACATGGATGGAGGATTTCGGCCTG  1494

Query 1717  GCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACAT  1790
            |.|||||||||||||||||||||.||||||||..|.|||||.||.||..||.|||||||.||||||||||||||
Sbjct 1495  GGTCAGTATGTGATCTTTGCCAGACAGTGGGTGACATCTGGACATACACTACTGACAGCTACCCCTCAGGACAT  1568

Query 1791  GGAAAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCA  1864
            |||||||||||||||.|||||.|||||.|||||||||||||||||.|||||||||||||||||.||||||.|||
Sbjct 1569  GGAAAAGGAGCTAGGGATTAAACACCCCCTCCACAGGAAGAAGCTGGTTTTAGCAGTGAAAGCTATCAACGCCA  1642

Query 1865  AACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAG  1938
            |.||.||.||.|.||||||.|||||.||||||||||||||||||.||||||||||||||||||||||||||||.
Sbjct 1643  AGCAAGAAGAAACGTCTGCGCTGCTGGACCACATTTGGGTGACACGGTGGCTTGATGATATTGGCTTACCCCAA  1716

Query 1939  TACAAAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTT  2012
            |||||||||||||||||||||||.||||||||.||.||||||||||||||||||||||||||.|||.|||||||
Sbjct 1717  TACAAAGACCAGTTTCATGAATCAAGAGTTGATGGGCGAATGCTGCAATACCTAACTGTGAATGATCTACTCTT  1790

Query 2013  CTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCA  2086
            |||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.||||||||||||||||
Sbjct 1791  CTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCTATTCACGTGCTACATGTCAACAAGTTCA  1864

Query 2087  ACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAAC  2160
            |||||.|||||||||||.||.||||.||||||||||||||||||||.|||||.||||||||.||||||||||||
Sbjct 1865  ACCCCAACTGCCTGCACAGGAGGCCTGCTGATGAGAGTAACCTTTCCCCTTCCGAAGTTGTGCAGTGGTCCAAC  1938

Query 2161  CACAGGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCA  2234
            ||||||||.|||||||||.|.|||||.||||||||||||||||||||||||||.||||||||||||||.|||||
Sbjct 1939  CACAGGGTAATGGAGTGGCTGCGATCCGTGGACCTGGCAGAGTATGCACCCAACCTTCGAGGGAGTGGCGTCCA  2012

Query 2235  TGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAA  2308
            |||.||||||||||||||||||||.|||||.||||||||||||||||||||||||||.||||||||||||||.|
Sbjct 2013  TGGCGGCCTCATTATCCTGGAGCCTCGCTTTACTGGGGACACCCTGGCTATGCTTCTTAACATCCCCCCACAGA  2086

Query 2309  AGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGA  2382
            |||||||||||||||||||.|||||||||||||||||.|||.||||||||||.|||||||||||||||||||||
Sbjct 2087  AGACGCTCCTCAGGCGCCATCTGACCACCAAGTTCAACGCCCTGATTGGTCCTGAGGCTGAACAGGAAAAGCGA  2160

Query 2383  GAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTC  2456
            ||.||||||||||||||.||.||||||||.|||||||||||.||||||||.|||||.||||||||.||||||||
Sbjct 2161  GACAAAATGGCCTCACCCGCCTACACACCTCTGACCACCACCGCCAAAGTTCGGCCTAGGAAACTTGGATTTTC  2234

Query 2457  ACACTTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACG  2530
            |||.||.||||||||.||||||||||||||.||||||||.||.||.|||||||||||.||||||||..|.||.|
Sbjct 2235  ACATTTTGGAAACATGAGAAAAAAGAAGTTTGATGAATCTACAGATTACATTTGCCCCATGGAGCCTGGAGATG  2308

Query 2531  GTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGG  2604
            .|||||||||.||.||||||||||||.|.|.|||||||||||||||.||||||||...||.||||||.|||||.
Sbjct 2309  CTGTCAGTGACAGCCACAGGGTCTACGGAGTCTACCGGGGCCTCAGTCCCCTTGACAACCATGAACTAGATGGT  2382

Query 2605  CTGGACCAGGTGGGACAGATCAGC  2628
            .|||||||||||||||||||.|||
Sbjct 2383  TTGGACCAGGTGGGACAGATAAGC  2406

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