Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
XM_006507454.1
Aligned Length:
2668
Identities:
1867
Gaps:
536

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAGGA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCA  518
                                          ||||||||.||||||||||||||.|||||||||||.||||||||
Sbjct    1  ------------------------------ATGCTTCAGCAGGAGCTGCTAAGTCGCACATCTCTGGAGACCCA  44

Query  519  GAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGC  592
            ||||.|.||||||||||||||.|||||||||||||||||||||||||||||.|||||.||.||.||||.|||.|
Sbjct   45  GAAGTTGGATCTGATGACTGAGGTGTCTGAGCTGAAGCTCAAGCTGGTTGGTATGGAAAAAGAACAGAAAGAAC  118

Query  593  AGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTG  666
            |.||.||.||.||||||||||||||||||||||||||||||||.|.|||||||||||||||.|||||.|||.||
Sbjct  119  AAGAAGAAAAACAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTTAAGCACCTCAAAATCAAGGTGGAGGAGCTG  192

Query  667  GAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT  740
            ||.||.||..||||.||||||||.|||.||||.||||||||.||||||||.||.||||||||||||||||||||
Sbjct  193  GAGAACGAGCGGAACCAGTATGAGTGGGAGCTGAAGGCCACCAAGGCTGAGGTAGCCCAGCTGCAAGAACAGGT  266

Query  741  GGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAGAGTC  814
            ||||||.|||||||||||||||||||||||.|||||||||||||||||||..||||||||||||||.||   .|
Sbjct  267  GGCCCTAAAAGATGCAGAAATTGAGCGTCTCCACAGCCAGCTCTCCCGGAGTGCAGCTCTCCACAGCGA---CC  337

Query  815  ACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGATAAG  888
            |..|||||.||||.||||||||.||.|||||||||||||||||||||||..|||||.||||||||||.||||||
Sbjct  338  ATGCAGAGCGAGATCAAGAAATCCACCGTCTGAAAATGGGGATGGAAACACTGCTGGTTGCCAATGAGGATAAG  411

Query  889  GACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCACTCA  962
            ||||||||||||||||||||.||.||||||||.|||.||||||..|.||||||||||||||||||||..|||||
Sbjct  412  GACCGTCGGATAGAGGAGCTGACAGGGCTGTTGAACAAGTACCTAAGGGTAAAGGAGATTGTGATGGCAACTCA  485

Query  963  AGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAA  1036
            .||||||||.||.|||||.|||||.|||||||||||.|||...||||||.|.|||.|.||.|||||..|.||||
Sbjct  486  GGGGCCTTCAGAAAGAACCCTCTCCATCAATGAAGATGAAATAGAGGGAAGCTTCCGAAAATGGAATACCACAA  559

Query 1037  ATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTCCA  1110
            ||||...|||.||.|||.|....||.||||||||..|.|||.||||.||||||||.||....||.||||||||.
Sbjct  560  ATAAAAGCCCAGAGGAAGTCCCGAAGCAAGAGATATCACCACGATGCAGCTCTCCCACCCCAGGACCACCTCCT  633

Query 1111  TTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTGAATC  1184
            ||||||||||||||||||||.|.||||||||||||.||.|||||.||.||||||||||||||||||.|||||||
Sbjct  634  TTGCCACAGAAATCACTGGAGAGCAGGGCTCAGAAGAAACTCTCCTGCAGTCTAGAAGACTTGAGACGTGAATC  707

Query 1185  TGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGC  1258
            ||.||||||||||.|.|||||||||||||..|.|||.|||..|||.||||||||||||.|||||.|.|||||||
Sbjct  708  TGGGGATAAGTGTGTCGATGGGAACCAGCTGTCCCCAGTGGGAGAGCCCAAGGACAGCTCTTTCCTAGCGGAGC  781

Query 1259  ACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACC  1332
            |.|||||.|||||.||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||  
Sbjct  782  AGAAATACCCCACATTACCTGGGAAGCTTTCAGGAGCCACACCCAATGGAGAAGCTGCCAAATCTCCTCCCA--  853

Query 1333  ATCTG-------CCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA------------------------  1375
              |||       ||||||||||.|..|.||||||||||.||..|.|||||                        
Sbjct  854  --CTGCCTCCCTCCAGCCTGACTCTTCAGGGAGCAGCCAGCCAAAGCTGAATCGCGGCTGGAGTGTCAGTGCTC  925

Query 1376  ---------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGC  1440
                     |||||||||||.|.||||||||.||.|..|               |||||||..|.||.||.||.
Sbjct  926  CCGTATTAGGAGACACAGAAGGAGGCTGGGAAGATATAG---------------TCTCATCTGCTTCGTCTGGG  984

Query 1441  ACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGG  1514
            |||||.|||.|.|||||||||||..|||||||||||||.|||||||..||||||||||||||||||||||||||
Sbjct  985  ACTGAGTCAAGCCCTCAGTCTCCCGTGACACCAGATGGCAAACGGAGCCCCAAAGGCATTAAGAAGTTCTGGGG  1058

Query 1515  AAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGC  1588
            |||.|||||||||||||||||.|||||.|||.|.|||||..|.|.|||||||||||||||||||||||||||||
Sbjct 1059  AAAGATCCGAAGAACTCAGTCTGGAAACTTCAATACTGATGCACCGGGGATGGCAGAGTTTCGACGAGGTGGGC  1132

Query 1589  TCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCC  1662
            ||||.|||||.||.||.|||||.||.|||||||||||||||.||||||||||||||.||||.||||||||||||
Sbjct 1133  TCCGAGCAACTGCGGGACCAAGGCTTTCTAGGACCAGGGACACCAAGGGACAGAAATGTGATGCCAATGCCCCC  1206

Query 1663  TTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGC  1736
            ||||||||||||||||||||.||.||.|||.|||||.|||||||.||.|||||||.||||||||||||||||||
Sbjct 1207  TTTGCCCAGTGGAGCACAGAACGCGTATGTACATGGATGGAGGATTTCGGCCTGGGTCAGTATGTGATCTTTGC  1280

Query 1737  CAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTA  1810
            |||.||||||||..|.|||||.||.||..||.|||||||.|||||||||||||||||||||||||||||.||||
Sbjct 1281  CAGACAGTGGGTGACATCTGGACATACACTACTGACAGCTACCCCTCAGGACATGGAAAAGGAGCTAGGGATTA  1354

Query 1811  AGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCA  1884
            |.|||||.|||||||||||||||||.|||||||||||||||||.||||||.||||.||.||.||.|.||||||.
Sbjct 1355  AACACCCCCTCCACAGGAAGAAGCTGGTTTTAGCAGTGAAAGCTATCAACGCCAAGCAAGAAGAAACGTCTGCG  1428

Query 1885  CTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGA  1958
            |||||.||||||||||||||||||.||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 1429  CTGCTGGACCACATTTGGGTGACACGGTGGCTTGATGATATTGGCTTACCCCAATACAAAGACCAGTTTCATGA  1502

Query 1959  ATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAAC  2032
            |||.||||||||.||.||||||||||||||||||||||||||.|||.|||||||||||||||||||||||||||
Sbjct 1503  ATCAAGAGTTGATGGGCGAATGCTGCAATACCTAACTGTGAATGATCTACTCTTCTTAAAAGTCACCAGCCAAC  1576

Query 2033  TACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGG  2106
            |||||||||||||||||||||||||.|||||||||||.|||||||||||||||||||||.|||||||||||.||
Sbjct 1577  TACATCATCTCAGCATCAAATGTGCTATTCACGTGCTACATGTCAACAAGTTCAACCCCAACTGCCTGCACAGG  1650

Query 2107  CGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTT  2180
            .||||.||||||||||||||||||||.|||||.||||||||.||||||||||||||||||||.|||||||||.|
Sbjct 1651  AGGCCTGCTGATGAGAGTAACCTTTCCCCTTCCGAAGTTGTGCAGTGGTCCAACCACAGGGTAATGGAGTGGCT  1724

Query 2181  ACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGG  2254
            .|||||.||||||||||||||||||||||||||.||||||||||||||.||||||||.||||||||||||||||
Sbjct 1725  GCGATCCGTGGACCTGGCAGAGTATGCACCCAACCTTCGAGGGAGTGGCGTCCATGGCGGCCTCATTATCCTGG  1798

Query 2255  AGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCAC  2328
            ||||.|||||.||||||||||||||||||||||||||.||||||||||||||.||||||||||||||||||||.
Sbjct 1799  AGCCTCGCTTTACTGGGGACACCCTGGCTATGCTTCTTAACATCCCCCCACAGAAGACGCTCCTCAGGCGCCAT  1872

Query 2329  CTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGAAAATGGCCTCACCAGC  2402
            |||||||||||||||||.|||.||||||||||.|||||||||||||||||||||||.||||||||||||||.||
Sbjct 1873  CTGACCACCAAGTTCAACGCCCTGATTGGTCCTGAGGCTGAACAGGAAAAGCGAGACAAAATGGCCTCACCCGC  1946

Query 2403  TTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAA  2476
            .||||||||.|||||||||||.||||||||.|||||.||||||||.|||||||||||.||.||||||||.||||
Sbjct 1947  CTACACACCTCTGACCACCACCGCCAAAGTTCGGCCTAGGAAACTTGGATTTTCACATTTTGGAAACATGAGAA  2020

Query 2477  AAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGG  2550
            ||||||||||.||||||||.||.||.|||||||||||.||||||||..|.||.|.|||||||||.||.||||||
Sbjct 2021  AAAAGAAGTTTGATGAATCTACAGATTACATTTGCCCCATGGAGCCTGGAGATGCTGTCAGTGACAGCCACAGG  2094

Query 2551  GTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGGTGGGACAGAT  2624
            ||||||.|.|.|||||||||||||||.||||||||...||.||||||.|||||..|||||||||||||||||||
Sbjct 2095  GTCTACGGAGTCTACCGGGGCCTCAGTCCCCTTGACAACCATGAACTAGATGGTTTGGACCAGGTGGGACAGAT  2168

Query 2625  CAGC  2628
            .|||
Sbjct 2169  AAGC  2172

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