Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
XM_006718353.2
Aligned Length:
2792
Identities:
2170
Gaps:
604

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGG--AAGTGTGTCTGGAAG  442
                                                                 .|||  ||||       .||.
Sbjct    1  -----------------------------------------------------ATGGGAAAGT-------TAAT  14

Query  443  GACACCAG---GTGAAACTCAATGCTGCTGAAGAGA-----TGCTTCAACAGGAGCTGCTAAGCCGCACATCTC  508
            .|||  ||   |||.||      |||..|||.||||     |||..|.| |.||||||||||||||||||||||
Sbjct   15  AACA--AGGATGTGGAA------GCTATTGAGGAGACGGAGTGCGCCTA-AAGAGCTGCTAAGCCGCACATCTC  79

Query  509  TTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAG  582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   80  TTGAGACCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAG  153

Query  583  CAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGT  656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  154  CAGAGAGAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGT  227

Query  657  GGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGC  730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  228  GGAAGAGTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGC  301

Query  731  AAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCAC  804
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  302  AAGAACAGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCAC  375

Query  805  AGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAA  878
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  376  AGTGAGAGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAA  449

Query  879  TGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGA  952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  450  TGAAGATAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGA  523

Query  953  TGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGG  1026
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  524  TGGTCACTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGG  597

Query 1027  AACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGG  1100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  598  AACGCTACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGG  671

Query 1101  GCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGA  1174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  672  GCCACCTCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGA  745

Query 1175  GAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTC  1248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  746  GAAGTGAATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTC  819

Query 1249  TTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATC  1322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  820  TTGGCGGAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATC  893

Query 1323  TCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA---------------------  1375
            |||||||||||||||||||||||||||||||||||||||||||||||||||||                     
Sbjct  894  TCCTCCCACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAATCGTGGCCGGAGTGTCAGTG  967

Query 1376  ------------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCG  1437
                        ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||
Sbjct  968  CCCCCGTATTAGGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCG  1041

Query 1438  GGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTG  1511
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042  GGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTG  1115

Query 1512  GGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTG  1585
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1116  GGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTG  1189

Query 1586  GGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCC  1659
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190  GGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCC  1263

Query 1660  CCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTT  1733
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1264  CCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTT  1337

Query 1734  TGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAA  1807
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1338  TGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAA  1411

Query 1808  TTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCT  1881
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412  TTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCT  1485

Query 1882  GCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCA  1955
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1486  GCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCA  1559

Query 1956  TGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCC  2029
            ||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1560  TGAATCTAGAGTTGACAGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCC  1633

Query 2030  AACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCAC  2103
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1634  AACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCAC  1707

Query 2104  CGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTG  2177
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1708  CGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTG  1781

Query 2178  GTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCC  2251
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1782  GTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCC  1855

Query 2252  TGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGC  2325
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856  TGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGC  1929

Query 2326  CACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGAAAATGGCCTCACC  2399
            ||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1930  CACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAGAAGCGAGAGAAAATGGCCTCACC  2003

Query 2400  AGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAA  2473
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2004  AGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAA  2077

Query 2474  GAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCAC  2547
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2078  GAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCAC  2151

Query 2548  AGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGGTGGGA--  2619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|  
Sbjct 2152  AGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGATGGCACC  2225

Query 2620  -------------------CAGATCAGC----------------------------------------------  2628
                               ||||| ||.                                              
Sbjct 2226  TTCGGAAGGTACCGTGACGCAGAT-AGGGCTCCTCTCCCAAGACATTCACCGCCTTACGACAATGCTGAGCCAG  2298

Query 2629  ------------------------------------------------------  2628
                                                                  
Sbjct 2299  GACCAGCTGCTGAATGACTCTCGCCTGCCTGCCCCCAACTCTGATGACTGGAGA  2352

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