Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
XM_011520417.2
Aligned Length:
2784
Identities:
2396
Gaps:
366

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTG--TGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCC  146
                             |||     ||  |||||                        |||             
Sbjct    1  -----------------ATG-----TGGCTGAGC------------------------ACA-------------  15

Query  147  GGTGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCC  220
             |||         ||.|..||| .|||||.|||     |||.||||| |.|..|.|||||.||.|.||.||.| 
Sbjct   16  -GTG---------ATGGCAGAC-AGAGGCGGGC-----AGAGGCTGG-GATCACGCAGGACAGTGAAGGCCAC-  71

Query  221  TGAGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCAC  294
                                                                      ||||||||||||||||
Sbjct   72  ----------------------------------------------------------GTCCCAGGTAAACCAC  87

Query  295  CACAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATT  368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   88  CACAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATT  161

Query  369  GCAGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAG  442
            |||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  162  GCAGGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAG  235

Query  443  GACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACC  516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  236  GACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACC  309

Query  517  CAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGA  590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  310  CAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGA  383

Query  591  GCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGAGT  664
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  384  GCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGAGT  457

Query  665  TGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAG  738
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  458  TGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAG  531

Query  739  GTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAGAG  812
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  532  GTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAGAG  605

Query  813  TCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGATA  886
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  606  TCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGATA  679

Query  887  AGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCACT  960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  680  AGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCACT  753

Query  961  CAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTAC  1034
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  754  CAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTAC  827

Query 1035  AAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTC  1108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  828  AAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTC  901

Query 1109  CATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTGAA  1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  902  CATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTGAA  975

Query 1183  TCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGA  1256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  976  TCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGA  1049

Query 1257  GCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCA  1330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1050  GCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCA  1123

Query 1331  CCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA-----------------------------  1375
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct 1124  CCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAATCGTGGCCGGAGTGTCAGTGCCCCCGTA  1197

Query 1376  ----GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGA  1445
                ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198  TTAGGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGA  1271

Query 1446  ATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAA  1519
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1272  ATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAA  1345

Query 1520  TCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGG  1593
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1346  TCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGG  1419

Query 1594  GCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGC  1667
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1420  GCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGC  1493

Query 1668  CCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGC  1741
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494  CCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGC  1567

Query 1742  AGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCAC  1815
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1568  AGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCAC  1641

Query 1816  CCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCT  1889
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1642  CCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCT  1715

Query 1890  AGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTA  1963
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1716  AGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTA  1789

Query 1964  GAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACAT  2037
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1790  GAGTTGACAGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACAT  1863

Query 2038  CATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCC  2111
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1864  CATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCC  1937

Query 2112  AGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGAT  2185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1938  AGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGAT  2011

Query 2186  CTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCA  2259
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2012  CTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCA  2085

Query 2260  CGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGAC  2333
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2086  CGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGAC  2159

Query 2334  CACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGAAAATGGCCTCACCAGCTTACA  2407
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 2160  CACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAGAAGCGAGAGAAAATGGCCTCACCAGCTTACA  2233

Query 2408  CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAG  2481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2234  CACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAG  2307

Query 2482  AAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTA  2555
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2308  AAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTA  2381

Query 2556  CAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGGTGGGA----------  2619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|          
Sbjct 2382  CAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGATGGCACCTTCGGAAG  2455

Query 2620  -----------CAGATCAGC------------------------------------------------------  2628
                       ||||| ||.                                                      
Sbjct 2456  GTACCGTGACGCAGAT-AGGGCTCCTCTCCCAAGACATTCACCGCCTTACGACAATGCTGAGCCAGGACCAGCT  2528

Query 2629  ----------------------------------------------  2628
                                                          
Sbjct 2529  GCTGAATGACTCTCGCCTGCCTGCCCCCAACTCTGATGACTGGAGA  2574

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