Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
XM_011520418.2
Aligned Length:
2786
Identities:
2270
Gaps:
499

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTC----TAGAAGGGGATAAGGAGTCCCTCATA  366
                                                   |.|||    .||.||.||...| ||.|||||..||
Sbjct    1  ---------------------------------------ATGTCATCAGAGCAGTGGCCGA-GACTCCCTGGTA  34

Query  367  TTGCAGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGA  440
                |||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   35  ----AGGTGAGTGTCCTCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGA  104

Query  441  AGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGA  514
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  105  AGGACACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGA  178

Query  515  CCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGA  588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  179  CCCAGAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGA  252

Query  589  GAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGA  662
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  253  GAGCAGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGA  326

Query  663  GTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAAC  736
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  327  GTTGGAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAAC  400

Query  737  AGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAG  810
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  401  AGGTGGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAG  474

Query  811  AGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGA  884
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  475  AGTCACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGA  548

Query  885  TAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCA  958
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  549  TAAGGACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCA  622

Query  959  CTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCT  1032
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  623  CTCAAGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCT  696

Query 1033  ACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACC  1106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  697  ACAAATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACC  770

Query 1107  TCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTG  1180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  771  TCCATTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTG  844

Query 1181  AATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCG  1254
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  845  AATCTGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCG  918

Query 1255  GAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCC  1328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  919  GAGCACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCC  992

Query 1329  CACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGA---------------------------  1375
            |||||||||||||||||||||||||||||||||||||||||||||||                           
Sbjct  993  CACCATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAATCGTGGCCGGAGTGTCAGTGCCCCCG  1066

Query 1376  ------GAGACACAGAAAGTGGCTGGGATGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACT  1443
                  ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1067  TATTAGGAGACACAGAAAGTGGCTGGGACGACACTGCTGTGGTCAATGACCTCTCATCCACATCATCGGGCACT  1140

Query 1444  GAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAA  1517
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141  GAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTAAACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAA  1214

Query 1518  AATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCC  1591
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1215  AATCCGAAGAACTCAGTCAGGAAATTTCTACACTGACACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCC  1288

Query 1592  GGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTT  1665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1289  GGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGACTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTT  1362

Query 1666  GCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAG  1739
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1363  GCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGGAGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAG  1436

Query 1740  GCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGC  1813
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437  GCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCCACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGC  1510

Query 1814  ACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTG  1887
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1511  ACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAAAGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTG  1584

Query 1888  CTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATC  1961
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1585  CTAGACCACATTTGGGTGACAAGGTGGCTTGATGATATTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATC  1658

Query 1962  TAGAGTTGACGGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAACTAC  2035
            ||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1659  TAGAGTTGACAGACGAATGCTGCAATACCTAACTGTGAACGATTTACTCTTCTTAAAAGTCACCAGCCAACTAC  1732

Query 2036  ATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGG  2109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1733  ATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCATGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGG  1806

Query 2110  CCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACG  2183
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1807  CCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTGTACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACG  1880

Query 2184  ATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGC  2257
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1881  ATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGAGGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGC  1954

Query 2258  CACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTG  2331
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1955  CACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAACATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTG  2028

Query 2332  ACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAAAAGCGAGAGAAAATGGCCTCACCAGCTTA  2405
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||
Sbjct 2029  ACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTGAACAGGAGAAGCGAGAGAAAATGGCCTCACCAGCTTA  2102

Query 2406  CACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAAAAA  2479
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2103  CACACCACTGACCACCACAGCCAAAGTCCGGCCAAGGAAACTAGGATTTTCACACTTCGGAAACATAAGAAAAA  2176

Query 2480  AGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTC  2553
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2177  AGAAGTTCGATGAATCGACGGACTACATTTGCCCAATGGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTC  2250

Query 2554  TACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGGTGGGA--------  2619
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|        
Sbjct 2251  TACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCCCTGAACTGGATGGGCTGGACCAGATGGCACCTTCGGA  2324

Query 2620  -------------CAGATCAGC----------------------------------------------------  2628
                         ||||| ||.                                                    
Sbjct 2325  AGGTACCGTGACGCAGAT-AGGGCTCCTCTCCCAAGACATTCACCGCCTTACGACAATGCTGAGCCAGGACCAG  2397

Query 2629  ------------------------------------------------  2628
                                                            
Sbjct 2398  CTGCTGAATGACTCTCGCCTGCCTGCCCCCAACTCTGATGACTGGAGA  2445

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