Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07245
Subject:
XM_024448725.1
Aligned Length:
2628
Identities:
2150
Gaps:
474

Alignment

Query    1  ATGGCTTCTGATGCTAGTCATGCGCTGGAAGCTGCCCTGGAGCAAATGGACGGGATCATTGCAGGCACTAAAAC  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  AGGTGCAGATCTTAGTGATGGTACTTGTGAGCCTGGACTGGCTTCCCCGGCCTCCTACATGAACCCCTTCCCGG  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  TGCTCCATCTCATCGAGGACTTGAGGCTGGCCTTGGAGATGCTGGAGCTTCCTCAGGAGAGAGCAGCCCTCCTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  AGCCAGATCCCTGGCCCAACAGCTGCCTACATAAAGGAATGGTTTGAAGAGAGCTTGTCCCAGGTAAACCACCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CAGTGCTGCTAGTAATGAAACCTACCAGGAACGCTTGGCACGTCTAGAAGGGGATAAGGAGTCCCTCATATTGC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGGTGAGTGTCATCACAGACCAAGTAGAAGCCCAGGGAGAAAAGATTCGAGACCTGGAAGTGTGTCTGGAAGGA  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  CACCAGGTGAAACTCAATGCTGCTGAAGAGATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCA  518
                                          ||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ------------------------------ATGCTTCAACAGGAGCTGCTAAGCCGCACATCTCTTGAGACCCA  44

Query  519  GAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGC  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   45  GAAGCTCGATCTGATGACTGAAGTGTCTGAGCTGAAGCTCAAGCTGGTTGGCATGGAGAAGGAGCAGAGAGAGC  118

Query  593  AGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  119  AGGAGGAGAAGCAGAGAAAAGCAGAGGAGTTACTGCAAGAGCTCAGGCACCTCAAAATCAAAGTGGAAGAGTTG  192

Query  667  GAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  193  GAAAATGAAAGGAATCAGTATGAATGGAAGCTAAAGGCCACTAAGGCTGAAGTCGCCCAGCTGCAAGAACAGGT  266

Query  741  GGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAGAGTC  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  267  GGCCCTGAAAGATGCAGAAATTGAGCGTCTGCACAGCCAGCTCTCCCGGACAGCAGCTCTCCACAGTGAGAGTC  340

Query  815  ACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGATAAG  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  341  ACACAGAGAGAGACCAAGAAATTCAACGTCTGAAAATGGGGATGGAAACTTTGCTGCTTGCCAATGAAGATAAG  414

Query  889  GACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCACTCA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  415  GACCGTCGGATAGAGGAGCTTACGGGGCTGTTAAACCAGTACCGGAAGGTAAAGGAGATTGTGATGGTCACTCA  488

Query  963  AGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAA  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  489  AGGGCCTTCGGAGAGAACTCTCTCAATCAATGAAGAAGAACCGGAGGGAGGTTTCAGCAAGTGGAACGCTACAA  562

Query 1037  ATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTCCA  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  563  ATAAGGACCCTGAAGAATTATTTAAACAAGAGATGCCTCCAAGATGTAGCTCTCCTACAGTGGGGCCACCTCCA  636

Query 1111  TTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTGAATC  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  637  TTGCCACAGAAATCACTGGAAACCAGGGCTCAGAAAAAGCTCTCTTGTAGTCTAGAAGACTTGAGAAGTGAATC  710

Query 1185  TGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  711  TGTGGATAAGTGTATGGATGGGAACCAGCCCTTCCCGGTGTTAGAACCCAAGGACAGCCCTTTCTTGGCGGAGC  784

Query 1259  ACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACC  1332
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  785  ACAAATATCCCACTTTACCTGGGAAGCTTTCAGGAGCCACGCCCAATGGAGAGGCTGCCAAATCTCCTCCCACC  858

Query 1333  ATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAGACACAGAAAGTGGCTGGGATGACACTGC  1406
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||
Sbjct  859  ATCTGCCAGCCTGACGCCACGGGGAGCAGCCTGCTGAGGCTGAGAGACACAGAAAGTGGCTGGGACGACACTGC  932

Query 1407  TGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTA  1480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  933  TGTGGTCAATGACCTCTCATCCACATCATCGGGCACTGAATCAGGTCCTCAGTCTCCTCTGACACCAGATGGTA  1006

Query 1481  AACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGAC  1554
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1007  AACGGAATCCCAAAGGCATTAAGAAGTTCTGGGGAAAAATCCGAAGAACTCAGTCAGGAAATTTCTACACTGAC  1080

Query 1555  ACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGA  1628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081  ACGCTGGGGATGGCAGAGTTTCGACGAGGTGGGCTCCGGGCAACCGCAGGGCCAAGACTCTCTAGGACCAGGGA  1154

Query 1629  CTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGG  1702
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155  CTCCAAGGGACAGAAAAGTGACGCCAATGCCCCCTTTGCCCAGTGGAGCACAGAGCGTGTGTGTGCATGGCTGG  1228

Query 1703  AGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCC  1776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1229  AGGACTTTGGCCTGGCTCAGTATGTGATCTTTGCCAGGCAGTGGGTATCTTCTGGCCACACCTTATTGACAGCC  1302

Query 1777  ACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAA  1850
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1303  ACCCCTCAGGACATGGAAAAGGAGCTAGGAATTAAGCACCCACTCCACAGGAAGAAGCTTGTTTTAGCAGTGAA  1376

Query 1851  AGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATA  1924
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377  AGCCATCAACACCAAACAGGAGGAGAAGTCTGCACTGCTAGACCACATTTGGGTGACAAGGTGGCTTGATGATA  1450

Query 1925  TTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACGGACGAATGCTGCAATACCTAACTGTG  1998
            |||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||
Sbjct 1451  TTGGCTTACCCCAGTACAAAGACCAGTTTCATGAATCTAGAGTTGACAGACGAATGCTGCAATACCTAACTGTG  1524

Query 1999  AACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCA  2072
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1525  AACGATTTACTCTTCTTAAAAGTCACCAGCCAACTACATCATCTCAGCATCAAATGTGCCATTCACGTGCTGCA  1598

Query 2073  TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTG  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1599  TGTCAACAAGTTCAACCCCCACTGCCTGCACCGGCGGCCAGCTGATGAGAGTAACCTTTCTCCTTCAGAAGTTG  1672

Query 2147  TACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGA  2220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1673  TACAGTGGTCCAACCACAGGGTGATGGAGTGGTTACGATCTGTGGACCTGGCAGAGTATGCACCCAATCTTCGA  1746

Query 2221  GGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAA  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1747  GGGAGTGGAGTCCATGGAGGCCTCATTATCCTGGAGCCACGCTTCACTGGGGACACCCTGGCTATGCTTCTCAA  1820

Query 2295  CATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTG  2368
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1821  CATCCCCCCACAAAAGACGCTCCTCAGGCGCCACCTGACCACCAAGTTCAATGCCTTGATTGGTCCGGAGGCTG  1894

Query 2369  AACAGGAAAAGCGAGAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGG  2442
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1895  AACAGGAGAAGCGAGAGAAAATGGCCTCACCAGCTTACACACCACTGACCACCACAGCCAAAGTCCGGCCAAGG  1968

Query 2443  AAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAAT  2516
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1969  AAACTAGGATTTTCACACTTCGGAAACATAAGAAAAAAGAAGTTCGATGAATCGACGGACTACATTTGCCCAAT  2042

Query 2517  GGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC  2590
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2043  GGAGCCCAGTGACGGTGTCAGTGATAGTCACAGGGTCTACAGTGGCTACCGGGGCCTCAGCCCCCTTGATGCCC  2116

Query 2591  CTGAACTGGATGGGCTGGACCAGGTGGGACAGATCAGC  2628
            ||||||||||||||||||||||||||||||||||.|||
Sbjct 2117  CTGAACTGGATGGGCTGGACCAGGTGGGACAGATTAGC  2154

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