Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07469
Subject:
XM_006539309.3
Aligned Length:
3567
Identities:
2622
Gaps:
735

Alignment

Query    1  ATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCA  74

Query   75  CCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct   75  CCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGC  148

Query  149  CAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGT  222
            ||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||
Sbjct  149  CAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGT  222

Query  223  TCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGG  296

Query  297  AGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGTGCGTT  370
            .||||||||||||||||.|||||||||||||||||||||.|||||||||||||||||||||||.|||||.||.|
Sbjct  297  TGGAGGCGGCTATAATACTAGCAAACATCGATGGCCTACAGGGGATAACATTCATGCAGAACACCAGGTACGCT  370

Query  371  CCATGGATGAACTGAATCATGATTTTCAAGCACTTGCTCTGGAGGGAAGAGCGATGGGAGAGCAGCTCTTGCCA  444
            |.|||||||||.|||||||||||||||||||||||||||||||.||.|||||.|||||.|              
Sbjct  371  CTATGGATGAATTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGGAGAGCTATGGGCG--------------  430

Query  445  GGTAAAAAGTTTTGGGAAACAGATGAATCCAGCAAAGATGGACCAAAAGGAATATTCCTGGGTGATCAATGGCG  518
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  519  AGACAGTGCCTGGGGAACATCAGATCATTCAGTTTCCCAGCCAATCATGGTGCAGAGAAGACCTGGTCAGAGTT  592
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  593  TCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCCCACGATCGGAGAGTGGGGGACTAGGCGTTAGCATGGTG  666
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  667  GAGTATGTGTTGAGCTCATCCCCGGGCGATTCCTGTCTAAGAAAAGGAGGATTTGGCCCAAGGGATGCAGACAG  740
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  741  TGATGAAAACGACAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGGAGATAAGCTAGGAGATTTGAAGGAGG  814
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  815  AGGGTGATGTGATGGACAAGACCAATGGTTTACCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTTTAGC  888
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  889  CGTACCCCTGGTAATTGCCAGAACTCTGCTAATGAAGTGGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGG  962
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  963  CTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCC  1036
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query 1037  CCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTTCAGTTTGATTATTCAGGCACGCAGGTACCTGTGGAC  1110
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query 1111  TCAGCAGCAGCAACTGTGGGACTTTTTGACTACAATTCTCAACAACAGCTGTTCCAAAGACCTAATGCGCTTGC  1184
                                                          ||||.|||||||||||.|||||.|||||
Sbjct  431  ----------------------------------------------AGCTATTCCAAAGACCCAATGCACTTGC  458

Query 1185  TGTCCAGCAGTTGACAGCTGCTCAGCAGCAGCAGTATGCACTGGCAGCTGCTCATCAGCCGCACATC---GGTT  1255
            |||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||.||||||   ||||
Sbjct  459  TGTTCAGCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCACCAGCCTCACATCGCAGGTT  532

Query 1256  TAGCTCCCGCTGCGTTTGTCCCCAATCCATACATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTACACAGCT  1329
            |||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  533  TAGCTCCCGCTGCGTTTGTCCCCAACCCATACATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTACACAGCT  606

Query 1330  GGATTGGCTGCAGCAGCGACACTAGGCCCAGCTGTGGTCCCTCACCAGTATTATGGAGTTACTCCCTGGGGAGT  1403
            |||||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.||
Sbjct  607  GGATTGGCTGCAGCAGCGACACTCGGCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCACGCCATGGGGTGT  680

Query 1404  CTACCCTGCCAGTCTTTTCCAGCAGCAAGCTGCCGCTGCCGCTGCAGCAACTAATTCAGCTAATCAACAGACCA  1477
            |||||||||||||||.|||||||||||.||.||.||.||.||.|||||.||.||.||.||||.|||.||||.|.
Sbjct  681  CTACCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCTACTCAGCAGAGCG  754

Query 1478  CCCCACAGGCTCAGCAAGGACAGCAGCAGGTTCTCCGTGGAGGAGCCAGCCAACGTCCTTTGACCCCAAACCAG  1551
            |.||.|||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||.|||
Sbjct  755  CTCCGCAGGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCAAATCAG  828

Query 1552  AACCAGCAGGGACAGCAAACGGATCCCCTTGTGGCAGCTGCAGCAGTGAATTCTGCCCTTGCATTTGGACAAGG  1625
            ||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||.|||||||||||
Sbjct  829  AACCAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGG  902

Query 1626  TCTGGCAGCAGGCATGCCAGGTTATCCGGTGTTGGCTCCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTAG  1699
            ..||||.|||||.||||||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.|
Sbjct  903  ATTGGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTGG  976

Query 1700  TGAATGCAGGCGCGAGAAATGGTCTTGGAGCTCCTGTTCGACTTGTAGCTCCTGCCCCAGTCATCATTAGTTCC  1773
            ||||||||||.||.||||||||.||.||||||||.||.||.|||||.|||||.|||||||||||||||||.|||
Sbjct  977  TGAATGCAGGGGCAAGAAATGGCCTCGGAGCTCCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCC  1050

Query 1774  TCAGCTGCACAAGCAGCTGTTGCAGCAGCCGCAGCTTCAGCAAATGGAGCAGCTGGTGGTCTTGCTGGAACAAC  1847
            ||||||||||||||||||||||||||.||.|||||.||||||||.||||||||||||||||||||.|||||.||
Sbjct 1051  TCAGCTGCACAAGCAGCTGTTGCAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTGGTCTTGCCGGAACTAC  1124

Query 1848  AAATGGACCATTTCGCCCTTTAGGAACACAGCAGCCTCAGCCCCAGCCCCAGCAGCAGCCCAATAACAACCTGG  1921
            |||||||||||||||.||||||||.||.||||||||.|||||||||||.|||||||||||||.||||||.||||
Sbjct 1125  AAATGGACCATTTCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCCTCAGCAGCAGCCCAGTAACAATCTGG  1198

Query 1922  CATCCAGTTCTTTCTACGGCAACAACTCTCTGAACAGCAATTCACAGAGCAGCTCCCTCTTCTCCCAGGGCTCT  1995
            |.|||||.||||||||.||||||||||||||||.|||.||.||.||||||||||||||||||||.|||||||||
Sbjct 1199  CTTCCAGCTCTTTCTATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTCAGGGCTCT  1272

Query 1996  GCCCAGCCTGCCAACACATCCTTGGGATTCGGAAGTAGCAGTTCTCTCGGCGCCACCCTGGGATCCGCCCTTGG  2069
            ||.||||||||||||||.|||||||||||||||||.||||||||.||.||.||||||||||||||.||||||||
Sbjct 1273  GCACAGCCTGCCAACACGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCCTTGG  1346

Query 2070  AGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTG  2143
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347  AGGGTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTG  1420

Query 2144  ACCTTTATAAGAGGACATCGAGCAGCTTGACCCCCATTGGACACAGTTTTTATAACGGCCTTAGCTTTTCCTCC  2217
            |||||||||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||||||.|||||||
Sbjct 1421  ACCTTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTTATAGCAGCCTTAGCTATTCCTCC  1494

Query 2218  TCTCCTGGACCCGTGGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTCACAGACACCACCTCCTTCCCTCTC  2291
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495  TCTCCTGGACCCGTGGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTCACAGACACCACCTCCTTCCCTCTC  1568

Query 2292  TTCACATGGATCCTCTTCAAGCTTAAACCTGGGAGGACTCACGAACGGCAGTGGAAGATACATCTCTGCTGCTC  2365
            ||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||
Sbjct 1569  TTCACATGGATCCTCTTCAAGCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAAGATACATCTCTGCTGCTC  1642

Query 2366  CAGGCGCTGAAGCCAAGTACCGCAGTGCAAGCAGCGCCTCCAGCCTCTTCAGCCCGAGCAGCACTCTTTTCTCT  2439
            |.||.||.||||||||||||||||||||||||||.|||||||||||.||||||||.||||||||.|||||.|||
Sbjct 1643  CCGGTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCCTTTTTTCT  1716

Query 2440  TCCTCTCGTTTGCGATATGGAATGTCTGATGTCATGCCTTCTGGCAGGAGCAGGCTTTTGGAAGATTTTCGAAA  2513
            ||||||||||||||||||||||||||||||||.|||||.||||||||||||||.|||.||||||||||||||||
Sbjct 1717  TCCTCTCGTTTGCGATATGGAATGTCTGATGTTATGCCCTCTGGCAGGAGCAGACTTCTGGAAGATTTTCGAAA  1790

Query 2514  CAACCGGTACCCCAATTTACAACTGCGGGAGATTGCTGGACATATAATGGAATTTTCCCAAGACCAGCATGGGT  2587
            ||||||||||||.||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.|
Sbjct 1791  CAACCGGTACCCTAATTTACAACTGCGGGAGATTGCTGGGCATATAATGGAATTTTCTCAAGACCAGCATGGCT  1864

Query 2588  CCAGATTCATTCAGCTGAAACTGGAGCGTGCCACACCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAG  2661
            |.||||||||||||||||||||.||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct 1865  CTAGATTCATTCAGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAG  1938

Query 2662  GCTGCCTACCAACTCATGGTGGATGTGTTTGGTAATTACGTCATTCAGAAGTTCTTTGAATTTGGCAGTCTTGA  2735
            |||||.||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||||||.|||
Sbjct 1939  GCTGCGTACCAACTTATGGTGGATGTGTTTGGAAATTACGTCATTCAGAAGTTTTTTGAATTTGGCAGTCATGA  2012

Query 2736  ACAGAAGCTGGCTTTGGCAGAACGGATTCGAGGCCACGTCCTGTCATTGGCACTACAGATGTATGGCTGCCGTG  2809
            |||||||||||||.||||.|||||||||||||||||.|||||.|||||||||||.||||||||.||||||||.|
Sbjct 2013  ACAGAAGCTGGCTCTGGCTGAACGGATTCGAGGCCATGTCCTATCATTGGCACTGCAGATGTACGGCTGCCGAG  2086

Query 2810  TTATCCAGAAAGCTCTTGAGTTTATTCCTTCAGACCAGCAG------AATGAGATGGTTCGGGAACTAGATGGC  2877
            |.||||||||||||.|.|||||||||||.||||||||||||      ||.||||||||.|||||.|||||||||
Sbjct 2087  TCATCCAGAAAGCTTTGGAGTTTATTCCCTCAGACCAGCAGGTAATTAACGAGATGGTGCGGGAGCTAGATGGC  2160

Query 2878  CATGTCTTGAAGTGTGTGAAAGATCAGAATGGCAATCACGTGGTTCAGAAATGCATTGAATGTGTACAGCCCCA  2951
            ||||||.||||||||||||||||.|||||.|||||.||.|||||||||||.||||||||.||||||||||||||
Sbjct 2161  CATGTCCTGAAGTGTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTGTGTACAGCCCCA  2234

Query 2952  GTCTTTGCAATTTATCATCGATGCGTTTAAGGGACAGGTATTTGCCTTATCCACACATCCTTATGGCTGCCGAG  3025
            |||||||||.||||||||||||||.||.|||||.|||||.|||||.||.||.||.||.||.||.|||||..|.|
Sbjct 2235  GTCTTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAGGG  2308

Query 3026  TGATTCAGAGAATCCTGGAGCACTGTCTCCCTGACCAGACACTCCCTATTTTAGAGGAGCTTCACCAGCACACA  3099
            ||||.|||||.|||||.|||||||||||||||||||||||.|||||.||..|.|||||||||||||||||||||
Sbjct 2309  TGATCCAGAGGATCCTAGAGCACTGTCTCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTCACCAGCACACA  2382

Query 3100  GAGCAGCTTGTACAGGATCAATATGGAAATTATGTAATCCAACATGTACTGGAGCACGGTCGTCCTGAGGATAA  3173
            |||||||||||.||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||
Sbjct 2383  GAGCAGCTTGTGCAGGATCAGTATGGAAATTATGTAATCCAACATGTACTGGAGCATGGTCGTCCTGAGGATAA  2456

Query 3174  AAGCAAAATTGTAGCAGAAATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAATTTGCAAGCAATGTTGTGG  3247
            ||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 2457  AAGCAAAATTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAGCAATGTTGTGG  2530

Query 3248  AGAAGTGTGTTACTCACGCCTCACGTACGGAGCGCGCTGTGCTCATCGATGAGGTGTGCACCATGAACGACGGT  3321
            ||||||||||||||||||||||||||||.|||||.|||||||||||.|||||||||||||||||||||||||||
Sbjct 2531  AGAAGTGTGTTACTCACGCCTCACGTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCACCATGAACGACGGT  2604

Query 3322  CCCCACAGTGCCTTATACACCATGATGAAGGACCAGTATGCCAACTACGTGGTCCAGAAGATGATTGACGTGGC  3395
            ||||||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||||||.||.|||||
Sbjct 2605  CCCCACAGTGCCTTATACACCATGATGAAGGATCAGTATGCTAACTATGTGGTCCAGAAGATGATCGATGTGGC  2678

Query 3396  GGAGCCAGGCCAGCGGAAGATCGTCATGCATAAGATCCGGCCCCACATCGCAACTCTTCGTAAGTACACCTATG  3469
            .|||||.||.|||||||||||.||||||||.|||||||||||.|||||.||.||.|||||.|||||||||||||
Sbjct 2679  TGAGCCGGGTCAGCGGAAGATTGTCATGCACAAGATCCGGCCACACATTGCGACGCTTCGAAAGTACACCTATG  2752

Query 3470  GCAAGCACATTCTGGCCAAGCTGGAGAAGTACTACATGAAGAACGGTGTTGACTTAGGGCCCATCTGTGGCCCC  3543
            ||||||||||.|||||||||||.||||||||||||||||||||.||.||.|||||.||||||||.|||||.|||
Sbjct 2753  GCAAGCACATCCTGGCCAAGCTCGAGAAGTACTACATGAAGAATGGCGTGGACTTGGGGCCCATTTGTGGTCCC  2826

Query 3544  CCTAATGGTATCATC  3558
            |||||||||||||||
Sbjct 2827  CCTAATGGTATCATC  2841

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