Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07469
Subject:
XM_006539310.3
Aligned Length:
3564
Identities:
2622
Gaps:
732

Alignment

Query    1  ATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCA  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGAGCGTTGCATGTGTCTTGAAGAGAAAAGCAGTGCTTTGGCAGGACTCTTTCAGCCCCCACCTGAAACATCA  74

Query   75  CCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAAC  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct   75  CCCTCAAGAACCAGCTAATCCCAACATGCCTGTTGTTTTGACATCTGGAACAGGGTCGCAAGCGCAGCCACAGC  148

Query  149  CAGCTGCAAATCAGGCTCTTGCAGCTGGGACTCACTCCAGCCCTGTCCCAGGATCTATAGGAGTTGCAGGCCGT  222
            ||||||||||||||||||||||||||||.||.|||||||||||||||||||||||.||||||||||||||||||
Sbjct  149  CAGCTGCAAATCAGGCTCTTGCAGCTGGAACACACTCCAGCCCTGTCCCAGGATCCATAGGAGTTGCAGGCCGT  222

Query  223  TCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGG  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TCCCAGGACGACGCTATGGTGGACTACTTCTTTCAGAGGCAGCATGGTGAGCAGCTTGGGGGAGGAGGAAGTGG  296

Query  297  AGGAGGCGGCTATAATAATAGCAAACATCGATGGCCTACTGGGGATAACATTCATGCAGAACATCAGGTGCGTT  370
            .||||||||||||||||.|||||||||||||||||||||.|||||||||||||||||||||||.|||||.||.|
Sbjct  297  TGGAGGCGGCTATAATACTAGCAAACATCGATGGCCTACAGGGGATAACATTCATGCAGAACACCAGGTACGCT  370

Query  371  CCATGGATGAACTGAATCATGATTTTCAAGCACTTGCTCTGGAGGGAAGAGCGATGGGAGAGCAGCTCTTGCCA  444
            |.|||||||||.|||||||||||||||||||||||||||||||.||.|||||.|||||.|              
Sbjct  371  CTATGGATGAATTGAATCATGATTTTCAAGCACTTGCTCTGGAAGGGAGAGCTATGGGCG--------------  430

Query  445  GGTAAAAAGTTTTGGGAAACAGATGAATCCAGCAAAGATGGACCAAAAGGAATATTCCTGGGTGATCAATGGCG  518
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  519  AGACAGTGCCTGGGGAACATCAGATCATTCAGTTTCCCAGCCAATCATGGTGCAGAGAAGACCTGGTCAGAGTT  592
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  593  TCCATGTGAACAGTGAGGTCAATTCTGTACTGTCCCCACGATCGGAGAGTGGGGGACTAGGCGTTAGCATGGTG  666
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  667  GAGTATGTGTTGAGCTCATCCCCGGGCGATTCCTGTCTAAGAAAAGGAGGATTTGGCCCAAGGGATGCAGACAG  740
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  741  TGATGAAAACGACAAAGGTGAAAAGAAGAACAAGGGTACGTTTGATGGAGATAAGCTAGGAGATTTGAAGGAGG  814
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  815  AGGGTGATGTGATGGACAAGACCAATGGTTTACCAGTGCAGAATGGGATTGATGCAGACGTCAAAGATTTTAGC  888
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  889  CGTACCCCTGGTAATTGCCAGAACTCTGCTAATGAAGTGGATCTTCTGGGTCCAAACCAGAATGGTTCTGAGGG  962
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query  963  CTTAGCCCAGCTGACCAGCACCAATGGTGCCAAGCCTGTGGAGGATTTCTCCAACATGGAGTCCCAGAGTGTCC  1036
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query 1037  CCTTGGACCCCATGGAACATGTGGGCATGGAGCCTCTTCAGTTTGATTATTCAGGCACGCAGGTACCTGTGGAC  1110
                                                                                      
Sbjct  431  --------------------------------------------------------------------------  430

Query 1111  TCAGCAGCAGCAACTGTGGGACTTTTTGACTACAATTCTCAACAACAGCTGTTCCAAAGACCTAATGCGCTTGC  1184
                                                          ||||.|||||||||||.|||||.|||||
Sbjct  431  ----------------------------------------------AGCTATTCCAAAGACCCAATGCACTTGC  458

Query 1185  TGTCCAGCAGTTGACAGCTGCTCAGCAGCAGCAGTATGCACTGGCAGCTGCTCATCAGCCGCACATCGGTTTAG  1258
            |||.|||||||||||||||||.||||||||||||||||||||.|||||.||.||.|||||.|||||||||||||
Sbjct  459  TGTTCAGCAGTTGACAGCTGCCCAGCAGCAGCAGTATGCACTTGCAGCAGCCCACCAGCCTCACATCGGTTTAG  532

Query 1259  CTCCCGCTGCGTTTGTCCCCAATCCATACATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTACACAGCTGGA  1332
            ||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  533  CTCCCGCTGCGTTTGTCCCCAACCCATACATCATCAGCGCTGCTCCCCCAGGGACGGACCCCTACACAGCTGGA  606

Query 1333  TTGGCTGCAGCAGCGACACTAGGCCCAGCTGTGGTCCCTCACCAGTATTATGGAGTTACTCCCTGGGGAGTCTA  1406
            ||||||||||||||||||||.|||||||||||||||||||||||.|||||||||||.||.||.|||||.|||||
Sbjct  607  TTGGCTGCAGCAGCGACACTCGGCCCAGCTGTGGTCCCTCACCAATATTATGGAGTCACGCCATGGGGTGTCTA  680

Query 1407  CCCTGCCAGTCTTTTCCAGCAGCAAGCTGCCGCTGCCGCTGCAGCAACTAATTCAGCTAATCAACAGACCACCC  1480
            ||||||||||||.|||||||||||.||.||.||.||.||.|||||.||.||.||.||||.|||.||||.|.|.|
Sbjct  681  CCCTGCCAGTCTCTTCCAGCAGCAGGCAGCTGCAGCTGCAGCAGCTACAAACTCTGCTACTCAGCAGAGCGCTC  754

Query 1481  CACAGGCTCAGCAAGGACAGCAGCAGGTTCTCCGTGGAGGAGCCAGCCAACGTCCTTTGACCCCAAACCAGAAC  1554
            |.|||||.|||||.|||||||||||||||||.|||||||||||.|||||||||||||||||||||||.||||||
Sbjct  755  CGCAGGCCCAGCAGGGACAGCAGCAGGTTCTTCGTGGAGGAGCTAGCCAACGTCCTTTGACCCCAAATCAGAAC  828

Query 1555  CAGCAGGGACAGCAAACGGATCCCCTTGTGGCAGCTGCAGCAGTGAATTCTGCCCTTGCATTTGGACAAGGTCT  1628
            |||||||||||.|||||.|||||||||||.|||||||||||||||||||||||.|||||.|||||||||||..|
Sbjct  829  CAGCAGGGACAACAAACAGATCCCCTTGTAGCAGCTGCAGCAGTGAATTCTGCTCTTGCCTTTGGACAAGGATT  902

Query 1629  GGCAGCAGGCATGCCAGGTTATCCGGTGTTGGCTCCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTAGTGA  1702
            |||.|||||.||||||||||||||.||.|||||.|||||||||||||||||||||||||||||||||||.||||
Sbjct  903  GGCTGCAGGTATGCCAGGTTATCCAGTCTTGGCACCTGCTGCTTACTATGACCAAACTGGTGCCCTTGTGGTGA  976

Query 1703  ATGCAGGCGCGAGAAATGGTCTTGGAGCTCCTGTTCGACTTGTAGCTCCTGCCCCAGTCATCATTAGTTCCTCA  1776
            |||||||.||.||||||||.||.||||||||.||.||.|||||.|||||.|||||||||||||||||.||||||
Sbjct  977  ATGCAGGGGCAAGAAATGGCCTCGGAGCTCCAGTCCGGCTTGTTGCTCCAGCCCCAGTCATCATTAGCTCCTCA  1050

Query 1777  GCTGCACAAGCAGCTGTTGCAGCAGCCGCAGCTTCAGCAAATGGAGCAGCTGGTGGTCTTGCTGGAACAACAAA  1850
            |||||||||||||||||||||||.||.|||||.||||||||.||||||||||||||||||||.|||||.|||||
Sbjct 1051  GCTGCACAAGCAGCTGTTGCAGCGGCTGCAGCGTCAGCAAACGGAGCAGCTGGTGGTCTTGCCGGAACTACAAA  1124

Query 1851  TGGACCATTTCGCCCTTTAGGAACACAGCAGCCTCAGCCCCAGCCCCAGCAGCAGCCCAATAACAACCTGGCAT  1924
            ||||||||||||.||||||||.||.||||||||.|||||||||||.|||||||||||||.||||||.|||||.|
Sbjct 1125  TGGACCATTTCGACCTTTAGGCACCCAGCAGCCCCAGCCCCAGCCTCAGCAGCAGCCCAGTAACAATCTGGCTT  1198

Query 1925  CCAGTTCTTTCTACGGCAACAACTCTCTGAACAGCAATTCACAGAGCAGCTCCCTCTTCTCCCAGGGCTCTGCC  1998
            ||||.||||||||.||||||||||||||||.|||.||.||.||||||||||||||||||||.|||||||||||.
Sbjct 1199  CCAGCTCTTTCTATGGCAACAACTCTCTGAGCAGTAACTCCCAGAGCAGCTCCCTCTTCTCTCAGGGCTCTGCA  1272

Query 1999  CAGCCTGCCAACACATCCTTGGGATTCGGAAGTAGCAGTTCTCTCGGCGCCACCCTGGGATCCGCCCTTGGAGG  2072
            ||||||||||||||.|||||||||||||||||.||||||||.||.||.||||||||||||||.|||||||||||
Sbjct 1273  CAGCCTGCCAACACGTCCTTGGGATTCGGAAGCAGCAGTTCCCTTGGTGCCACCCTGGGATCGGCCCTTGGAGG  1346

Query 2073  GTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACC  2146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1347  GTTTGGAACAGCAGTTGCAAACTCCAACACTGGCAGTGGCTCCCGCCGTGACTCCCTGACTGGCAGCAGTGACC  1420

Query 2147  TTTATAAGAGGACATCGAGCAGCTTGACCCCCATTGGACACAGTTTTTATAACGGCCTTAGCTTTTCCTCCTCT  2220
            ||||||||||||||||||||||||||.||||||||||||||||||||||||.|.|||||||||.||||||||||
Sbjct 1421  TTTATAAGAGGACATCGAGCAGCTTGGCCCCCATTGGACACAGTTTTTATAGCAGCCTTAGCTATTCCTCCTCT  1494

Query 2221  CCTGGACCCGTGGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTCACAGACACCACCTCCTTCCCTCTCTTC  2294
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1495  CCTGGACCCGTGGGCATGCCTCTCCCTAGTCAGGGACCAGGACATTCACAGACACCACCTCCTTCCCTCTCTTC  1568

Query 2295  ACATGGATCCTCTTCAAGCTTAAACCTGGGAGGACTCACGAACGGCAGTGGAAGATACATCTCTGCTGCTCCAG  2368
            |||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||.|
Sbjct 1569  ACATGGATCCTCTTCAAGCTTAAACCTGGGAGGACTCACAAACGGCAGTGGAAGATACATCTCTGCTGCTCCCG  1642

Query 2369  GCGCTGAAGCCAAGTACCGCAGTGCAAGCAGCGCCTCCAGCCTCTTCAGCCCGAGCAGCACTCTTTTCTCTTCC  2442
            |.||.||||||||||||||||||||||||||.|||||||||||.||||||||.||||||||.|||||.||||||
Sbjct 1643  GTGCCGAAGCCAAGTACCGCAGTGCAAGCAGTGCCTCCAGCCTTTTCAGCCCCAGCAGCACCCTTTTTTCTTCC  1716

Query 2443  TCTCGTTTGCGATATGGAATGTCTGATGTCATGCCTTCTGGCAGGAGCAGGCTTTTGGAAGATTTTCGAAACAA  2516
            |||||||||||||||||||||||||||||.|||||.||||||||||||||.|||.|||||||||||||||||||
Sbjct 1717  TCTCGTTTGCGATATGGAATGTCTGATGTTATGCCCTCTGGCAGGAGCAGACTTCTGGAAGATTTTCGAAACAA  1790

Query 2517  CCGGTACCCCAATTTACAACTGCGGGAGATTGCTGGACATATAATGGAATTTTCCCAAGACCAGCATGGGTCCA  2590
            |||||||||.||||||||||||||||||||||||||.|||||||||||||||||.||||||||||||||.||.|
Sbjct 1791  CCGGTACCCTAATTTACAACTGCGGGAGATTGCTGGGCATATAATGGAATTTTCTCAAGACCAGCATGGCTCTA  1864

Query 2591  GATTCATTCAGCTGAAACTGGAGCGTGCCACACCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGGCT  2664
            |||||||||||||||||||.||||||||||||.|||||||||||||||||||||||||||||||||||||||||
Sbjct 1865  GATTCATTCAGCTGAAACTAGAGCGTGCCACAGCAGCTGAGCGCCAGCTTGTCTTCAATGAAATCCTCCAGGCT  1938

Query 2665  GCCTACCAACTCATGGTGGATGTGTTTGGTAATTACGTCATTCAGAAGTTCTTTGAATTTGGCAGTCTTGAACA  2738
            ||.||||||||.|||||||||||||||||.||||||||||||||||||||.||||||||||||||||.||||||
Sbjct 1939  GCGTACCAACTTATGGTGGATGTGTTTGGAAATTACGTCATTCAGAAGTTTTTTGAATTTGGCAGTCATGAACA  2012

Query 2739  GAAGCTGGCTTTGGCAGAACGGATTCGAGGCCACGTCCTGTCATTGGCACTACAGATGTATGGCTGCCGTGTTA  2812
            ||||||||||.||||.|||||||||||||||||.|||||.|||||||||||.||||||||.||||||||.||.|
Sbjct 2013  GAAGCTGGCTCTGGCTGAACGGATTCGAGGCCATGTCCTATCATTGGCACTGCAGATGTACGGCTGCCGAGTCA  2086

Query 2813  TCCAGAAAGCTCTTGAGTTTATTCCTTCAGACCAGCAG------AATGAGATGGTTCGGGAACTAGATGGCCAT  2880
            |||||||||||.|.|||||||||||.||||||||||||      ||.||||||||.|||||.||||||||||||
Sbjct 2087  TCCAGAAAGCTTTGGAGTTTATTCCCTCAGACCAGCAGGTAATTAACGAGATGGTGCGGGAGCTAGATGGCCAT  2160

Query 2881  GTCTTGAAGTGTGTGAAAGATCAGAATGGCAATCACGTGGTTCAGAAATGCATTGAATGTGTACAGCCCCAGTC  2954
            |||.||||||||||||||||.|||||.|||||.||.|||||||||||.||||||||.|||||||||||||||||
Sbjct 2161  GTCCTGAAGTGTGTGAAAGACCAGAACGGCAACCATGTGGTTCAGAAGTGCATTGAGTGTGTACAGCCCCAGTC  2234

Query 2955  TTTGCAATTTATCATCGATGCGTTTAAGGGACAGGTATTTGCCTTATCCACACATCCTTATGGCTGCCGAGTGA  3028
            ||||||.||||||||||||||.||.|||||.|||||.|||||.||.||.||.||.||.||.|||||..|.||||
Sbjct 2235  TTTGCAGTTTATCATCGATGCATTCAAGGGGCAGGTGTTTGCTTTGTCTACGCACCCGTACGGCTGTAGGGTGA  2308

Query 3029  TTCAGAGAATCCTGGAGCACTGTCTCCCTGACCAGACACTCCCTATTTTAGAGGAGCTTCACCAGCACACAGAG  3102
            |.|||||.|||||.|||||||||||||||||||||||.|||||.||..|.||||||||||||||||||||||||
Sbjct 2309  TCCAGAGGATCCTAGAGCACTGTCTCCCTGACCAGACCCTCCCCATCCTGGAGGAGCTTCACCAGCACACAGAG  2382

Query 3103  CAGCTTGTACAGGATCAATATGGAAATTATGTAATCCAACATGTACTGGAGCACGGTCGTCCTGAGGATAAAAG  3176
            ||||||||.||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct 2383  CAGCTTGTGCAGGATCAGTATGGAAATTATGTAATCCAACATGTACTGGAGCATGGTCGTCCTGAGGATAAAAG  2456

Query 3177  CAAAATTGTAGCAGAAATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAATTTGCAAGCAATGTTGTGGAGA  3250
            |||||||||||||||.|||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 2457  CAAAATTGTAGCAGAGATCCGAGGCAATGTACTTGTATTGAGTCAGCACAAGTTTGCAAGCAATGTTGTGGAGA  2530

Query 3251  AGTGTGTTACTCACGCCTCACGTACGGAGCGCGCTGTGCTCATCGATGAGGTGTGCACCATGAACGACGGTCCC  3324
            |||||||||||||||||||||||||.|||||.|||||||||||.||||||||||||||||||||||||||||||
Sbjct 2531  AGTGTGTTACTCACGCCTCACGTACAGAGCGTGCTGTGCTCATTGATGAGGTGTGCACCATGAACGACGGTCCC  2604

Query 3325  CACAGTGCCTTATACACCATGATGAAGGACCAGTATGCCAACTACGTGGTCCAGAAGATGATTGACGTGGCGGA  3398
            |||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||||||.||.|||||.||
Sbjct 2605  CACAGTGCCTTATACACCATGATGAAGGATCAGTATGCTAACTATGTGGTCCAGAAGATGATCGATGTGGCTGA  2678

Query 3399  GCCAGGCCAGCGGAAGATCGTCATGCATAAGATCCGGCCCCACATCGCAACTCTTCGTAAGTACACCTATGGCA  3472
            |||.||.|||||||||||.||||||||.|||||||||||.|||||.||.||.|||||.||||||||||||||||
Sbjct 2679  GCCGGGTCAGCGGAAGATTGTCATGCACAAGATCCGGCCACACATTGCGACGCTTCGAAAGTACACCTATGGCA  2752

Query 3473  AGCACATTCTGGCCAAGCTGGAGAAGTACTACATGAAGAACGGTGTTGACTTAGGGCCCATCTGTGGCCCCCCT  3546
            |||||||.|||||||||||.||||||||||||||||||||.||.||.|||||.||||||||.|||||.||||||
Sbjct 2753  AGCACATCCTGGCCAAGCTCGAGAAGTACTACATGAAGAATGGCGTGGACTTGGGGCCCATTTGTGGTCCCCCT  2826

Query 3547  AATGGTATCATC  3558
            ||||||||||||
Sbjct 2827  AATGGTATCATC  2838

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