Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07481
Subject:
NM_014722.5
Aligned Length:
3204
Identities:
1772
Gaps:
1431

Alignment

Query    1  ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT  74
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGATCATTAGAAGCCAGTCCTTTGCGGGTTT  74

Query   75  CAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAAAATTCCTCCGCTCTCAAGAAGCCTCAGG  148

Query  149  CCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCCCCCCAAAGAGCCTCAGCCTAAAAGGGTG  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCCCCCCAAAGAGCCTCAGCCTAAAAGGGTG  222

Query  223  GAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGGAGGTTCACCAGACGGAGCTGGACAAGTT  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGGAGGTTCACCAGACGGAGCTGGACAAGTT  296

Query  297  GACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTACTGTATGACCTAGACAAGCAAATTAAAA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTACTGTATGACCTAGACAAGCAAATTAAAA  370

Query  371  CAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGATGAACTCTATGAAGCTTATTGTATC  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGTAGATGAACTCTATGAAGCTTATTGTATC  444

Query  445  CAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCG  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCGCAACATCCCCTGCCAGCAAAGCTGCCCG  518

Query  519  GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAGAATATGTGCACCATTGAAGTGGAGCTAG  592

Query  593  AGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGGCTTTGCACGCCTCTGTCCTGGAGATCAA  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGGCTTTGCACGCCTCTGTCCTGGAGATCAA  666

Query  667  TATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGGCAAGCAGAG  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  TATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAGGCAAAATAGAAGTAAATGGCAAGCAGAG  740

Query  741  CTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAAAG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTCATCTCCATCAAGGTCACGGAGCTCAAAG  814

Query  815  GGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGCCCGACCTCAGGTA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAAAGAGCTGTTTGCAGCCCGACCTCAGGTA  888

Query  889  GTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGGAAATCACCTGGTATCCATTTGACGTGGA  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  GTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGGAAATCACCTGGTATCCATTTGACGTGGA  962

Query  963  GGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATGTACAGCCAGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTTCAGAGGAGAATGTCCATGTACAGCCAGG  1036

Query 1037  GTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT----------------------------------  1076
            ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct 1037  GTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTAGGTGGCTGCATCCTTCCCCAGACAAGCCCAGG  1110

Query 1077  --------------------------------------------------------------------------  1076
                                                                                      
Sbjct 1111  CGGCTGTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCCAAGCTGCACCGCAGCCGCTCCTTCAGTGACCT  1184

Query 1077  ------------------------------------------TTCAAATCTACCTGATGACATCTTTGAAAATG  1108
                                                      ||||||||||||||||||||||||||||||||
Sbjct 1185  GCCCTCCCTCAGGCCGAGTCCCAAGGCCGTGCTAGAGCTCTATTCAAATCTACCTGATGACATCTTTGAAAATG  1258

Query 1109  GAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCTCACC  1182
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  GAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCTCACC  1332

Query 1183  TCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTACCATCACCCCTGCGGAGTTTAACCTCAG  1256
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  TCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTACCATCACCCCTGCGGAGTTTAACCTCAG  1406

Query 1257  CAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAGAAGGCC  1330
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATCTTCCAGGAACTCCCTGGGAGAAGGCC  1480

Query 1331  AAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGGCCCCATCTGAGGCT  1404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  AAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGGCCCCATCTGAGGCT  1554

Query 1405  TGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCA  1478
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAGCACTTCTGCA  1628

Query 1479  AGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTCGGAAGGAAACATCACAAAGCAGCTGG  1552
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTCGGAAGGAAACATCACAAAGCAGCTGG  1702

Query 1553  TCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCTCTGAGGGTTCTGTTGGTGGAGAA  1626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  TCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCTCTGAGGGTTCTGTTGGTGGAGAA  1776

Query 1627  TCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTTTTAATGGGCTTTTACTTGCATTAGAACC  1700
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTTTTAATGGGCTTTTACTTGCATTAGAACC  1850

Query 1701  ACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTGGANGATATTCTAAAA---A  1771
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||   |
Sbjct 1851  ACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTGGATGATATTCTAAAATGCA  1924

Query 1772  AG------------------------------------------------------------------------  1773
            ||                                                                        
Sbjct 1925  AGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAAGTCTCACAGTTGAAAGTGCTTTAGAAAGCTTTGATTTC  1998

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 1999  CTGAACACCTCTGATTTTGACGAGGAGGAGGATGGTGATGAGGTTTGTAATGTTGGCGGAGGTGCTGACTCAGT  2072

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2073  ATTTTCAGACACTGAGACTGAGAAACACAGTTACAGGTCGGTTCACCCAGAAGCCAGGGGGCATCTCAGTGAAG  2146

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2147  CGCTCACTGAAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTCCTCTCCCACTGACCACAGGCAACGAGAGC  2220

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2221  CTGGACATCACCATCGTCAGGCACCTCCAGTACTGCACCCAACTCGTGCAGCAAATTGTTTTCTCAAGCAAAAC  2294

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2295  CCCATTTGTGGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATCCAAGTGATGGAGAAACTCGCAGCTGTCA  2368

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2369  GTGATGAGAACATAGGAAATATCAGTTCTGTTGTGGAAGCCATACCAGAATTTCACAAAAAGCTGTCTTTGCTG  2442

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2443  TCATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCCCAGCGGACAGAGTGATGAAGCAGCTGGA  2516

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2517  GGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCAGACCCAGTGTTTCGAACCCTGGTGTCCC  2590

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2591  AAATTCTGGACCGGGCTGAGCCTCTGCTTTCCTCCAGCCTGTCCTCGGAAGTCGTCACTGTTTTCCAGTATTAC  2664

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2665  AGTTACTTCACCAGCCACGGCGTCAGTGACCTGGAGAGTTACCTGAGCCAGCTGGCCAGGCAAGTTTCCATGGT  2738

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2739  TCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACAAACCATGAGTGACCTTGCTCCCAGCAACCTCCTGG  2812

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2813  CCCAGCAGGAAGTACTCAGGACTCTGGCTCTGCTATTAACCAGAGAGGACAACGAAGTTAGTGAGGCTGTGACG  2886

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2887  CTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGGCCTTGCTCTATTACTGTGAAGCACTAAC  2960

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2961  AAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGAAAATCCTTGAGGCTACTGAAAGCATTAAAA  3034

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3035  TGCTGGTGACATTGTGTCAATCTGATACTGAAGAAATCAGAAATGTGGCCTCAGAAACCCTCTTGTCTCTGGGA  3108

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3109  GAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCTCGAGACTGTGTTAAAGTCGGAGGTCGTCATGG  3182

Query 1774  ----------------------  1773
                                  
Sbjct 3183  AACTGAAGTTGCCACAGCCTTT  3204

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