Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07481
Subject:
XM_006516587.3
Aligned Length:
3292
Identities:
1492
Gaps:
1550

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTGTTGCCTTCGCGATTGCACTGGATCAGAAACAGGCCATGGAGGGACAGGATCCGGAGGCGGCGGCTCCA  74

Query    1  ----------------------------ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA  46
                                        |||.||||.|||||||||||.||.||.|||||.|||||||||||.|
Sbjct   75  CCGACTGCCAACCAGACTCCCAGAAATCATGCTGGTGGGATCCCAGTCCTTCTCTCCTGGCGGGCCCAATGGCA  148

Query   47  TCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAA  120
            ||||..|.|||||||||||.||.||||||||.||.||.|||||||||||.||||||||||||||||||||||||
Sbjct  149  TCATCCGGAGCCAGTCCTTCGCAGGTTTCAGTGGGCTGCAGGAAAGGCGGTCCAGGTGTAACTCCTTCATTGAA  222

Query  121  AATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCC  194
            |||.||||.|||||||||||||||||||||||.||||||||||||||.|||.|.||.||||||||.|||||..|
Sbjct  223  AATGCCTCGGCTCTCAAGAAGCCTCAGGCCAAGCTGAAGAAAATGCATAATCTTGGACACAAAAATAACAACAC  296

Query  195  CCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGG  268
            .|||||.|||||||||||.||.||.|||||.||.||||||.||||||||||.||.||.||||||||.||.||||
Sbjct  297  TCCCAAGGAGCCTCAGCCGAAGAGAGTGGAGGAGGTCTACCGGGCCTTGAAGAACGGGCTTGATGAGTACCTGG  370

Query  269  AGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTA  342
            ||.||||||||||||||||||||||.|||||.|||||.||||||||||||||.||||||||||||||||||||.
Sbjct  371  AGTTTCACCAGACGGAGCTGGACAAATTGACTGCTCAATTAAAAGATATGAAGAGAAACTCTCGCCTGGGTGTG  444

Query  343  CTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGT  416
            |||||||||||||||||||||||||||||.|||||.|||||||||.||||||||||||||||.||.||||||||
Sbjct  445  CTGTATGACCTAGACAAGCAAATTAAAACGATTGAGAGATACATGCGACGCCTGGAGTTTCACATTAGTAAGGT  518

Query  417  AGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  490
            |||.||.|||||||||||.|||||||||||.||.||.|||||.|||||||||||||||||||||||||||||||
Sbjct  519  AGACGAGCTCTATGAAGCCTATTGTATCCAACGGCGTCTCCAAGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  592

Query  491  CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAG  564
            |.||.||||||||||||||.||||||||||||||||||.|.||||||||.||.||||.||||||.|||||.|||
Sbjct  593  CGACGTCCCCTGCCAGCAAGGCTGCCCGGGAGAGTCTGTCTGAGATCAACCGCAGCTACAAGGAATACACGGAG  666

Query  565  AATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  638
            ||.|||||..|||||||||.||||.|.||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AACATGTGTGCCATTGAAGCGGAGTTGGAGAGTCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  740

Query  639  CTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAG  712
            ||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||.|||||||||||||.|
Sbjct  741  CTTTGCCCGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGTCGGCAGAGGTGGAAACTGAAGG  814

Query  713  GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTC  786
            |||||||||||||.|||||.||.||||||||||||||||.||||||.||.||.||||||||.||||||||||||
Sbjct  815  GCAAAATAGAAGTGAATGGTAAACAGAGCTGGGATGGAGCAGAAACCGTCTTCCTGCCCCTCATAGTTGGGTTC  888

Query  787  ATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAA  860
            ||.||.|||||||||||.||.||||||||.||.||.|||||||||||||||||.||.||||||||.||||||||
Sbjct  889  ATTTCAATCAAGGTCACAGAACTCAAAGGACTGGCGACTCACATCCTGGTAGGCAGTGTGACCTGCGAGACCAA  962

Query  861  AGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  934
            |||||||||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAGCTGTTTGCAGCCCGACCCCAGGTGGTGGCTGTTGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  1036

Query  935  AAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTT  1008
            ||||||||||||||||.||||||||||||||||..|||.||||.||.|||.|||||||||||.||||.||.||.
Sbjct 1037  AAATCACCTGGTATCCCTTTGACGTGGAGGACACAACCCCATCGTCGGGCCCTGGGAACAAGACAGCTGCTCTC  1110

Query 1009  CAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT------  1076
            |||.|.||.||||||||||||||||||||.|||||.|||||.||.||||||||||||||.||||||||      
Sbjct 1111  CAGCGAAGGATGTCCATGTACAGCCAGGGCACCCCAGAAACACCTACCTTCAAAGACCAGTCCTTCTTTAGATG  1184

Query 1077  --------------------------------------------------------------------------  1076
                                                                                      
Sbjct 1185  GTTGCGGCTGTCTGTCTTGAGTGCCTTGCGAGACACTTTCTTTGCCACGTTGCACCACAACCACTCTGTCGGTG  1258

Query 1077  ----------------------------------------------TTCAAATCTACCTGATGACATCTTTGAA  1104
                                                          |||||||||.||.||||||||||||||.
Sbjct 1259  ACCTGCCTTCCCTCAGCCTGAACCCCAAGGCCCTGCTAGAATTCTATTCAAATCTGCCAGATGACATCTTTGAG  1332

Query 1105  AATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACCTGCCCAACGGGGACTGCGCCCT  1178
            |.|||||||||.||.||||||||||.|||||||||.|||||||||||||||||||...|.||.|||||.|.|.|
Sbjct 1333  AGTGGAAAGGCTGCAGAGGAGAAAAGGCCACTGTCCCTCAGCTTCAGTGACCTGCAGGATGGAGACTGTGTCTT  1406

Query 1179  CACCTCCCACTCAACAGGCTCCCCTTCCA------ACTCAACAAATCCAGAAATTACCATCACCCCTGCGGAGT  1246
            |||||||..||||.|...||||||.||||      |||||.|..|||||||.||||||||||||||.||.|||.
Sbjct 1407  CACCTCCAGCTCAGCCACCTCCCCCTCCAGTTCACACTCAGCCCATCCAGAGATTACCATCACCCCCGCAGAGC  1480

Query 1247  TTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCATCTTCCAGGAACTCCCTG  1320
            |||.||.|||||||.||.||||.||.||||||||.|..||.||||.|||||||||.|||||||||||.|||.||
Sbjct 1481  TTACCCACAGCAGCCTGTCCTCACAAAATGAGGGCACCGAGGACAGCAGCTCAGCGTCTTCCAGGAATTCCTTG  1554

Query 1321  GGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAGAAAACCTGCCTCGGCCCC  1394
            ||.||.|.|||.|||||.|||||.|||| .||.|||  .||..|.|..||||||.|.||.||.|          
Sbjct 1555  GGTGAGGACCATGAGCCCAAGTCCCACC-CAAAGAG--TGATACGGTAGAGCCCGGGAAGCCGG----------  1615

Query 1395  ATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTGAGAATGATGTTGCAGAAG  1468
              .||.||||        |||      |||| ||||..|.|||..||||||.||.||||.|..|||.||.||.|
Sbjct 1616  --GTGTGGCT--------ACA------AGGT-CTGGTACCGAGAGCCTGTTTCTGGAGAGTAGTGTGGCCGAGG  1672

Query 1469  CACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACTTCGGAAGGAAACATCACA  1542
            |.||.|||||.||.||.||.||||||||||||||||||||.||||||||||||||||..|||||||||||||||
Sbjct 1673  CTCTCCTGCAGGAATCGGATGAGGCCTCTGAGCTCAAGCCCGTGGAACTGGACACTTTTGAAGGAAACATCACA  1746

Query 1543  AAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCTGCTCTCTGAGGGTTCTGT  1616
            |||||.|||||.|||||||||||.||.||.||||.|||..|..|.||.||||.|||..|||.|||.||.|||||
Sbjct 1747  AAGCAACTGGTGAAGAGGCTCACCTCGGCTGAGGGGCCCGTCACTACTGACAAGCTTTTCTTTGAAGGCTCTGT  1820

Query 1617  TGGTGGAGAATCTGAAGGCT-GCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTTTTAATGGGCTTTTACTT  1689
            ||||.|.||.|||| ||||| ||.|.||||||||.|||||.|||.|.||.|||||.||.|||||.||.||.|||
Sbjct 1821  TGGTAGCGAGTCTG-AGGCTGGCCGGTCCTTTCTGGATGGCAGCCTGGAAGATGCCTTCAATGGACTCTTCCTT  1893

Query 1690  GCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTCATGAATTTGGANGATAT  1763
            ||||||||.|||||.||..|||||||.||||||||.||||||||||||||||||||||...|.|||||.|||.|
Sbjct 1894  GCATTAGACCCACACAAGAAGCAGTACAAAGAGTTCCAGGATCTGAACCAAGAAGTCACTCACTTGGATGATGT  1967

Query 1764  TCTAAAA---AAG-------------------------------------------------------------  1773
            |||.|||   |||                                                             
Sbjct 1968  TCTCAAATGCAAGCCGGCTGGCAGCCGCAGCAGGTCTTCCAGCCTAAGTCTGACGGTTGAGAGTGCTTTAGAAA  2041

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2042  GCTTTGATTTCCTCAACACCTCTGACTTTGACGAAGAGGAAGAGGATGGCGATGACGTCTGCCACGTTGGAGGA  2115

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2116  GGCGCAGACTCCGTGTTTTCAGATACTGAGACTGAGAAGAGTGGTTACAGGTCAGTTCACCCGGAAGCCAGGGG  2189

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2190  TCACCTTAGCGAGGCTCTGACTGAAGACACAGGTGTAGGCACCAGTGTGGCAGGAAGCCCGCTCCCACTCACCA  2263

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2264  CAGGAAATGAGAGCCTGGACATCACCATAGTCAAACATCTACAATACTGCACCCAGCTCATCCAGCAAATCGTC  2337

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2338  TTCTCTAGCAAAACCCCCTTTGTGGCAAGAAGTCTCTTGGAGAAGCTGTCGAGGCAGGTCCTTGTGATGCAGAA  2411

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2412  GCTGGCAGCCGTGAGTGACGAGAACCTCGGGAACATCACCTCTGTGGTGGAAGCCATACCAGAATTTCACAAAA  2485

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2486  AGCTCTCCTTGCTGGCCTTCTGGACCAAATGCTGCAGCCCCAGCGGGGTCTACCACAGCTCCGCTGCCCGCCTC  2559

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2560  ATCAAGCAGCTGGAGGCCAGCTTCGCCAGAAGCATCAACAAAGACTATCCAGGACTGGCAGAGCCAGTGTTTAG  2633

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2634  AACCCTGGTGTCCCAAATCCTGGACCGAGCTGAACCTCTCCTTTCCTCCAGCCTCTCGTCGGAAGTCATCACTG  2707

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2708  TCTTCCAGTACTACAGCTTCTTCACCAGCCACGGTGTGAGTGACCTGGAGACTTACCTGGGCCAGCTAACCAGG  2781

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2782  CAAGTTGCCATGGTTCAGACTCTGCAGTCACTGAGAGATGAGAAACTGCTGCAGACTATGAGCGACCTTGCACC  2855

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2856  CAGCAACCTCCCCGCTCAACAGGAAGTCCTCAGGACGCTGGCCCTGCTGCTCACCAGGGATGACAATGAGGTCA  2929

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2930  GCGAAGCTGTGACACTCTACTTGGCAGCAGCCTCCAAAAATGAGCACTTCAGAGAAAAGGCCTTGCTCTATTAT  3003

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3004  TGCGAAGCACTAACGAAGGCCAATCTCCAGCTACAGAAGGCAGCATGTCTGGCCCTAAAGAGCCTGGAGGCCAC  3077

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3078  CGAAAGCATTAAAATGCTAGTGACGTTGTGTCAGTCTGACACTGAAGAAATCAGAACCGTGGCCTCGGAAACCC  3151

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3152  TCCTCTCTCTTGGAGAAGACGGGCGACTGGCGTACGAGCAATTAGACAAATTCCCTCGAGATTGTGTTAAAGTG  3225

Query 1774  ------------------------------------  1773
                                                
Sbjct 3226  GGAGGTCGTCATGGAACCGAAGTTGCCACAGCCTTT  3261

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