Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07481
Subject:
XM_006516592.3
Aligned Length:
3166
Identities:
1492
Gaps:
1424

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTGTTGCCTTCGCGATTGCACTGGATCAGAAACAGGCCATGGAGGGACAGGATCCGGAGGCGGCGGCTCCA  74

Query    1  ----------------------------ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA  46
                                        |||.||||.|||||||||||.||.||.|||||.|||||||||||.|
Sbjct   75  CCGACTGCCAACCAGACTCCCAGAAATCATGCTGGTGGGATCCCAGTCCTTCTCTCCTGGCGGGCCCAATGGCA  148

Query   47  TCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAA  120
            ||||..|.|||||||||||.||.||||||||.||.||.|||||||||||.||||||||||||||||||||||||
Sbjct  149  TCATCCGGAGCCAGTCCTTCGCAGGTTTCAGTGGGCTGCAGGAAAGGCGGTCCAGGTGTAACTCCTTCATTGAA  222

Query  121  AATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCC  194
            |||.||||.|||||||||||||||||||||||.||||||||||||||.|||.|.||.||||||||.|||||..|
Sbjct  223  AATGCCTCGGCTCTCAAGAAGCCTCAGGCCAAGCTGAAGAAAATGCATAATCTTGGACACAAAAATAACAACAC  296

Query  195  CCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGG  268
            .|||||.|||||||||||.||.||.|||||.||.||||||.||||||||||.||.||.||||||||.||.||||
Sbjct  297  TCCCAAGGAGCCTCAGCCGAAGAGAGTGGAGGAGGTCTACCGGGCCTTGAAGAACGGGCTTGATGAGTACCTGG  370

Query  269  AGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTA  342
            ||.||||||||||||||||||||||.|||||.|||||.||||||||||||||.||||||||||||||||||||.
Sbjct  371  AGTTTCACCAGACGGAGCTGGACAAATTGACTGCTCAATTAAAAGATATGAAGAGAAACTCTCGCCTGGGTGTG  444

Query  343  CTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGT  416
            |||||||||||||||||||||||||||||.|||||.|||||||||.||||||||||||||||.||.||||||||
Sbjct  445  CTGTATGACCTAGACAAGCAAATTAAAACGATTGAGAGATACATGCGACGCCTGGAGTTTCACATTAGTAAGGT  518

Query  417  AGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  490
            |||.||.|||||||||||.|||||||||||.||.||.|||||.|||||||||||||||||||||||||||||||
Sbjct  519  AGACGAGCTCTATGAAGCCTATTGTATCCAACGGCGTCTCCAAGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  592

Query  491  CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAG  564
            |.||.||||||||||||||.||||||||||||||||||.|.||||||||.||.||||.||||||.|||||.|||
Sbjct  593  CGACGTCCCCTGCCAGCAAGGCTGCCCGGGAGAGTCTGTCTGAGATCAACCGCAGCTACAAGGAATACACGGAG  666

Query  565  AATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  638
            ||.|||||..|||||||||.||||.|.||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AACATGTGTGCCATTGAAGCGGAGTTGGAGAGTCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  740

Query  639  CTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAG  712
            ||||||.||||||||||||||||||||||||||||||||||||||||||||.||||||.|||||||||||||.|
Sbjct  741  CTTTGCCCGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGTCGGCAGAGGTGGAAACTGAAGG  814

Query  713  GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTC  786
            |||||||||||||.|||||.||.||||||||||||||||.||||||.||.||.||||||||.||||||||||||
Sbjct  815  GCAAAATAGAAGTGAATGGTAAACAGAGCTGGGATGGAGCAGAAACCGTCTTCCTGCCCCTCATAGTTGGGTTC  888

Query  787  ATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAA  860
            ||.||.|||||||||||.||.||||||||.||.||.|||||||||||||||||.||.||||||||.||||||||
Sbjct  889  ATTTCAATCAAGGTCACAGAACTCAAAGGACTGGCGACTCACATCCTGGTAGGCAGTGTGACCTGCGAGACCAA  962

Query  861  AGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  934
            |||||||||||||||||||||.|||||.||||||||.|||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAGCTGTTTGCAGCCCGACCCCAGGTGGTGGCTGTTGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  1036

Query  935  AAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTT  1008
            ||||||||||||||||.||||||||||||||||..|||.||||.||.|||.|||||||||||.||||.||.||.
Sbjct 1037  AAATCACCTGGTATCCCTTTGACGTGGAGGACACAACCCCATCGTCGGGCCCTGGGAACAAGACAGCTGCTCTC  1110

Query 1009  CAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTTCAAA  1082
            |||.|.||.||||||||||||||||||||.|||||.|||||.||.||||||||||||||.||||||||||||||
Sbjct 1111  CAGCGAAGGATGTCCATGTACAGCCAGGGCACCCCAGAAACACCTACCTTCAAAGACCAGTCCTTCTTTTCAAA  1184

Query 1083  TCTACCTGATGACATCTTTGAAAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGACC  1156
            |||.||.||||||||||||||.|.|||||||||.||.||||||||||.|||||||||.||||||||||||||||
Sbjct 1185  TCTGCCAGATGACATCTTTGAGAGTGGAAAGGCTGCAGAGGAGAAAAGGCCACTGTCCCTCAGCTTCAGTGACC  1258

Query 1157  TGCCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCCA------ACTCAACAAATCCAGAA  1224
            |||...|.||.|||||.|.|.||||||||..||||.|...||||||.||||      |||||.|..|||||||.
Sbjct 1259  TGCAGGATGGAGACTGTGTCTTCACCTCCAGCTCAGCCACCTCCCCCTCCAGTTCACACTCAGCCCATCCAGAG  1332

Query 1225  ATTACCATCACCCCTGCGGAGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTC  1298
            ||||||||||||||.||.|||.|||.||.|||||||.||.||||.||.||||||||.|..||.||||.||||||
Sbjct 1333  ATTACCATCACCCCCGCAGAGCTTACCCACAGCAGCCTGTCCTCACAAAATGAGGGCACCGAGGACAGCAGCTC  1406

Query 1299  AGCATCTTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGC  1372
            |||.|||||||||||.|||.||||.||.|.|||.|||||.|||||.|||| .||.|||  .||..|.|..||||
Sbjct 1407  AGCGTCTTCCAGGAATTCCTTGGGTGAGGACCATGAGCCCAAGTCCCACC-CAAAGAG--TGATACGGTAGAGC  1477

Query 1373  CCAGAAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTC  1446
            ||.|.||.||.|            .||.||||        |||      |||| ||||..|.|||..||||||.
Sbjct 1478  CCGGGAAGCCGG------------GTGTGGCT--------ACA------AGGT-CTGGTACCGAGAGCCTGTTT  1524

Query 1447  CTTGAGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGA  1520
            ||.||||.|..|||.||.||.||.||.|||||.||.||.||.||||||||||||||||||||.|||||||||||
Sbjct 1525  CTGGAGAGTAGTGTGGCCGAGGCTCTCCTGCAGGAATCGGATGAGGCCTCTGAGCTCAAGCCCGTGGAACTGGA  1598

Query 1521  CACTTCGGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACA  1594
            |||||..||||||||||||||||||||.|||||.|||||||||||.||.||.||||.|||..|..|.||.||||
Sbjct 1599  CACTTTTGAAGGAAACATCACAAAGCAACTGGTGAAGAGGCTCACCTCGGCTGAGGGGCCCGTCACTACTGACA  1672

Query 1595  GGCTGCTCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCT-GCAGATCCTTTCTAGATGGAAGCTTAGAGGA  1667
            .|||..|||.|||.||.|||||||||.|.||.|||| ||||| ||.|.||||||||.|||||.|||.|.||.||
Sbjct 1673  AGCTTTTCTTTGAAGGCTCTGTTGGTAGCGAGTCTG-AGGCTGGCCGGTCCTTTCTGGATGGCAGCCTGGAAGA  1745

Query 1668  TGCTTTTAATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAG  1741
            |||.||.|||||.||.||.|||||||||||.|||||.||..|||||||.||||||||.||||||||||||||||
Sbjct 1746  TGCCTTCAATGGACTCTTCCTTGCATTAGACCCACACAAGAAGCAGTACAAAGAGTTCCAGGATCTGAACCAAG  1819

Query 1742  AAGTCATGAATTTGGANGATATTCTAAAA---AAG---------------------------------------  1773
            ||||||...|.|||||.|||.||||.|||   |||                                       
Sbjct 1820  AAGTCACTCACTTGGATGATGTTCTCAAATGCAAGCCGGCTGGCAGCCGCAGCAGGTCTTCCAGCCTAAGTCTG  1893

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 1894  ACGGTTGAGAGTGCTTTAGAAAGCTTTGATTTCCTCAACACCTCTGACTTTGACGAAGAGGAAGAGGATGGCGA  1967

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 1968  TGACGTCTGCCACGTTGGAGGAGGCGCAGACTCCGTGTTTTCAGATACTGAGACTGAGAAGAGTGGTTACAGGT  2041

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2042  CAGTTCACCCGGAAGCCAGGGGTCACCTTAGCGAGGCTCTGACTGAAGACACAGGTGTAGGCACCAGTGTGGCA  2115

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2116  GGAAGCCCGCTCCCACTCACCACAGGAAATGAGAGCCTGGACATCACCATAGTCAAACATCTACAATACTGCAC  2189

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2190  CCAGCTCATCCAGCAAATCGTCTTCTCTAGCAAAACCCCCTTTGTGGCAAGAAGTCTCTTGGAGAAGCTGTCGA  2263

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2264  GGCAGGTCCTTGTGATGCAGAAGCTGGCAGCCGTGAGTGACGAGAACCTCGGGAACATCACCTCTGTGGTGGAA  2337

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2338  GCCATACCAGAATTTCACAAAAAGCTCTCCTTGCTGGCCTTCTGGACCAAATGCTGCAGCCCCAGCGGGGTCTA  2411

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2412  CCACAGCTCCGCTGCCCGCCTCATCAAGCAGCTGGAGGCCAGCTTCGCCAGAAGCATCAACAAAGACTATCCAG  2485

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2486  GACTGGCAGAGCCAGTGTTTAGAACCCTGGTGTCCCAAATCCTGGACCGAGCTGAACCTCTCCTTTCCTCCAGC  2559

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2560  CTCTCGTCGGAAGTCATCACTGTCTTCCAGTACTACAGCTTCTTCACCAGCCACGGTGTGAGTGACCTGGAGAC  2633

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2634  TTACCTGGGCCAGCTAACCAGGCAAGTTGCCATGGTTCAGACTCTGCAGTCACTGAGAGATGAGAAACTGCTGC  2707

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2708  AGACTATGAGCGACCTTGCACCCAGCAACCTCCCCGCTCAACAGGAAGTCCTCAGGACGCTGGCCCTGCTGCTC  2781

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2782  ACCAGGGATGACAATGAGGTCAGCGAAGCTGTGACACTCTACTTGGCAGCAGCCTCCAAAAATGAGCACTTCAG  2855

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2856  AGAAAAGGCCTTGCTCTATTATTGCGAAGCACTAACGAAGGCCAATCTCCAGCTACAGAAGGCAGCATGTCTGG  2929

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2930  CCCTAAAGAGCCTGGAGGCCACCGAAAGCATTAAAATGCTAGTGACGTTGTGTCAGTCTGACACTGAAGAAATC  3003

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3004  AGAACCGTGGCCTCGGAAACCCTCCTCTCTCTTGGAGAAGACGGGCGACTGGCGTACGAGCAATTAGACAAATT  3077

Query 1774  ----------------------------------------------------------  1773
                                                                      
Sbjct 3078  CCCTCGAGATTGTGTTAAAGTGGGAGGTCGTCATGGAACCGAAGTTGCCACAGCCTTT  3135

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