Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_07481
Subject:
XM_011515012.1
Aligned Length:
3306
Identities:
1772
Gaps:
1533

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGGTGTTACCTTCGCGATTACACTGGATCAGAAACAGGCCATGGAGGGACAGGATCCGGAGGCGCCAGCTCAA  74

Query    1  ----------------------------ATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA  46
                                        ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   75  CCGACTACCGACCAGACTCCCGGAAATCATGTTGGTAGGATCCCAGTCTTTTTCGCCTGGAGGGCCCAATGGGA  148

Query   47  TCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAA  120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  TCATTAGAAGCCAGTCCTTTGCGGGTTTCAGCGGCCTCCAGGAAAGGCGATCCAGGTGTAACTCCTTCATTGAA  222

Query  121  AATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCC  194
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  AATTCCTCCGCTCTCAAGAAGCCTCAGGCCAAACTGAAGAAAATGCACAATTTAGGCCACAAAAACAACAATCC  296

Query  195  CCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGG  268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCCCAAAGAGCCTCAGCCTAAAAGGGTGGAAGAAGTCTACAGGGCCTTGAAAAATGGACTTGATGAATATCTGG  370

Query  269  AGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTA  342
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGGTTCACCAGACGGAGCTGGACAAGTTGACAGCTCAGTTAAAAGATATGAAAAGAAACTCTCGCCTGGGTGTA  444

Query  343  CTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGT  416
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGTATGACCTAGACAAGCAAATTAAAACAATTGAAAGATACATGAGACGCCTGGAGTTTCATATAAGTAAGGT  518

Query  417  AGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  490
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  AGATGAACTCTATGAAGCTTATTGTATCCAGCGACGCCTCCAGGATGGTGCCAGCAAAATGAAGCAAGCCTTCG  592

Query  491  CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAG  564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CAACATCCCCTGCCAGCAAAGCTGCCCGGGAGAGTCTGACAGAGATCAATCGGAGCTTCAAGGAGTACACAGAG  666

Query  565  AATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  638
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  AATATGTGCACCATTGAAGTGGAGCTAGAGAATCTGCTGGGAGAATTCTCCATCAAGATGAAAGGTCTGGCTGG  740

Query  639  CTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAG  712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  CTTTGCACGCCTCTGTCCTGGAGATCAATATGAAATTTTCATGAAGTATGGCCGGCAGCGGTGGAAACTGAAAG  814

Query  713  GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTC  786
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  GCAAAATAGAAGTAAATGGCAAGCAGAGCTGGGATGGAGAAGAAACAGTTTTTCTGCCCCTGATAGTTGGGTTC  888

Query  787  ATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAA  860
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  ATCTCCATCAAGGTCACGGAGCTCAAAGGGCTAGCAACTCACATCCTGGTAGGTAGCGTGACCTGTGAGACCAA  962

Query  861  AGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  934
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AGAGCTGTTTGCAGCCCGACCTCAGGTAGTGGCTGTCGACATCAATGACCTTGGTACCATCAAACTGAACCTGG  1036

Query  935  AAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTT  1008
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  AAATCACCTGGTATCCATTTGACGTGGAGGACATGACCGCATCCTCAGGCGCTGGGAACAAGGCAGCAGCCCTT  1110

Query 1009  CAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTT------  1076
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1111  CAGAGGAGAATGTCCATGTACAGCCAGGGTACCCCGGAAACGCCCACCTTCAAAGACCACTCCTTCTTTAGGTG  1184

Query 1077  --------------------------------------------------------------------------  1076
                                                                                      
Sbjct 1185  GCTGCATCCTTCCCCAGACAAGCCCAGGCGGCTGTCTGTCTTGAGTGCCTTGCAAGACACTTTCTTTGCCAAGC  1258

Query 1077  ----------------------------------------------------------------------TTCA  1080
                                                                                  ||||
Sbjct 1259  TGCACCGCAGCCGCTCCTTCAGTGACCTGCCCTCCCTCAGGCCGAGTCCCAAGGCCGTGCTAGAGCTCTATTCA  1332

Query 1081  AATCTACCTGATGACATCTTTGAAAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGA  1154
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  AATCTACCTGATGACATCTTTGAAAATGGAAAGGCAGCCGAGGAGAAAATGCCACTGTCGCTCAGCTTCAGTGA  1406

Query 1155  CCTGCCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTA  1228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  CCTGCCCAACGGGGACTGCGCCCTCACCTCCCACTCAACAGGCTCCCCTTCCAACTCAACAAATCCAGAAATTA  1480

Query 1229  CCATCACCCCTGCGGAGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCA  1302
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1481  CCATCACCCCTGCGGAGTTTAACCTCAGCAGCTTGGCCTCCCAGAATGAGGGTATGGATGACACCAGCTCAGCA  1554

Query 1303  TCTTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAG  1376
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1555  TCTTCCAGGAACTCCCTGGGAGAAGGCCAAGAGCCAAAGTCACACCTGAAGGAGGAAGACCCAGAGGAGCCCAG  1628

Query 1377  AAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTG  1450
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1629  AAAACCTGCCTCGGCCCCATCTGAGGCTTGCCGCCGACAGTCCTCAGGTGCTGGGGCTGAGCACCTGTTCCTTG  1702

Query 1451  AGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACT  1524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1703  AGAATGATGTTGCAGAAGCACTTCTGCAAGAGTCTGAGGAGGCCTCTGAGCTCAAGCCTGTGGAACTGGACACT  1776

Query 1525  TCGGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCT  1598
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777  TCGGAAGGAAACATCACAAAGCAGCTGGTCAAGAGGCTCACATCTGCAGAGGTGCCAATGGCCACAGACAGGCT  1850

Query 1599  GCTCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTT  1672
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1851  GCTCTCTGAGGGTTCTGTTGGTGGAGAATCTGAAGGCTGCAGATCCTTTCTAGATGGAAGCTTAGAGGATGCTT  1924

Query 1673  TTAATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTC  1746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1925  TTAATGGGCTTTTACTTGCATTAGAACCACATAAAGAGCAGTATAAAGAGTTTCAGGATCTGAACCAAGAAGTC  1998

Query 1747  ATGAATTTGGANGATATTCTAAAA---AAG--------------------------------------------  1773
            |||||||||||.||||||||||||   |||                                            
Sbjct 1999  ATGAATTTGGATGATATTCTAAAATGCAAGCCAGCAGTAAGCCGCAGCAGGTCTTCCAGTTTAAGTCTCACAGT  2072

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2073  TGAAAGTGCTTTAGAAAGCTTTGATTTCCTGAACACCTCTGATTTTGACGAGGAGGAGGATGGTGATGAGGTTT  2146

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2147  GTAATGTTGGCGGAGGTGCTGACTCAGTATTTTCAGACACTGAGACTGAGAAACACAGTTACAGGTCGGTTCAC  2220

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2221  CCAGAAGCCAGGGGGCATCTCAGTGAAGCGCTCACTGAAGACACAGGAGTTGGGACCAGTGTGGCAGGAAGTCC  2294

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2295  TCTCCCACTGACCACAGGCAACGAGAGCCTGGACATCACCATCGTCAGGCACCTCCAGTACTGCACCCAACTCG  2368

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2369  TGCAGCAAATTGTTTTCTCAAGCAAAACCCCATTTGTGGCAAGAAGTCTCTTAGAGAAGCTTTCTAGGCAGATC  2442

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2443  CAAGTGATGGAGAAACTCGCAGCTGTCAGTGATGAGAACATAGGAAATATCAGTTCTGTTGTGGAAGCCATACC  2516

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2517  AGAATTTCACAAAAAGCTGTCTTTGCTGTCATTCTGGACCAAGTGCTGCAGCCCTGTTGGTGTCTACCACAGCC  2590

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2591  CAGCGGACAGAGTGATGAAGCAGCTGGAGGCCAGCTTTGCCAGAACTGTCAACAAAGAATATCCAGGACTTGCA  2664

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2665  GACCCAGTGTTTCGAACCCTGGTGTCCCAAATTCTGGACCGGGCTGAGCCTCTGCTTTCCTCCAGCCTGTCCTC  2738

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2739  GGAAGTCGTCACTGTTTTCCAGTATTACAGTTACTTCACCAGCCACGGCGTCAGTGACCTGGAGAGTTACCTGA  2812

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2813  GCCAGCTGGCCAGGCAAGTTTCCATGGTTCAGACTCTGCAATCACTAAGAGATGAAAAACTGCTACAAACCATG  2886

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2887  AGTGACCTTGCTCCCAGCAACCTCCTGGCCCAGCAGGAAGTACTCAGGACTCTGGCTCTGCTATTAACCAGAGA  2960

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 2961  GGACAACGAAGTTAGTGAGGCTGTGACGCTTTACTTGGCAGCAGCCTCCAAAAATCAGCATTTCAGGGAAAAGG  3034

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3035  CCTTGCTCTATTACTGTGAAGCACTAACAAAGACAAACCTCCAGCTCCAGAAAGCAGCTTGCCTGGCTCTGAAA  3108

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3109  ATCCTTGAGGCTACTGAAAGCATTAAAATGCTGGTGACATTGTGTCAATCTGATACTGAAGAAATCAGAAATGT  3182

Query 1774  --------------------------------------------------------------------------  1773
                                                                                      
Sbjct 3183  GGCCTCAGAAACCCTCTTGTCTCTGGGAGAAGATGGGCGGCTGGCATATGAACAATTGGACAAATTTCCTCGAG  3256

Query 1774  --------------------------------------------------  1773
                                                              
Sbjct 3257  ACTGTGTTAAAGTCGGAGGTCGTCATGGAACTGAAGTTGCCACAGCCTTT  3306

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