Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08581
Subject:
NM_001369761.1
Aligned Length:
1513
Identities:
251
Gaps:
1244

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
            |||||||||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTG-------  141
            |||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||       
Sbjct   75  GGACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATTTTC  148

Query  142  --------------------------------------------------------------------------  141
                                                                                      
Sbjct  149  GGTCTGTCACCCAGGCTAAAGTGCAGTGGTGTCACCTCGGCTCACTGCAACCTCCACTTCCCAGGTTCAAGCAA  222

Query  142  -------------------------------------GATACCTCTTCCAAATGCATGATGAAGATGTTCTCAT  178
                                                 ||||.|||||||||||||||||||||||..||||..|
Sbjct  223  TTCTCCTGCCTCAGCCTTCCAAGTAGCTGGGACTACAGATATCTCTTCCAAATGCATGATGAAGACATTCTTCT  296

Query  179  CAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGAT  252
            |||||||.||||||||||||||||.|.|||||||||||||||||||||.|||.|||||||||||||||||||||
Sbjct  297  CAACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTGCAAAGACAAGCAAGTCATCACATTGGAGAT  370

Query  253  ACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCA  326
            ..||||||||||.||||                                                         
Sbjct  371  TTTTGCTTCCAGAAAAT---------------------------------------------------------  387

Query  327  TGAAGCACTCATGACAAAAATCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACA  400
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  401  AACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGG  474
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  475  AAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAG  548
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  549  GCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAG  622
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  623  TACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAA  696
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  697  CATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATA  770
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  771  CCTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCAGTCACA  844
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  845  ATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTT  918
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  919  TTTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATG  992
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query  993  TGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAAT  1066
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query 1067  GTAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAA  1140
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query 1141  CCTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATAC  1214
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query 1215  TGGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTA  1288
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query 1289  GACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAA  1362
                                                                                      
Sbjct  388  --------------------------------------------------------------------------  387

Query 1363  CGTCATCATAGACTTCATACTGGAAAGAAATCT  1395
                                             
Sbjct  388  ---------------------------------  387

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