Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08581
Subject:
NM_006969.5
Aligned Length:
2165
Identities:
1235
Gaps:
781

Alignment

Query    1  ATGGCTCTTCCTCAGGGTCTACTGACATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74
            |||||||||||||||||||||.|||||||||||||.||||||||||||||||||||||||||||||||||||||
Sbjct    1  ATGGCTCTTCCTCAGGGTCTATTGACATTCAGGGACGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCT  74

Query   75  GGACCCTGCTCAGAGGACTCTATACAGAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCT  148
            |||||||||||||||||||||.|||||.||.||||||||||||||||||||||||||||||||||||||||.||
Sbjct   75  GGACCCTGCTCAGAGGACTCTTTACAGGGATGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATATCT  148

Query  149  CTTCCAAATGCATGATGAAGATGTTCTCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTG  222
            |||||||||||||||||||||..||||..||||||||.||||||||||||||||.|.|||||||||||||||||
Sbjct  149  CTTCCAAATGCATGATGAAGACATTCTTCTCAACAGGGCAAGGCAATACAGAAGCGTTCCACACAGGGACATTG  222

Query  223  CAAATACATGCAAGTCATCACATTGGAGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTT  296
            ||||.|||.|||||||||||||||||||||..||||||||||.|||||||||||||.|||||||.|||...|||
Sbjct  223  CAAAGACAAGCAAGTCATCACATTGGAGATTTTTGCTTCCAGAAAATTGAGAAAGACATTCATGGCTTCCAGTT  296

Query  297  TCAGTGGCAAGAAAATGAAACAAATGGCCATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACA  369
            |||||||.|||||.||||||||||||.|||||.|||||.|||||||.||||||||.|||||| || ||||||||
Sbjct  297  TCAGTGGAAAGAAGATGAAACAAATGACCATGCAGCACCCATGACAGAAATCAAAGAGTTGACTG-GTAGTACA  369

Query  370  GAGCGACATGATCAAAGGCATGCTGGAAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCT  443
            |..|.|||||||||||||||||||||||||||.|.|||||||.||.|||||||||.||||||||||||||||||
Sbjct  370  GGCCAACATGATCAAAGGCATGCTGGAAACAAGCATATTAAAGATCAGCTTGGATTAAGCTTTCATTCGCATCT  443

Query  444  GCCTGAAGTGCACATATTTCACCCCGAAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCT  517
            |||||||.|||||||||||||.||.||||||||||||||||||||||||||||||.||||||||.||||||.||
Sbjct  444  GCCTGAACTGCACATATTTCAGCCTGAAGGGAAAATTGGTAATCAAGTTGAGAAGTCTATCAACAATGCTTCCT  517

Query  518  CAGTTTCAGCATCCCAACGAATTTCCTGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTC  591
            ||||||||.||||||||.||||||..||||||||.|||||.|.||||||||||||||||.|.|||||||.||||
Sbjct  518  CAGTTTCAACATCCCAAAGAATTTGTTGTAGGCCCAAAACCCATATTTCTAATAAGTATGGAAATAATTCCCTC  591

Query  592  CAGTCTTCATTACTCACACAAAAACGGGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAA  665
            ||.||||||||||||||||||||||||.|.|||||||..||||||||||||||||||.|||.||||||||||||
Sbjct  592  CATTCTTCATTACTCACACAAAAACGGAATGTACACATGAGAGAAAAATCTTTCCAATGTATTGAGAGTGGCAA  665

Query  666  AGCCTTTAATGGTAGCTCACTCTTAAAAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATG  739
            |.||||||||.||||||||||.|||||||||||||||||||.|||.||||.|||.|||||.|.|||||||||||
Sbjct  666  ATCCTTTAATTGTAGCTCACTTTTAAAAAAACATCAGATAACCCACTTAGAAGAGAAACAATGTAAATGTGATG  739

Query  740  TATGCGGCAAGGACTTTCATCAGAAGCGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTAC  810
            |||..|||||||..|||.|||||||||||||||||||||||||   |||||.|||||.||.||||||.||||||
Sbjct  740  TATATGGCAAGGTATTTAATCAGAAGCGATACCTTGCATGCCATCGTAGATCTCACATTGATGAGAAACCTTAC  813

Query  811  AAGTGTAATGAGTGTGGCAAGACATTCAGTCACAATTCAGCCCTGTTAGTTCACAAGGC---------------  869
            ||||||||||||||||||||||..||..||||||||.||.||||.||..||||||||||               
Sbjct  814  AAGTGTAATGAGTGTGGCAAGATCTTTGGTCACAATACATCCCTCTTCCTTCACAAGGCGCTTCATACTGCAGA  887

Query  870  --------------------------------------------------------------------------  869
                                                                                      
Sbjct  888  CAAACCTTATGAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAACACATAAGATAATTT  961

Query  870  --------------------------------------------------------------------------  869
                                                                                      
Sbjct  962  ATACTGGAGGGAAACCATACAAATGTAAGGTTTGTGACAAAGCTTTCACATGTAATTCATACCTAGCAAAACAT  1035

Query  870  -----AATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAATCAAACCT  938
                 ||||||.|||||||||||||||||||||||||||||||||||||||||||||||||.||..||||.|||
Sbjct 1036  ACTATAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGACTGTCAACCCT  1109

Query  939  TGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCA  1012
            ||||||.||||.|||..||||||||||||||||||||||..||||||||||||||||.||||||||||||||||
Sbjct 1110  TGCACGCCATCGTAGGCTTCATACTGGAGAGAAACCTTATGAATGTGAAGAATGTGAAAAAGTTTTCAGTCGCA  1183

Query 1013  AATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1086
            |||||||.|||||||||||||.|||.|||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1184  AATCACATCTTGAAAGACATAAGAGGATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCT  1257

Query 1087  TT--CAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAG  1158
            ||  ||.|  |.|||||.||||||||.||||||.|.|||||||||||||||||||.|||||||||||||||||.
Sbjct 1258  TTTGCATA--TAATTCATACCTGGCAAAACATAGTATAATTCACACTGGAGAGAAGCCTTACAAGTGTAATGAA  1329

Query 1159  TGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTA----ATGCATAAGGTCATTCATACTGGAGAGAAACGTT  1228
            |||||||||...||...||||.|.|||.||||||.|    || ||||  |.| |||||||||.||||||||..|
Sbjct 1330  TGTGGCAAGGTTTTTAATCAACAATCAACTCTTGCACGCCAT-CATA--GAC-TTCATACTGCAGAGAAACCAT  1399

Query 1229  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCA----CAAATCAAACCTTG----------------------  1276
            ||||.|||.|.|||||||.|||.||||    |||    |||||||.||||||                      
Sbjct 1400  ACAAATGTGAAGAATGTGACAAAGTTT----TCAGGTGCAAATCACACCTTGAAAGACATAGGAGGATTCATAC  1469

Query 1277  -----------------------------------------------------CATG---------TCATCGTA  1288
                                                                 ||||         .||||..|
Sbjct 1470  TGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCCGGAGTGATTCATGCCTTACAGAACATCAGA  1543

Query 1289  GACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAA  1362
            ||.|||||||||||||||||||.||||.||||||||||||||||||||||||||.|..||||.|||||||||.|
Sbjct 1544  GAGTTCATACTGGAGAGAAACCATACATGTGTAATGAATGTGGCAAGGTTTTTAGTACAAAAGCAAACCTTGCA  1617

Query 1363  CGTCATCATAGACTTCATACTGGAAAGAAATCT-----------------------------------------  1395
            .|||||||||.|||||||||||.|.|||||.|.                                         
Sbjct 1618  TGTCATCATAAACTTCATACTGCAGAGAAACCGTACAAATGTGAAGAATGTGAGAAAGTTTTCAGTCGCAAATC  1691

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1692  ACACATGGAAAGACATAGGAGGATTCATACTGGAGAGAAACCGTACAAATGTAAGGTTTGTGACAAGGCTTTCC  1765

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1766  GGAGGGATTCACACCTGGCACAACATCAGAGAGTTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGC  1839

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1840  AAGACCTTCCGTCAGACATCATCGCTTATAATCCATCGTAGGCTTCATACTGGAGAGAAACCTTACAAGTGTAA  1913

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1914  TGAGTGTGGCAAGACCTTCAGTCAGATGTCATCCCTCGTATACCATCATAGGCTTCATAGTGGAGAGAAACCTT  1987

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1988  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCAACAAGCACACCTTGCACAGCATCAGAGAGTTCATACTGGA  2061

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2062  GAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTCAGTCAGATGTCAAACCTTGTATACCATCATAGACT  2135

Query 1396  -------------------  1395
                               
Sbjct 2136  TCATAGTGGAGAGAAACCT  2154

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