Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08581
Subject:
XM_024451507.1
Aligned Length:
2715
Identities:
1209
Gaps:
1326

Alignment

Query    1  ------------------------------------------------ATGGCTCTTCCTCAGGGTCTACTGAC  26
                                                            |||||||||||||||||.|...||||
Sbjct    1  ATGTTACGTGAGGAAGCAGCTCAGAAGAGGAAAGGAAAGGAGTCAGGCATGGCTCTTCCTCAGGGACGCTTGAC  74

Query   27  ATTCAGGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACA  100
            .||||||||||||||.|||||||||||...||..||||||||||.||||.|||||||.||||||.||.|.||||
Sbjct   75  TTTCAGGGATGTGGCTATAGAATTCTCATTGGCAGAGTGGAAATTCCTGAACCCTGCACAGAGGGCTTTGTACA  148

Query  101  GAGACGTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTC  174
            |.||.||||||.|||||||.||.||||||||||...|..||||||.||||||||||..||||||||||..|.||
Sbjct  149  GGGAAGTGATGTTGGAGAACTACAGGAACCTGGAGGCTGTGGATATCTCTTCCAAACACATGATGAAGGAGGTC  222

Query  175  TCATCAACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGG  248
            |..||||||||.||||||||||.|||||||.|||||||||||||||||||||.||||..||||.||||||||||
Sbjct  223  TTGTCAACAGGGCAAGGCAATAGAGAAGTGATCCACACAGGGACATTGCAAAGACATCAAAGTTATCACATTGG  296

Query  249  AGATACTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATG  322
            |||...||||||||||||||||||||||||.||||||.||.|||.|||||||||.||||||.||||||.|||||
Sbjct  297  AGACTTTTGCTTCCAGGAAATTGAGAAAGAAATTCATAACATTGAGTTTCAGTGTCAAGAAGATGAAAGAAATG  370

Query  323  GCCATGAAGCACTCATGACAAAAATCAAAAAGTTGA-TGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGG  395
            ||||||||||||.||.|||||||||.|||||||||| || ||||.|||||.|.|||||||||.|||||||||||
Sbjct  371  GCCATGAAGCACCCACGACAAAAATAAAAAAGTTGACTG-GTAGCACAGACCAACATGATCACAGGCATGCTGG  443

Query  396  AAACAAACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCG  469
            ||||||.|||||||||.||.|||||||||||||||||.||||.||||||||||||.|.|||||||||||...|.
Sbjct  444  AAACAAGCCTATTAAAGATCAGCTTGGATCAAGCTTTTATTCACATCTGCCTGAACTCCACATATTTCAGATCA  517

Query  470  AAGGGAAAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCC  543
            ||||..||||||.|||||||.||||||||.|||.||..|||||||.||||||||||.||||||||.||||||||
Sbjct  518  AAGGTGAAATTGCTAATCAACTTGAGAAGTCTACCAGTGATGCTTCCTCAGTTTCAACATCCCAAAGAATTTCC  591

Query  544  TGTAGGCCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACG  617
            ||||||||..|||..|.||||||||||||.|||.||||||||..|||..|.||||||||||||.|||||||||.
Sbjct  592  TGTAGGCCCCAAATCCATATTTCTAATAACTATGGGAATAATCCCCTGAATTCTTCATTACTCCCACAAAAACA  665

Query  618  GGAAGTACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAA  691
            |||||||||||..||||||||||||||||.|.||||||||||||||||||||||||||.|||||||||||||||
Sbjct  666  GGAAGTACACATGAGAGAAAAATCTTTCCCATGTAATGAGAGTGGCAAAGCCTTTAATTGTAGCTCACTCTTAA  739

Query  692  AAAAACATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAG  765
            ..|||||.||||||..||||||||||||||||||.|||||||||||||||||.||||||..||||.||||.|||
Sbjct  740  GGAAACACCAGATACCCCATTTAGGAGACAAACAATATAAATGTGATGTATGTGGCAAGCTCTTTAATCACAAG  813

Query  766  CGATACCTTGCATGCCA---TAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATT  836
            |.|||||||||||||||   |||||||||||||||.|||||.||||||||||||||.||||||||.|||.|.||
Sbjct  814  CAATACCTTGCATGCCATCGTAGATGTCACACTGGAGAGAAACCTTACAAGTGTAAAGAGTGTGGAAAGTCCTT  887

Query  837  CA------------------------------------------------------------------------  838
            ||                                                                        
Sbjct  888  CAGTTACAAGTCATCCCTTACATGCCATCATAGACTTCATACTGGAGTAAAACCTTACAAGTGTAATGAGTGTG  961

Query  839  ------------GTCACAATTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGT  900
                        ||||.|||||||||||..||.||||.||||||||||||||||||||||||||||||||||||
Sbjct  962  GCAAGGTCTTTCGTCAAAATTCAGCCCTTGTAATTCATAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGT  1035

Query  901  AATGAATGTGGCAAGGTTTTTAATCAA-----------------------------------------------  927
            ||||||||||||||||.||||||||||                                               
Sbjct 1036  AATGAATGTGGCAAGGCTTTTAATCAACAATCACACCTTTCACGCCATCAAAGACTTCATACTGGAGTGAAACC  1109

Query  928  --------------------------------------------------------------------------  927
                                                                                      
Sbjct 1110  TTACAAATGTAAGATTTGTGAGAAGGCTTTTGCGTGTCATTCCTATCTGGCAAACCATACTAGAATTCATAGTG  1183

Query  928  -----------------------------------------------CAATCAAACCTTGCACGTCATCATAGA  954
                                                           |||||||.|||||||||||||||||.|
Sbjct 1184  GAGAGAAAACATACAAGTGTAATGAGTGTGGTAAGGCTTTTAATCATCAATCAAGCCTTGCACGTCATCATATA  1257

Query  955  GTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCGCAAATCACACCTTGAAAG  1028
            .||||||||||||||||||||||||||||||||||||||||||||||||||||||..||||||..||||||.||
Sbjct 1258  CTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAGTTTTCAGTCAGAAATCAACCCTTGAGAG  1331

Query 1029  ACATAGGAGAATTCACACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGGCTTTCAGACGTG--ATTC  1100
            |||||.|||||||||.|||||||||||||||||||||||||||||||||||.|..||||||  |||||  ||||
Sbjct 1332  ACATAAGAGAATTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGATACAGCTTTC--ACGTGTAATTC  1403

Query 1101  ACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAGACCTTC-  1173
            |||.|||||||.|||||....|||||||||||||||||||.||||||||||||||||||||.||||||||||| 
Sbjct 1404  ACAGCTGGCACGACATAGAAGAATTCACACTGGAGAGAAAACTTACAAGTGTAATGAGTGTCGCAAGACCTTCA  1477

Query 1174  -----------------------------------------GTTCAAAA---TT--------------------  1183
                                                     |.|.||||   ||                    
Sbjct 1478  GCCGCAGGTCATCCCTTCTATGCCATCGTAGACTTCATAGTGGTGAAAAACCTTACAAGTGTAATCAGTGTGGC  1551

Query 1184  -------------------CATCTCTTGTA--------------------------------------------  1194
                               ||||.||||||                                            
Sbjct 1552  AATACCTTCCGTCACCGGGCATCCCTTGTATACCATCGTAGACTTCACACTCTAGAGAAATCTTACAAATGTAC  1625

Query 1195  -------------------ATGCATAA---GGTC------------------ATTCATACTGGAGAGAAACGTT  1228
                               ||||.|||   .|||                  |||||.||||.|.||||||.||
Sbjct 1626  GGTTTGTAACAAGGTTTTCATGCGTAATTCAGTCCTGGCTGTACATACTAGAATTCACACTGCAAAGAAACCTT  1699

Query 1229  ACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAGACTTCATACTGGA  1302
            |||||||||||||||||||.||.|.|||||||||..|||||.|.|||.||.|||||||||||||||||||||||
Sbjct 1700  ACAAGTGTAATGAATGTGGGAAAGCTTTTAATCAACAATCACATCTTTCACGTCATCGTAGACTTCATACTGGA  1773

Query 1303  GAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAACGTCATCAT---AG  1373
            ||||||||||||||.|||.|.|.|||||.|||.||||||..||..||||||...|||||  |||| |||   ||
Sbjct 1774  GAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTTGGTCAGAAATCAGCTCTTGA--GTCA-CATAAGAG  1844

Query 1374  ACTTCATACTGGAAAGAAATCT----------------------------------------------------  1395
            |.|||||||||||.|||||.|.                                                    
Sbjct 1845  AATTCATACTGGAGAGAAACCATACAGATGTCAGGTTTGTGACACAGCTTTCACGTGGAATTCACAGCTGGCAC  1918

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1919  GACATACAAGAATTCACACTGGAGAAAAAACTTACAAGTGTAATGAGTGTGGGAAGACCTTCAGTTACAAGTCA  1992

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1993  TCACTTGTATGGCATCGTAGACTTCATGGTGGAGAGAAATCTTACAAATGTAAGGTTTGTGACAAGGCTTTCGT  2066

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2067  GTGTCGTTCCTATGTGGCAAAACATACTAGAATTCACAGTGGAATGAAACCTTACAAGTGTAATGAGTGCAGCA  2140

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2141  AGACCTTCAGTAACAGGTCATCCCTTGTATGCCATCGTAGAATTCATAGTGGTGAGAAACCTTACAAGTGTAGT  2214

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2215  GAGTGCAGCAAGACGTTCAGTCAGAAGGCAACCCTTCTATGCCATCGTAGACTTCATAGTGGTGAGAAACCTTA  2288

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2289  CAAGTGTAACGACTGTGGCAATACCTTCCGTCACTGGTCATCCCTTGTATACCATCGTAGACTTCATACTGGAG  2362

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2363  AGAAATCTTACAAATGTACGGTTTGTGACAAGGCTTTCGTGCGTAATTCATACCTGGCAAGACATATTAGAATT  2436

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2437  CACACTGCAGAGAAACCTTACAAGTGTAATGAATGTGGAAAGGCTTTTAATGAACAATCACACCTTTCACGTCA  2510

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2511  TCATAGAATTCATACTGGAGAGAAACCTTACAAATGTGAAGCATGTGACAAAGTTTTCAGTCGCAAATCACACC  2584

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2585  TTAAAAGACATAGGATAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAGTGTGGCAAAGCCTTTAGTGAC  2658

Query 1396  ---------------------------------------------------  1395
                                                               
Sbjct 2659  CGGTCAACACTTATTCACCATCAGGCAATTCATGGTATAGGGAAATTTGAT  2709

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