Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08581
Subject:
XR_001753718.2
Aligned Length:
2995
Identities:
1391
Gaps:
1600

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCAGACCAGGAAGCGGATCCCGTGGAGTGAAGGTCGCACCGCGGCGGATTGACTTCTAAAGACTTGGTACGTGA  74

Query    1  -------------------------------------------ATGGCTCTTCCTCAGGGTCTACTGACATTCA  31
                                                       ||||||||||.||||||||||||||||||||
Sbjct   75  GGAAAAAACACGGAAGAGGAAGAGGAAAGCAAAGGAGTCAGGGATGGCTCTTCTTCAGGGTCTACTGACATTCA  148

Query   32  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGATGTGGCCATAGAATTCTCTCAGGAGGAGTGGAAATGCCTGGACCCTGCTCAGAGGACTCTATACAGAGAC  222

Query  106  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  179
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGATGCTGGAGAATTATAGGAACCTGGTCTCCCTGGATACCTCTTCCAAATGCATGATGAAGATGTTCTCATC  296

Query  180  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  253
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  AACAGGACAAGGCAATACAGAAGTGGTCCACACAGGGACATTGCAAATACATGCAAGTCATCACATTGGAGATA  370

Query  254  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  CTTGCTTCCAGGAAATTGAGAAAGATATTCATGACTTTGTGTTTCAGTGGCAAGAAAATGAAACAAATGGCCAT  444

Query  328  GAAGCACTCATGACAAAAATCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA  401
            |||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  GAAGCACTCATGACAAAAACCAAAAAGTTGATGAGTAGTACAGAGCGACATGATCAAAGGCATGCTGGAAACAA  518

Query  402  ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  ACCTATTAAAAATGAGCTTGGATCAAGCTTTCATTCGCATCTGCCTGAAGTGCACATATTTCACCCCGAAGGGA  592

Query  476  AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG  549
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  AAATTGGTAATCAAGTTGAGAAGGCTATCAACGATGCTTTCTCAGTTTCAGCATCCCAACGAATTTCCTGTAGG  666

Query  550  CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT  623
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CCAAAAACTCGTATTTCTAATAAGTATAGGAATAATTTCCTCCAGTCTTCATTACTCACACAAAAACGGGAAGT  740

Query  624  ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC  697
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ACACACAAGAGAAAAATCTTTCCAACGTAATGAGAGTGGCAAAGCCTTTAATGGTAGCTCACTCTTAAAAAAAC  814

Query  698  ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC  771
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATCAGATAATCCATTTAGGAGACAAACAGTATAAATGTGATGTATGCGGCAAGGACTTTCATCAGAAGCGATAC  888

Query  772  CTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACAAGTGTAATGAGTGTGGCAAGACATTCAGTCACAA  845
            ||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct  889  CTTGCATGCCATAGATGTCACACTGGTGAGAATCCTTACACGTGTAATGAGTGTGGCAAGACATTCAGTCACAA  962

Query  846  TTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTT  919
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TTCAGCCCTGTTAGTTCACAAGGCAATTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTT  1036

Query  920  TTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGT  993
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TTAATCAACAATCAAACCTTGCACGTCATCATAGAGTTCATACTGGAGAGAAACCTTACAAATGTGAAGAATGT  1110

Query  994  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATG  1067
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  GACAAAGTTTTCAGTCGCAAATCACACCTTGAAAGACATAGGAGAATTCACACTGGAGAGAAACCATACAAATG  1184

Query 1068  TAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAAC  1141
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  TAAGGTTTGTGACAAGGCTTTCAGACGTGATTCACACCTGGCACAACATACTGTAATTCACACTGGAGAGAAAC  1258

Query 1142  CTTACAAGTGTAATGAGTGTGGCAAGACCTTCGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACT  1215
            |||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  CTTACAAGTGTAATGAGTGTGGCAAGACCTTTGTTCAAAATTCATCTCTTGTAATGCATAAGGTCATTCATACT  1332

Query 1216  GGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAG  1289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333  GGAGAGAAACGTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCACAAATCAAACCTTGCATGTCATCGTAG  1406

Query 1290  ACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAAC  1363
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407  ACTTCATACTGGAGAGAAACCTTACAAGTGTAATGAATGTGGCAAGGTTTTTAATCGAAAATCAAACCTTGAAC  1480

Query 1364  GTCATCATAGACTTCATACTGGAAAGAAATCT------------------------------------------  1395
            ||||||||||||||||||||||||||||||||                                          
Sbjct 1481  GTCATCATAGACTTCATACTGGAAAGAAATCTTAGAAGTGTAAATTTGCAAGGTTTTTAGGCAACAGTCAAACC  1554

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1555  TTGCATGTCATCATAGACTTTATACTGGAGAGAAACCTTACAAATGTGAAGAATGTGACAAAAGTTTTCAATTT  1628

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1629  CAAATCACTCCTTGAAATACATAGGAGAGTTCATACTGGAGAGAAACCATACAAATGTAAGGTTTGTGACAAGG  1702

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1703  ATTTCGGGTGTGATTCACACCTGGCCCAACATACTGGAATTCACACTGGAAAGGAACTGTACAAGTGTAATGAG  1776

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1777  TGTGGCAGAGCCTTTGGTGGTCAGTCAACACTTACTCACCATCAAGCAATCCATGGTATAGGGAAACTTGACTA  1850

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1851  ATGTAATGATTGTCACAAAGTCTTCAGTAATATTACAGCCATTGCAAAACATTGGAGAATCCATAATGAAGGAG  1924

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1925  GTCTTACAAGTGTAATAAATGTGGCAAGTTTTTCAGACATCATTCATAACTTGCAGTTCATTGGCGATCTTATA  1998

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 1999  CAGGAGAGAAATCTTACAAATGTGATGATTGTGGCAAGGTCTTCAGTCAAGCTTCATCTTTTGCAAAACGGGAG  2072

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2073  AATTCATACAGGAGAGAAACCTCACAAGTGTGATGATTGTGAGCAAAGCCTTTACTTCACGTTCACACCACATT  2146

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2147  AGATATCAGAGGATCCATACTGGACAGAAATCTTACAAACGTCCTATGTGTGGCAAGGTCTTCAGTCCGAGGTT  2220

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2221  ACTCCTTGCAGAATATCATAACGTTCATTTTTGAGGATTGATTTCCAAAGACTCATGCTATGTAAGGAAGCCAC  2294

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2295  CAAGAAGGGCAAAGAAAAGGAGCCAGGGACGGCTCTTCCTCAGGGACACTAGACTTTCAGGGATGTGGCTATAG  2368

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2369  ATTTCTCTTTGGAGGAGTGGAAATGCCTGAACCCTGCACAGAGGGCTTTATACAGGGAAGTGATGTTGGAGAAC  2442

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2443  TACAGGAACCTGGAGTTTGTGGGGACATACGTGACATTTGGTGAGATGTGGGACAGGAGGACTCCTTCAGGAGA  2516

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2517  CTGATCCCCTGTCCTGATCTCCATGAGGAGCTCCAGCTACGACCTCAGGTCCTCAGACCAACCAGCCCAAGGAA  2590

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2591  CGTCTCACCAATTTCAAATTGGACAGGAATGTCAGGCCTCTGAGCCCAAGACTGCAGGTATACATCCAGATGGC  2664

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2665  CTGAGGCAACCGAAAAGTACAAAAGAAGTGAAACAGCCAGCCCCTGTCTTAACTGATTGACCAACCTTATGACT  2738

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2739  TTCCATTATGACTTGTTCCTGCCCTGCCCCAACTGATCGATCGACCTTGAGAAATTCTTCTGGACAATGAGTCT  2812

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2813  TATGATCTCCCCACAATGCACCTTGTGACGCTCTCCTCTGCTGACAATAGATAACCACCTTTAACTGTAACTAT  2886

Query 1396  --------------------------------------------------------------------------  1395
                                                                                      
Sbjct 2887  CCACTGCTTACCCCAGGCCTATAAAACTGCCCCACCCCATCTCCTTTTGCTGACTTCTTTTTCAGACCCAGTCT  2960

Query 1396  -----------------------------------  1395
                                               
Sbjct 2961  GCCTGCACCCAGGTGAAATAAACAGCCTTGTTGCT  2995

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