Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_08799
Subject:
XM_011247294.2
Aligned Length:
1779
Identities:
1265
Gaps:
426

Alignment

Query    1  ATGAGGGTGCTTTGTGCCTTCCCTGAAGCCATGCCCTCCAGCAACTCCCGCCCCCCCGCGTGCCTAGCCCCGGG  74
            |||||||||||.|||||.|||||||||||||||.|||||||||.|||||||||||||.||||||||||||.||.
Sbjct    1  ATGAGGGTGCTCTGTGCTTTCCCTGAAGCCATGGCCTCCAGCAGCTCCCGCCCCCCCTCGTGCCTAGCCCTGGT  74

Query   75  GGCTCTCTACTTGGCTCTGTTGCTCCATCTCTCCCTTTCCTCCCAGGCTGGAGACAGGAGACCCTTGCCTGTAG  148
            ||||||||.|||||||||||||||||||||||||||.||||.|||.||||||.||||||||||.||||||||||
Sbjct   75  GGCTCTCTTCTTGGCTCTGTTGCTCCATCTCTCCCTCTCCTTCCACGCTGGAAACAGGAGACCTTTGCCTGTAG  148

Query  149  ACAGAGCTGCAGGTTTGAAGGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTC  222
            ||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  ACAGAGCTACAGGTTTGAAGGAAAAGACCCTGATTCTACTTGATGTGAGCACCAAGAACCCAGTCAGGACAGTC  222

Query  223  AATGAGAACTTCCTCTCTCTGCAGCTGGATCCGTCCATCATTCATGATGGCTGGCTCGATTTCCTAAGCTCCAA  296
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||.||||||||||
Sbjct  223  AATGAGAACTTCCTCTCTCTGCAGCTGGATCCCTCCATCATTCATGATGGCTGGCTCGATTTCTTAAGCTCCAA  296

Query  297  GCGCTTGGTGACCCTGGCCCGGGGACTTTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACCGACTTCCTGC  370
            |||..||||||||.|||||||||||||.|||||||||||||||||||||||||||||||||||.||.|||||||
Sbjct  297  GCGTCTGGTGACCTTGGCCCGGGGACTCTCGCCCGCCTTTCTGCGCTTCGGGGGCAAAAGGACGGATTTCCTGC  370

Query  371  AGTTCCAGAACCTGAGGAACCCGGCGAAAAGCCGCGGGGGCCCGGGCCCGGATTACTATCTCAAAAACTATGAG  444
            ||||||||||||||||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGTTCCAGAACCTGAGAAATCCGGCGAAAAGCCGCGGGGGCCCGGGCCCGGATTACTATCTCAAAAACTATGAG  444

Query  445  GATGACATTGTTCGAAGTGATGTTGCCTTAGATAAACAGAAAGGCTGCAAGATTGCCCAGCACCCTGATGTTAT  518
            |||||||||||.||.||||||||||||||.||.||.|||||||||||.|||||||||||||||||||||||.||
Sbjct  445  GATGACATTGTCCGGAGTGATGTTGCCTTGGACAAGCAGAAAGGCTGTAAGATTGCCCAGCACCCTGATGTCAT  518

Query  519  GCTGGAGCTCCAAAGGGAGAAGGCAGCTCAGATGCATCTGGTTCTTCTAAAGGAGCAATTCTCCAATACTTACA  592
            ||||||||||||.||.|||||||||.|.||||||||||||||||||||.||||||||||.||||||||||||||
Sbjct  519  GCTGGAGCTCCAGAGAGAGAAGGCATCGCAGATGCATCTGGTTCTTCTGAAGGAGCAATACTCCAATACTTACA  592

Query  593  GTAATCTCATATTAACAGCCAGGTCTCTAGACAAACTTTATAACTTTGCTGATTGCTCTGGACTCCACCTGATA  666
            ||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GTAACCTCATATTAACAGCCAGGTCTCTAGACAAACTTTATAACTTTGCTGATTGCTCTGGACTCCACCTGATA  666

Query  667  TTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGTCTGTTGAAGTA  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||
Sbjct  667  TTTGCTCTAAATGCACTGCGTCGTAATCCCAATAACTCCTGGAACAGTTCTAGTGCCCTGAGCCTGTTGAAGTA  740

Query  741  CAGCGCCAGCAAAAAGTACAACATTTCTTGGGAACTGGGTAATGAGCCAAATAACTATCGGACCATGCATGGCC  814
            |||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||.|||||||
Sbjct  741  CAGTGCCAGCAAAAAGTACAACATTTCTTGGGAACTGGGTAATGAGCCAAATAACTATCGGAGCATCCATGGCC  814

Query  815  GGGCAGTAAATGGCAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGTTGCAGCCCATCCGGATTTAT  888
            |||||||||||||.|||||||||||||||||||||||||||||||||||||||.|.||.|||||||||.||||.
Sbjct  815  GGGCAGTAAATGGTAGCCAGTTGGGAAAGGATTACATCCAGCTGAAGAGCCTGCTCCAACCCATCCGGGTTTAC  888

Query  889  TCCAGAGCCAGCTTATATGGCCCTAATATTGGGCGGCCGAGGAAGAATGTCATCGCCCTCCTAGATGGATTCAT  962
            ||||||||||||.|.||.|||||.||.||.||.|||||.||||||||.|||||.||.|||||||||||||||||
Sbjct  889  TCCAGAGCCAGCCTGTACGGCCCCAACATCGGACGGCCCAGGAAGAACGTCATTGCTCTCCTAGATGGATTCAT  962

Query  963  GAAGGTGGCAGGAAGTACAGTAGATGCAGTTACCTGGCAACATTGCTACATTGATGGCCGGGTGGTCAAGGTGA  1036
            |||||||||||||||.|||||.|||||.||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  GAAGGTGGCAGGAAGCACAGTGGATGCGGTTACCTGGCAACATTGCTACATTGATGGCCGGGTGGTCAAGGTGA  1036

Query 1037  TGGACTTCCTGAAAACTCGCCTGTTAGACACACTCTCTGACCAGATTAGGAAAATTCAGAAAGTGGTTAATACA  1110
            |||||||||||||||||||.||||||||.||||||||||||||||||||||||||||||||||||||.||.|||
Sbjct 1037  TGGACTTCCTGAAAACTCGTCTGTTAGATACACTCTCTGACCAGATTAGGAAAATTCAGAAAGTGGTCAACACA  1110

Query 1111  TACACTCCAGGAAAGAAGATTTGGCTTGAAGGTGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTATCCGA  1184
            ||||||||||||||||||||||||||.|||||.|||||||||||||||||||||||||||||||||||.||.||
Sbjct 1111  TACACTCCAGGAAAGAAGATTTGGCTGGAAGGCGTGGTGACCACCTCAGCTGGAGGCACAAACAATCTGTCGGA  1184

Query 1185  TTCCTATGCTGCAGGATTCTTATGGTTGAACACTTTAGGAATGCTGGCCAATCAGGGCATTGATGTCGTGATAC  1258
            ||||||.||||||||||||||||||.|.|||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1185  TTCCTACGCTGCAGGATTCTTATGGCTAAACACTTTAGGAATGTTGGCCAATCAGGGCATTGATGTCGTGATAC  1258

Query 1259  GGCACTCATTTTTTGACCATGGATACAATCACCTCGTGGACCAGAATTTTAACCCATTACCAGACTACTGGCTC  1332
            |.||.||||||||.|||||.||||||||.||.||.||||||||||||||||||||||||||  |.|.||||   
Sbjct 1259  GACATTCATTTTTCGACCACGGATACAACCATCTGGTGGACCAGAATTTTAACCCATTACC--AATGCTGG---  1327

Query 1333  TCTCTCCTCTACAAGCGCCTGATCGG---CCCCAAAGTCTTGGCTGTGCATGTGGCTGGGCTCCAGCGGAAGCC  1403
                               .||| ||   |||      ||.|||...|||  |||||                 
Sbjct 1328  -------------------AGAT-GGTTACCC------CTAGGCACAGCA--TGGCT-----------------  1356

Query 1404  ACGGCCTGGCCGAGTGATCCGGGACAAACTAAGGATTTATGCTCACTGCACAAACCACCACAACCACAACTACG  1477
                                                                                      
Sbjct 1357  --------------------------------------------------------------------------  1356

Query 1478  TTCGTGGGTCCATTACACTTTTTATCATCAACTTGCATCGATCAAGAAAGAAAATCAAGCTGACTGGGACTCTC  1551
                                                                                      
Sbjct 1357  --------------------------------------------------------------------------  1356

Query 1552  AGAGACAAGCTGGTTCACCAGTACCTGCTGCAGCCCTATGGGCAGGAGGGCCTAAAGTCCAAGTCAGTGCAACT  1625
                                                                                      
Sbjct 1357  --------------------------------------------------------------------------  1356

Query 1626  GAATGGCCAGCCCTTAGTGATGGTGGACGACGGGACCCTCCCAGAATTGAAGCCCCGCCCCCTTCGGGCCGGCC  1699
                                                                                      
Sbjct 1357  --------------------------------------------------------------------------  1356

Query 1700  GGACATTGGTCATCCCTCCAGTCACCATGGGCTTTTTTGTGGTCAAGAATGTCAATGCTTTGGCCTGCCGCTAC  1773
                                                                                      
Sbjct 1357  --------------------------------------------------------------------------  1356

Query 1774  CGA  1776
               
Sbjct 1357  ---  1356

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