Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09022
Subject:
NM_028787.4
Aligned Length:
1572
Identities:
1391
Gaps:
3

Alignment

Query    1  ATGGTGCCGCCACGACGCCATCGCGGGGCAGGAAGGCCAGGGGTGCTGAGTTCTTCACCTCCTTTTAGACTGAG  74
            ||||||||||||||||.||||||.|||||||||||||||||.|.|||||||||||.||||||.|||.|||||.|
Sbjct    1  ATGGTGCCGCCACGACTCCATCGAGGGGCAGGAAGGCCAGGTGGGCTGAGTTCTTTACCTCCATTTGGACTGGG  74

Query   75  ATCTGCCAAGTTTTCCGGCATTGCTCTTGAGGATCTCAGAAGGGCTCTTAAGACAAGACTGCAAATGGTGTGTG  148
            .||||||...|||.|.||||||||..||||||||||||||...||.|||...|||||||||||||||||.|.||
Sbjct   75  CTCTGCCCGCTTTGCAGGCATTGCATTTGAGGATCTCAGAGAAGCCCTTGCAACAAGACTGCAAATGGTTTATG  148

Query  149  TATTTGTCATGAACCGAATGAATTCCCAGAACAGTGGTTTCACTCAGCGCAGGCGAATGGCTCTTGGGATTGTT  222
            |.|||.||||||||||..||||||||||||.|||||||||||.||||||||||||||||||.||.|||||.||.
Sbjct  149  TGTTTATCATGAACCGTGTGAATTCCCAGAGCAGTGGTTTCAGTCAGCGCAGGCGAATGGCCCTGGGGATAGTG  222

Query  223  ATTCTTCTGCTTGTTGATGTGATATGGGTTGCTTCCTCTGAACTTACTTCGTATGTTTTTACCCAGTACAACAA  296
            |||||.|||||.|||||||||||||||||.||.|||||.|||||.||.||||||||.||.||.|||||||||||
Sbjct  223  ATTCTCCTGCTGGTTGATGTGATATGGGTGGCATCCTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAA  296

Query  297  ACCATTCTTCAGCACCTTTGCAAAAACATCTATGTTTGTTTTGTACCTTTTGGGCTTTATTATTTGGAAGCCAT  370
            .||||||||||||||||||||.||||||||.|||||||||.||||||||||||||||.||||||||||||||.|
Sbjct  297  GCCATTCTTCAGCACCTTTGCGAAAACATCCATGTTTGTTCTGTACCTTTTGGGCTTCATTATTTGGAAGCCTT  370

Query  371  GGAGACAACAGTGTACAAGAGGACTTCGCGGAAAGCATGCTGCTTTTTTTGCAGATGCTGAAGGTTACTTTGCT  444
            ||||.||||||||||||||||||.||.|.||.||||.|||||||||||||||||||||||||||||||||||||
Sbjct  371  GGAGGCAACAGTGTACAAGAGGATTTAGAGGGAAGCCTGCTGCTTTTTTTGCAGATGCTGAAGGTTACTTTGCT  444

Query  445  GCTTGCACAACAGATACAACTATGAATAGTTCTTTGAGTGAACCTCTGTATGTGCCTGTGAAATTCCATGATCT  518
            ||.||||||||||||||||..||||.|||||||||||||||||||||.|||||.||||||||.||.||||||||
Sbjct  445  GCGTGCACAACAGATACAAGCATGAGTAGTTCTTTGAGTGAACCTCTTTATGTTCCTGTGAAGTTTCATGATCT  518

Query  519  TCCAAGTGAAAAACCTGAGAGCACAAACATTGATACTGAAAAAACCCCCAAAAAGTCTCGTGTGAGGTTCAGTA  592
            .||||||||.||.|..||||||||||||||||..||.|||||.||.|||||.|||||.|||||.||||||||.|
Sbjct  519  CCCAAGTGAGAAGCTCGAGAGCACAAACATTGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAAGGTTCAGCA  592

Query  593  ATATCATGGAGATTCGACAGCTTCCGTCAAGTCATGCATTGGAAGCAAAGTTGTCTCGCATGTCATATC---CT  663
            ||||||||||||||||.|||||.||.||.||.|||||.||.||.||.|||.|.|||||.|||||.||||   ||
Sbjct  593  ATATCATGGAGATTCGCCAGCTCCCATCGAGCCATGCGTTAGAGGCCAAGCTCTCTCGGATGTCTTATCCCACT  666

Query  664  GTGAAAGAACAAGAATCCATACTGAAAACTGTGGGGAAACTTACTGCAACTCAAGTAGCGAAAATTAGCTTTTT  737
            ||||||||.|||||||||||||||||.|||||.||||||.|.||||||||.||||||||.||||||||||||||
Sbjct  667  GTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGACTGCAACCCAAGTAGCAAAAATTAGCTTTTT  740

Query  738  TTTTTGCTTTGTGTGGTTTTTGGCAAATTTGTCATATCAAGAAGCACTTTCAGACACACAAGTTGCTATAGTTA  811
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.|
Sbjct  741  TTTTTGCTTTGTGTGGTTTTTGGCAAATTTGTCATACCAAGAAGCACTTTCAGACACACAGGTTGCCATAGTGA  814

Query  812  ATATTTTATCTTCAACTTCCGGACTTTTTACCTTAATCCTTGCTGCAGTATTTCCAAGTAACAGTGGAGATAGA  885
            |||||||.|||||||||||.|||||||||||.|||||||||||.||.||||||||.||||||||.|||||.||.
Sbjct  815  ATATTTTGTCTTCAACTTCTGGACTTTTTACTTTAATCCTTGCAGCTGTATTTCCGAGTAACAGCGGAGACAGG  888

Query  886  TTTACCCTTTCTAAACTATTAGCTGTAATTTTAAGCATTGGAGGCGTTGTACTGGTAAACCTGGCAGGGTCTGA  959
            ||||||||.|||||||||||||||||||||||||||||||||||.||.||.|||||.||||||.|.||||||||
Sbjct  889  TTTACCCTCTCTAAACTATTAGCTGTAATTTTAAGCATTGGAGGTGTGGTGCTGGTGAACCTGTCTGGGTCTGA  962

Query  960  AAAACCTGCTGGAAGAGACACAGTAGGTTCCATTTGGTCTCTTGCTGGAGCCATGCTCTATGCTGTCTATATTG  1033
            |||..|||||||||||||||||.||||||||||||||||.|||||||||||.|||.|||||||||||||.||||
Sbjct  963  AAAGTCTGCTGGAAGAGACACAATAGGTTCCATTTGGTCCCTTGCTGGAGCTATGTTCTATGCTGTCTACATTG  1036

Query 1034  TTATGATTAAGAGAAAAGTAGATAGAGAAGACAAGTTGGATATTCCAATGTTCTTTGGTTTTGTAGGTTTGTTT  1107
            |.|||||.||||||||.|||||.||||||||.||.|||||||||||||||||||||||||||||||||.|||||
Sbjct 1037  TGATGATCAAGAGAAAGGTAGACAGAGAAGATAAATTGGATATTCCAATGTTCTTTGGTTTTGTAGGTCTGTTT  1110

Query 1108  AATCTGCTGCTCTTATGGCCAGGTTTCTTTTTACTTCATTATACTGGATTTGAGGACTTCGAGTTTCCCAATAA  1181
            ||||||||||||.||||||||||.|||||.|||||.|||||||||||.|||||||||||.|||||||||||.||
Sbjct 1111  AATCTGCTGCTCCTATGGCCAGGGTTCTTCTTACTGCATTATACTGGCTTTGAGGACTTTGAGTTTCCCAACAA  1184

Query 1182  AGTAGTATTAATGTGCATTATCATTAATGGCCTTATTGGAACAGTACTCTCAGAGTTCCTGTGGTTGTGGGGCT  1255
            |||.|||.|..||||.||.||.||.||.|||||.||.||||||||.||.||.|||||.||||||||.|||||||
Sbjct 1185  AGTGGTACTGTTGTGTATCATTATCAACGGCCTCATCGGAACAGTTCTGTCCGAGTTTCTGTGGTTATGGGGCT  1258

Query 1256  GCTTTCTTACCTCATCATTGATAGGCACACTTGCACTAAGCCTTACAATACCTCTGTCCATAATAGCTGACATG  1329
            |||||||||||||.||.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||
Sbjct 1259  GCTTTCTTACCTCGTCGTTGATAGGCACACTTGCACTAAGCCTTACGATACCTCTCTCCATCATAGCCGACATG  1332

Query 1330  TGTATGCAAAAGGTGCAGTTTTCTTGGTTATTTTTTGCAGGAGCTATCCCTGTATTTTTTTCATTTTTTATTGT  1403
            ||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1333  TGCATGCAAAAGGTGCAGTTTTCTTGGTTATTTTTTGCAGGCGCTATCCCTGTATTTTTTTCATTTTTTATTGT  1406

Query 1404  AACTCTCCTATGCCATTATAATAATTGGGATCCTGTGATGGTGGGAATCAGAAGAATATTTGCTTTTATATGCA  1477
            .||||||||.||||||||||||||||||||||||||||||||.|||.||||||||.|.|||||.||||||||||
Sbjct 1407  TACTCTCCTGTGCCATTATAATAATTGGGATCCTGTGATGGTAGGAGTCAGAAGAGTTTTTGCCTTTATATGCA  1480

Query 1478  GAAAACATCGAATTCAGAGAGTTCCAGAAGACAGCGAACAGTGTGAGAGTCTCATTTCTATGCACAGTGTTTCT  1551
            ||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||||||.||||||
Sbjct 1481  GAAAACATCGAATTCAGAGAGTTCCAGAAGACAGTGAACAGTGCGAGAGCCTCATTTCTATGCACAGCGTTTCT  1554

Query 1552  CAGGAGGATGGCGCTAGT  1569
            ||.||||||||.||||.|
Sbjct 1555  CAAGAGGATGGAGCTACT  1572

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