Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09022
Subject:
XM_006529912.3
Aligned Length:
1572
Identities:
1276
Gaps:
141

Alignment

Query    1  ATGGTGCCGCCACGACGCCATCGCGGGGCAGGAAGGCCAGGGGTGCTGAGTTCTTCACCTCCTTTTAGACTGAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ATCTGCCAAGTTTTCCGGCATTGCTCTTGAGGATCTCAGAAGGGCTCTTAAGACAAGACTGCAAATGGTGTGTG  148
                                                                            |||||.|.||
Sbjct    1  ----------------------------------------------------------------ATGGTTTATG  10

Query  149  TATTTGTCATGAACCGAATGAATTCCCAGAACAGTGGTTTCACTCAGCGCAGGCGAATGGCTCTTGGGATTGTT  222
            |.|||.||||||||||..||||||||||||.|||||||||||.||||||||||||||||||.||.|||||.||.
Sbjct   11  TGTTTATCATGAACCGTGTGAATTCCCAGAGCAGTGGTTTCAGTCAGCGCAGGCGAATGGCCCTGGGGATAGTG  84

Query  223  ATTCTTCTGCTTGTTGATGTGATATGGGTTGCTTCCTCTGAACTTACTTCGTATGTTTTTACCCAGTACAACAA  296
            |||||.|||||.|||||||||||||||||.||.|||||.|||||.||.||||||||.||.||.|||||||||||
Sbjct   85  ATTCTCCTGCTGGTTGATGTGATATGGGTGGCATCCTCAGAACTCACCTCGTATGTCTTCACGCAGTACAACAA  158

Query  297  ACCATTCTTCAGCACCTTTGCAAAAACATCTATGTTTGTTTTGTACCTTTTGGGCTTTATTATTTGGAAGCCAT  370
            .||||||||||||||||||||.||||||||.|||||||||.||||||||||||||||.||||||||||||||.|
Sbjct  159  GCCATTCTTCAGCACCTTTGCGAAAACATCCATGTTTGTTCTGTACCTTTTGGGCTTCATTATTTGGAAGCCTT  232

Query  371  GGAGACAACAGTGTACAAGAGGACTTCGCGGAAAGCATGCTGCTTTTTTTGCAGATGCTGAAGGTTACTTTGCT  444
            ||||.||||||||||||||||||.||.|.||.||||.|||||||||||||||||||||||||||||||||||||
Sbjct  233  GGAGGCAACAGTGTACAAGAGGATTTAGAGGGAAGCCTGCTGCTTTTTTTGCAGATGCTGAAGGTTACTTTGCT  306

Query  445  GCTTGCACAACAGATACAACTATGAATAGTTCTTTGAGTGAACCTCTGTATGTGCCTGTGAAATTCCATGATCT  518
            ||.||||||||||||||||..||||.|||||||||||||||||||||.|||||.||||||||.||.||||||||
Sbjct  307  GCGTGCACAACAGATACAAGCATGAGTAGTTCTTTGAGTGAACCTCTTTATGTTCCTGTGAAGTTTCATGATCT  380

Query  519  TCCAAGTGAAAAACCTGAGAGCACAAACATTGATACTGAAAAAACCCCCAAAAAGTCTCGTGTGAGGTTCAGTA  592
            .||||||||.||.|..||||||||||||||||..||.|||||.||.|||||.|||||.|||||.||||||||.|
Sbjct  381  CCCAAGTGAGAAGCTCGAGAGCACAAACATTGGGACCGAAAAGACTCCCAAGAAGTCCCGTGTAAGGTTCAGCA  454

Query  593  ATATCATGGAGATTCGACAGCTTCCGTCAAGTCATGCATTGGAAGCAAAGTTGTCTCGCATGTCATATC---CT  663
            ||||||||||||||||.|||||.||.||.||.|||||.||.||.||.|||.|.|||||.|||||.||||   ||
Sbjct  455  ATATCATGGAGATTCGCCAGCTCCCATCGAGCCATGCGTTAGAGGCCAAGCTCTCTCGGATGTCTTATCCCACT  528

Query  664  GTGAAAGAACAAGAATCCATACTGAAAACTGTGGGGAAACTTACTGCAACTCAAGTAGCGAAAATTAGCTTTTT  737
            ||||||||.|||||||||||||||||.|||||.||||||.|.||||||||.||||||||.||||||||||||||
Sbjct  529  GTGAAAGACCAAGAATCCATACTGAAGACTGTAGGGAAATTGACTGCAACCCAAGTAGCAAAAATTAGCTTTTT  602

Query  738  TTTTTGCTTTGTGTGGTTTTTGGCAAATTTGTCATATCAAGAAGCACTTTCAGACACACAAGTTGCTATAGTTA  811
            ||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||.|||||.|||||.|
Sbjct  603  TTTTTGCTTTGTGTGGTTTTTGGCAAATTTGTCATACCAAGAAGCACTTTCAGACACACAGGTTGCCATAGTGA  676

Query  812  ATATTTTATCTTCAACTTCCGGACTTTTTACCTTAATCCTTGCTGCAGTATTTCCAAGTAACAGTGGAGATAGA  885
            |||||||.|||||||||||.|||||||||||.|||||||||||.||.||||||||.||||||||.|||||.||.
Sbjct  677  ATATTTTGTCTTCAACTTCTGGACTTTTTACTTTAATCCTTGCAGCTGTATTTCCGAGTAACAGCGGAGACAGG  750

Query  886  TTTACCCTTTCTAAACTATTAGCTGTAATTTTAAGCATTGGAGGCGTTGTACTGGTAAACCTGGCAGGGTCTGA  959
            ||||||||.|||||||||||||||||||||||||||||||||||.||.||.|||||.||||||.|.||||||||
Sbjct  751  TTTACCCTCTCTAAACTATTAGCTGTAATTTTAAGCATTGGAGGTGTGGTGCTGGTGAACCTGTCTGGGTCTGA  824

Query  960  AAAACCTGCTGGAAGAGACACAGTAGGTTCCATTTGGTCTCTTGCTGGAGCCATGCTCTATGCTGTCTATATTG  1033
            |||..|||||||||||||||||.||||||||||||||||.|||||||||||.|||.|||||||||||||.||||
Sbjct  825  AAAGTCTGCTGGAAGAGACACAATAGGTTCCATTTGGTCCCTTGCTGGAGCTATGTTCTATGCTGTCTACATTG  898

Query 1034  TTATGATTAAGAGAAAAGTAGATAGAGAAGACAAGTTGGATATTCCAATGTTCTTTGGTTTTGTAGGTTTGTTT  1107
            |.|||||.||||||||.|||||.||||||||.||.|||||||||||||||||||||||||||||||||.|||||
Sbjct  899  TGATGATCAAGAGAAAGGTAGACAGAGAAGATAAATTGGATATTCCAATGTTCTTTGGTTTTGTAGGTCTGTTT  972

Query 1108  AATCTGCTGCTCTTATGGCCAGGTTTCTTTTTACTTCATTATACTGGATTTGAGGACTTCGAGTTTCCCAATAA  1181
            ||||||||||||.||||||||||.|||||.|||||.|||||||||||.|||||||||||.|||||||||||.||
Sbjct  973  AATCTGCTGCTCCTATGGCCAGGGTTCTTCTTACTGCATTATACTGGCTTTGAGGACTTTGAGTTTCCCAACAA  1046

Query 1182  AGTAGTATTAATGTGCATTATCATTAATGGCCTTATTGGAACAGTACTCTCAGAGTTCCTGTGGTTGTGGGGCT  1255
            |||.|||.|..||||.||.||.||.||.|||||.||.||||||||.||.||.|||||.||||||||.|||||||
Sbjct 1047  AGTGGTACTGTTGTGTATCATTATCAACGGCCTCATCGGAACAGTTCTGTCCGAGTTTCTGTGGTTATGGGGCT  1120

Query 1256  GCTTTCTTACCTCATCATTGATAGGCACACTTGCACTAAGCCTTACAATACCTCTGTCCATAATAGCTGACATG  1329
            |||||||||||||.||.|||||||||||||||||||||||||||||.||||||||.|||||.|||||.||||||
Sbjct 1121  GCTTTCTTACCTCGTCGTTGATAGGCACACTTGCACTAAGCCTTACGATACCTCTCTCCATCATAGCCGACATG  1194

Query 1330  TGTATGCAAAAGGTGCAGTTTTCTTGGTTATTTTTTGCAGGAGCTATCCCTGTATTTTTTTCATTTTTTATTGT  1403
            ||.||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||
Sbjct 1195  TGCATGCAAAAGGTGCAGTTTTCTTGGTTATTTTTTGCAGGCGCTATCCCTGTATTTTTTTCATTTTTTATTGT  1268

Query 1404  AACTCTCCTATGCCATTATAATAATTGGGATCCTGTGATGGTGGGAATCAGAAGAATATTTGCTTTTATATGCA  1477
            .||||||||.||||||||||||||||||||||||||||||||.|||.||||||||.|.|||||.||||||||||
Sbjct 1269  TACTCTCCTGTGCCATTATAATAATTGGGATCCTGTGATGGTAGGAGTCAGAAGAGTTTTTGCCTTTATATGCA  1342

Query 1478  GAAAACATCGAATTCAGAGAGTTCCAGAAGACAGCGAACAGTGTGAGAGTCTCATTTCTATGCACAGTGTTTCT  1551
            ||||||||||||||||||||||||||||||||||.||||||||.|||||.|||||||||||||||||.||||||
Sbjct 1343  GAAAACATCGAATTCAGAGAGTTCCAGAAGACAGTGAACAGTGCGAGAGCCTCATTTCTATGCACAGCGTTTCT  1416

Query 1552  CAGGAGGATGGCGCTAGT  1569
            ||.||||||||.||||.|
Sbjct 1417  CAAGAGGATGGAGCTACT  1434

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