Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09529
Subject:
XR_001738632.2
Aligned Length:
4002
Identities:
551
Gaps:
3432

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTCCCGGGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGC  74

Query    1  ---------------------------------ATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT  41
                                             |||||||||||||||||||||||||||||||||||||||||
Sbjct   75  TGCGGCCGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCT  148

Query   42  GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC  115
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  GGGCGTGTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCC  222

Query  116  TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG  189
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  TTCCGAGTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCG  296

Query  190  CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG  263
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CTGACCTACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGG  370

Query  264  TAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA  337
            .|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  GAACGTGAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGCCCTGCAGAAGTGGA  444

Query  338  TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG  411
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCATAGACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGCTCCAGTGTCTGTGG  518

Query  412  AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAA----------  475
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
Sbjct  519  AAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGTGCAAGGTCTCGCTC  592

Query  476  ---CAAGAATAATCACAACCT-TAATGACCACCAATGATTTTACAATTCTTCTAC---------GTTT------  530
               |        |||||..|| .|.||     ||.|||   |||.| ||||| ||         ||||      
Sbjct  593  TCTC--------TCACAGGCTGGAGTG-----CAGTGA---TACGA-TCTTC-ACTCACTGCGGGTTTCCAAGT  648

Query  531  ---TGTGATCATG-----------------CTGGC-----TTTAAATA-TATGGGTA----------ACAGTGA  568
               ||.||..|.|                 |||||     |||||.|| |||...||          ||    |
Sbjct  649  AGCTGGGAGTACGAGCACACACCACCACACCTGGCTAATTTTTAATTATTATTATTATTATTTTGAGAC----A  718

Query  569  CAGTACTTCGCTACCGGAAGACCGCTATAA---AGGCTGAA---------------------------------  606
            ||||  .|||||            ||.|.|   ||||||.|                                 
Sbjct  719  CAGT--CTCGCT------------CTGTCACCCAGGCTGGAGTGCAGTGGTGCAATCTCGGCTCACTGCAACCT  778

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct  779  CTGCCTCCAAGGTTCAAGCGATTCTCCTGCCTCAGCTTCCTGAGTAGCTGGGATTACAGGCACACGCCACCATG  852

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct  853  CCTGGCTAATTTTTGTATTTTTAGTAGAGACGAGTTTTCACCATGTTGGCCAGGCTGGTTTTGAACTCCTGACC  926

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct  927  TCAAGTGATCCACCCGCCTTGGCCTCCCAAAGTGCTAGGATTACAGGCATGAGCCACCGCGCCCAGCCAATTTT  1000

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1001  TTGTAGAGAGGGGTCTCACTATGTTGCCAAGGCTGGTCTCAAACTACTGGGCTCAAGTGTTCATCTCACCTCAG  1074

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1075  CCTCCCAAAGTATTGGGATTACAGGTGTGAGCCACTGCACCTGGCCCTGTATGTTTTCTTTGGAGAAATGTCTG  1148

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1149  TTCACATGGTTTGCCCATTTTTTAATTGGGTCATTTGAGTTTCTTACATATTCTGGTCATTAACCCTTGTCAGA  1222

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1223  TGTGTGGTTATTAACAGCCTTTTAAAAAGTTTGTCTGAGAGTCCTTTGTTGGCCGCCTTCCTAACTGAAGTCTT  1296

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1297  CTGTCTACTTATATGATTGAATTCTTTTATTTAAATGATGATTTAATCAACAACTATTTATGTGGTGTCTGTGT  1370

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1371  GTAAAGTCTTGGTTTATCAAATGTGTCAACAAAACATTTTATAGGATTTGGCCTCTGCCCTTCAGGGGCTTGCA  1444

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1445  GTTTAGTTGGAAGGTAGACCAAAAAACTTCTATGTCAATATGTGCTAAATGCAGAATGTGTTAGCAGAGAGTTT  1518

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1519  TGACAGGCTGGTTTTGGGCTAGGAAAGGCATGCCTTGAGCTGCAGGCAGTGGTCTTCTCTAACTCCCAAGTCAC  1592

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1593  GCCACTCCCTGCTCTTGTGTGTCGGTTTAAACTGTTACTCCAATTTCCTAAATGTTTACTAAGTAAAGGGCTAT  1666

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1667  GGCACACAAATAAACTAAACAAAATAGTTCTAGTTAGACCCTTGGAAAAATCTTCCCCTTTTCTGGGCCTCAGT  1740

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1741  CTGTTTATCTATAAAATGCAAGGATAGAAACCAGTGATTCGAAAACATTTATTGTTTGTTTTTTGAGACAGAGT  1814

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1815  TTCGCTCTTTCGCTTAGGCTGGAGTGTAGTGGCATGATCTCGGCTCACTGCAACCTCAGCCTTCCGGTTTCAAG  1888

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1889  CGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTATTACAGGTGCCCGCCACCACACCCAGCTAATTTTTG  1962

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1963  TATTTTTAATAGAGACAGGGTCTCACCATGTTGGTCAGGCTGGTCTCGAACTTCTGACCTCATGATCCACCCGC  2036

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2037  CTCAGCCTCCCGAAATGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGCCAAAACATTGTTTTTAATTAGTGG  2110

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2111  GAGCCTTTCTTTAAATAAAACTACCCAGATGCTCAATTTGTAAATGAGAGTTGCTTTTGGAGGGTTGGGGGTTG  2184

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2185  CAGGTTAGCACAGAGACAGTGGAAGGGAGCTCAGTCTCTCCGGCCTTCCGCAGGCAGCGCTCGAGTACCTTCTA  2258

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2259  GGTACCTTCCCTCATGAGCAGTTTCAAAACCATTGGGCCATTGGGGTAGGATGCATGGCTGTTTTTTGTTTTGT  2332

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2333  TTTGTTTTGTTTTTGAGACGGAGTCTGGCTCTGTCACCCAGGCTGGAGTCAATTGGCGCAATCTCAGCTCACTG  2406

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2407  CAACCTTTGCCTCCCAGGTTCAAGCGATTATCTTGCCGCAGCCTCCTGAGTAGCTGGGATTACAGGCGCCCGCC  2480

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2481  ACTACACCTGGCTAATTTTTGTATTTTCAGTAGAGACAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGA  2554

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2555  ACTCCTGACCTCAGGTGATCCGGCATGGCTAGTTTTTATGTAATTATGAAATACAGCACTATTTGGTTTTCTGT  2628

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2629  ACTACCAAACTCTGTCAAGAATAGTTAATATATGTTGTTAAAAAAAGAATAAAAATAATTTAAAAATAATGGTT  2702

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2703  AATATATATTGGGATATTAAAAGGGAAAGACATTATTAGCTAAGCCCCAAAATGTCCGAGAGGCAAGTTACTTA  2776

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2777  TTGCTGCAAGTTTTCTTTTACAGCAAGAATAATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTAC  2850

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2851  GTTTTGTGATCATGCTGGCTTTAAATATATGGGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAG  2924

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2925  GCTGAATGATGGATACATTATTCCTTCACACAGTGGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTT  2998

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 2999  GCTAAATTAAGGTCTTTTATAAATTTAGTAAATCAGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGA  3072

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3073  AAGAAAGAGCCACTTAAATTCTTGTTTAAAAATACCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGT  3146

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3147  AGTGCTCAGACATCTGCAGTGTTGAGGCCAGTCACTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTT  3220

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3221  TGAGCCTTACTCTTAAGTTCTCTATGAAGAACTACATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAAT  3294

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3295  CCTCTCCAGGACAAAAATGAACATGAATGGAGTGGCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAAT  3368

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3369  GACTAGGGTTCACTTTCTGGGACTGATGTTTAATTGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAAT  3442

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3443  ACGGTATTATACCCGCATGTGCTCTAGCAAGGATACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACC  3516

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3517  AAAACAGTCCTTCAACTTTGCACTGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCT  3590

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3591  ACTTTCGATGAGGAAATCCCAGTAAGCTTTCTGATTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTA  3664

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3665  TAGAATTACCACTGTTGGAATTTGGTACAAAATATGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGT  3738

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3739  TAGGTAGGTTCTGTCCAGTTCTTAGGGACTTTTTTCACATTATAGCATTTTTACCCTAAACATGATGTTGAGAT  3812

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3813  TATTATATACTGTATTTTCTTCTAAATTAACCCTAATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCAT  3886

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 3887  TGTTTTGTTAGATGCAGTAATGATGTTTACCAGAGATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGA  3960

Query  607  ------  606
                  
Sbjct 3961  ATTCTG  3966

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