Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09529
Subject:
XR_001738633.1
Aligned Length:
1837
Identities:
576
Gaps:
1255

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGGGGAGGGGCGGAGCGAGGCGGGTCCGGGGCCTGGCGGCGCGCGGAGGGGCGGGCCCTGGCCGGGTGGTCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCGGATCCCGGGAAGGCGGAAGGCTTCGGCAGAGCTGCGCCGCCGAGGCTGAGCGGTCCCTTCTCGCTGCGGC  148

Query    1  ---------------------------ATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCTGGGCGT  47
                                       |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  149  CGCCCAGGTGCCCGCGCCCGTGGCGCTATGGAGGCGGCGCTGCTGGGGCTGTGTAACTGGAGCACGCTGGGCGT  222

Query   48  GTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCCTTCCGA  121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GTGCGCCGCGCTGAAGCTGCCGCAGATCTCCGCTGTGCTAGCGGCGCGCAGCGCGCGGGGCCTCAGCCTTCCGA  296

Query  122  GTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCGCTGACC  195
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  GTTTACTTCTGGAGCTGGCAGGATTCCTGGTGTTTCTGCGGTACCAGTGTTACTATGGGTATCCGCCGCTGACC  370

Query  196  TACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGGTAACGT  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct  371  TACCTGGAGTACCCCATCCTCATCGCGCAAGATGTCATCCTCCTGCTCTGTATCTTTCATTTTAACGGGAACGT  444

Query  270  GAAGCAGGCCACTCCTTACATCGCTGTATTGGTGTCTTCTTGGTTCATCCTTGC----CCTG---CAGAAGT--  334
            |||||||||||||||||||||||||||.|                 ||||||.|    .|||   |||||||  
Sbjct  445  GAAGCAGGCCACTCCTTACATCGCTGTGT-----------------ATCCTTTCTGAATCTGAGCCAGAAGTGG  501

Query  335  ------GGATCATA-----GACCTGGCCATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGC  397
                  ||||..||     ||       ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  502  GAACGGGGATGTTATTTGTGA-------ATGAATCTATGTACTTTCATCAGCGCGGCCAGTAAGTTTGCACAGC  568

Query  398  TCCAGTGTCTGTGGAAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGT  471
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  569  TCCAGTGTCTGTGGAAGACGAGAGACTCAGGAACTGTGAGTGCGCTGACTTGGAGCCTCTCTTCCTATACCTGT  642

Query  472  GCAACAAGAATAATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGC  545
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  643  GCAACAAGAATAATCACAACCTTAATGACCACCAATGATTTTACAATTCTTCTACGTTTTGTGATCATGCTGGC  716

Query  546  TTTAAATATATGGGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAA-------------  606
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             
Sbjct  717  TTTAAATATATGGGTAACAGTGACAGTACTTCGCTACCGGAAGACCGCTATAAAGGCTGAATGATGGATACATT  790

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct  791  ATTCCTTCACACAGTGGATTTTGAGTAACTGAACCAAAGGAAAAAGAAGCTCTTTGCTAAATTAAGGTCTTTTA  864

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct  865  TAAATTTAGTAAATCAGTTTATAATCTTTAAAGCCAAAGGTTTTTTTAGACTTGAAAGAAAGAGCCACTTAAAT  938

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct  939  TCTTGTTTAAAAATACCAATTTGCCTCCTCCTTCCTCACTTCGTTAGGTTATGGTAGTGCTCAGACATCTGCAG  1012

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1013  TGTTGAGGCCAGTCACTGTTGGAAGTCATCCAAGAAGCCCATTTTGAGGCCATTTTGAGCCTTACTCTTAAGTT  1086

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1087  CTCTATGAAGAACTACATTGATTTGTTGGCTTTCAGAATCTTTTAGGAAATAAATCCTCTCCAGGACAAAAATG  1160

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1161  AACATGAATGGAGTGGCATTTTGTTCCAAGTCAGAGGTGGGCACCTATAATAAATGACTAGGGTTCACTTTCTG  1234

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1235  GGACTGATGTTTAATTGTAACACAGATACAACAGGGTGGCCTTGTTGTGTATAATACGGTATTATACCCGCATG  1308

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1309  TGCTCTAGCAAGGATACCAAGGCAAGCATACATGTAGCTGGCTTGAGTTTGTACCAAAACAGTCCTTCAACTTT  1382

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1383  GCACTGTGCCTTAAGTAATTACTAACAAAAGGTACTAGGATTAGCTGCAATCTCTACTTTCGATGAGGAAATCC  1456

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1457  CAGTAAGCTTTCTGATTCAAGTACAATGCTGCCATTTTTTAAAGGGCCACAACTATAGAATTACCACTGTTGGA  1530

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1531  ATTTGGTACAAAATATGTTTTGTCTATTGAAAACATACACGGTAAATGGTGTTGTTAGGTAGGTTCTGTCCAGT  1604

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1605  TCTTAGGGACTTTTTTCACATTATAGCATTTTTACCCTAAACATGATGTTGAGATTATTATATACTGTATTTTC  1678

Query  607  --------------------------------------------------------------------------  606
                                                                                      
Sbjct 1679  TTCTAAATTAACCCTAATGTTTAAAAACTCACTTTCCCCCTTTAATTGAAGGCATTGTTTTGTTAGATGCAGTA  1752

Query  607  -------------------------------------------------------------  606
                                                                         
Sbjct 1753  ATGATGTTTACCAGAGATTATTGTTTCCTATGCAAAATAAATTTTCATATTTTGAATTCTG  1813

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