Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09689
Subject:
XM_017008591.2
Aligned Length:
2146
Identities:
1244
Gaps:
746

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGCCCCATAAAGATGGCATTAATGCAGATGCACATGTTGTTTTTCAGATACAGACTTACTCAGACATTGCCAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  CGTCTCCAACTTCTGTAACCTTATAGGGTCTGCAGAGAATGCCATGTTTGAAGATGATGATTGGTGGTCTTGGG  148

Query    1  ---------------------AT-----------GGAACTCGTAACATTCAGGGATGTGGCCATAGAATTCTCC  42
                                 ||           |||||||.|||||||||||||||||||||||||||||||.
Sbjct  149  ATGAAAAGTATTTGTGTTGTGATAACGGTGTTGGGGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCT  222

Query   43  CCTGAAGAGTGGAAATGTCTGGACCCTGCCCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAA  116
            ||.||||||||||||||.||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  CCAGAAGAGTGGAAATGCCTGGACCCTGACCAGCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAA  296

Query  117  CCTGGTCTCCCTGGGTTTTGTGATCTCTAACCCAGACCTGGTCACCTGTCTGGAGCAAATAAAAGAGCCCTGCA  190
            ||||||||||||||||.|||..|||||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct  297  CCTGGTCTCCCTGGGTGTTGCTATCTCTAACCCAGACCTGGTCACCTGTCTGGAGCAAAGAAAAGAGCCCTACA  370

Query  191  ATTTGAAGATACATGAGACAGCAGCCAAACCCCCAGCTATATGTTCTCCTTTCAGCCAAGACCTTTCACCAGTG  264
            ||.|||||||||||.|||..|.|||||.||||||||||||.|||||||.|||||.||||||||.||..||||||
Sbjct  371  ATGTGAAGATACATAAGATCGTAGCCAGACCCCCAGCTATGTGTTCTCATTTCACCCAAGACCATTGGCCAGTG  444

Query  265  CAGGGGATAGAAGATTCATTCCACAAACTTATACTGAAAAGATACGAGAAATGTGGACATGAGAATTTACAATT  338
            |||||.|||||||||||||||||||||||||||||||.||||||.|||||||||||||||||.|||||||||||
Sbjct  445  CAGGGCATAGAAGATTCATTCCACAAACTTATACTGAGAAGATATGAGAAATGTGGACATGATAATTTACAATT  518

Query  339  AAGAAAAGGTTGTAAACGTGTGAATGAGTGTAAGGTGCAGAAAGGAGTTAATAATGGAGTTTACCAGTGCTTGT  412
            |||||||||.||||||.||.||||||||||||||.||||||||||||.|.||||||.|.||.|..|.|||||||
Sbjct  519  AAGAAAAGGCTGTAAAAGTTTGAATGAGTGTAAGTTGCAGAAAGGAGGTTATAATGAATTTAATGAATGCTTGT  592

Query  413  CAACTACCCAGAGCAAAATATTTCAATGTAATACATGTGTTAAAGTTTTTAGTAAATTTTCAAATTCAAACAAA  486
            ||||||||||||||||||||.||||.|||||..||.||||.||||||.||||||||||||||||||||||||||
Sbjct  593  CAACTACCCAGAGCAAAATACTTCAGTGTAAAGCAAGTGTCAAAGTTGTTAGTAAATTTTCAAATTCAAACAAA  666

Query  487  CATAAGATAAGACATACTGGAGAGAAACCCTTTAAATGTACAGAATGTGGCAGATCGTTTTACA---TGTCACA  557
            |.|||||.||||||||||||||||||||.||||||      |||||||||||.|||.|||.|.|   |.|||||
Sbjct  667  CGTAAGACAAGACATACTGGAGAGAAACACTTTAA------AGAATGTGGCAAATCATTTCAGAAGTTTTCACA  734

Query  558  CCTAACTCAACATACAGG-AATTCATGCTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAAGCCTTTAAT  630
            |||||||||||||| ||| ||||||||||||||||||||||||||..||||||.|||||||||||||||||||.
Sbjct  735  CCTAACTCAACATA-AGGTAATTCATGCTGGAGAGAAACCCTACACTTGTGAAGAATGTGGCAAAGCCTTTAAA  807

Query  631  AGGTCCACATCACTTAGTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACATGTGAAGAATGTGGCAA  704
            .||||...|..|.|||.|.|||||||||||||||||||||||||||||||.|..||.|||||||||||||||  
Sbjct  808  TGGTCTTTAATATTTAATGAACATAAGAGAATTCATACTGGAGAGAAACCTTTTACTTGTGAAGAATGTGGC--  879

Query  705  AGC--CTTTAGACGGTCCACAGTTCTGA-AC------GAACATAAGAAAATTCATACTGGAGAGAAACCCTACA  769
            |||  |||||      ||||| |.||.| ||      .|.|||||.|.|||||||||||||||.||||||||.|
Sbjct  880  AGCATCTTTA------CCACA-TCCTCACACTTTGCTAAGCATAAAATAATTCATACTGGAGAAAAACCCTATA  946

Query  770  AATGTGAAGAATGTGGCAAAGCCTTTACAAGGTCCACAACACTGAATGAACACAAGAAAATTCATACTGGAGAG  843
            |||||||||||||||||||||||||||..||||.||||||.||.|.|.||||.||||.|||||||.||||||||
Sbjct  947  AATGTGAAGAATGTGGCAAAGCCTTTAATAGGTTCACAACCCTTACTAAACATAAGAGAATTCATGCTGGAGAG  1020

Query  844  AAACCCTACAAATGTAAAGAATGTGGCAAAGCCTTTAGATGGTCCACAAGCATGAATGAACATAAGAATATTCA  917
            ||||||     ||                                                             
Sbjct 1021  AAACCC-----AT-------------------------------------------------------------  1028

Query  918  TACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCCTTTAGACAGTCCAGGAGCCTGAATGAACATA  991
                                                                                      
Sbjct 1029  --------------------------------------------------------------------------  1028

Query  992  AAAATATTCATACTGGCGAAAAACCCTACACATGTGAAAAATGT-GGCAAAGCTTTTAACC-AATCCTCAAGTC  1063
                                        ||||||||||.||||| ||.|||.||||  ||| .||||||     
Sbjct 1029  ----------------------------CACATGTGAAGAATGTAGGAAAATCTTT--ACCTCATCCTC-----  1067

Query 1064  TTATTATACACAGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGAATGTGGCAAAGCCTTTACTTGG  1137
                                            |||||||                       |||         
Sbjct 1068  --------------------------------AAACTTT-----------------------GCC---------  1077

Query 1138  TCCTCATCCCTTAATAAACATAAGAGAATTCATACTGGAGAGAAACCCTACGCATGTGAAGAATGTGGCAAAGC  1211
                           |||||||||.||||||||||||||||||||||||||..|||||||||||||||||||||
Sbjct 1078  ---------------AAACATAAGCGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGC  1136

Query 1212  TTTTTATAGGTCCTCACACCTTGCTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACACGTGCGAAGAAT  1285
            .|||.||||||||.||..||||.||||||||||||||||||||||||||||||||||||||||           
Sbjct 1137  CTTTAATAGGTCCACAACCCTTACTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACAC-----------  1199

Query 1286  GTGGCAAAGCTTTTAACCAATCCTCAACTCTTATATTACACAAGAGAATCCATTCTGGGCAAAAACCTTACAAA  1359
                                                                                     |
Sbjct 1200  -------------------------------------------------------------------------A  1200

Query 1360  TGTGAAGAATGTGGCAAAGCCTTTACACGGTCCACAACACTGAACGAACATAAGAAAATTCATACTGGCGAGAA  1433
            ||||||||||||||||||||.||||.||.||||.|||.||||||.||||||||||||.||||||||||.|||..
Sbjct 1201  TGTGAAGAATGTGGCAAAGCTTTTAGACAGTCCTCAAAACTGAATGAACATAAGAAAGTTCATACTGGAGAGCG  1274

Query 1434  ACCCTACAAATGTGAAGAATGTGGCAAAGCTTTCATATGGTCCGCAAG---CCTGAATGAACATAAGAATATTC  1504
            .||||||||||||||.||||||||||||||.||...|.|||||   ||   |||||||||||||||.||.||||
Sbjct 1275  GCCCTACAAATGTGATGAATGTGGCAAAGCCTTTGGACGGTCC---AGGGTCCTGAATGAACATAAAAAAATTC  1345

Query 1505  ATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAACCAATCCTCAGGCCTTATTATACAC  1578
            |||||||||||||||||                                                         
Sbjct 1346  ATACTGGAGAGAAACCC---------------------------------------------------------  1362

Query 1579  AGGAGCATTCATTCTGAACAAAAACTTTACAAATGTGAAGAATGTGGCAAAGCCTTTACTCGGTCCACAGCCCT  1652
                                       |||||||||||||||||||||||||||||||..||||||||||..|.
Sbjct 1363  ---------------------------TACAAATGTGAAGAATGTGGCAAAGCCTTTAGACGGTCCACAGATCG  1409

Query 1653  GAATGAACATAAGAAAATTCATTCTGGAGAGAAACCCTACAAATGCAAAGAATGTGGCAAAGCCTATA---ACT  1723
            ||.|.|||||||||||||||||..||.|||.||||||||||||||.||||||||||.||||||||.||   |.|
Sbjct 1410  GAGTCAACATAAGAAAATTCATAGTGCAGATAAACCCTACAAATGTAAAGAATGTGACAAAGCCTTTAAACAAT  1483

Query 1724  TATC-CTCAACCCTTACTAAACATAAGAGAATTCATACTGGAGAGAAACCCTTCACATGTGAAGAATGTGGCAA  1796
            |.|| ||    |||.|.|.|||||||||.|||||||||||.|||.|||||||.||.||||.||||.||||.|||
Sbjct 1484  TTTCGCT----CCTGAGTCAACATAAGAAAATTCATACTGTAGATAAACCCTACAAATGTAAAGATTGTGACAA  1553

Query 1797  AGCCTTCAATTGGTCCTCATCCCTTACTAAACATAAGATAATTCATACTGGAGAGAAATCCTACAAATGTGAAG  1870
            ||||||.||..|||.||||..|||.|.|||||||||||.||||||||||                         
Sbjct 1554  AGCCTTTAAACGGTTCTCACACCTGAATAAACATAAGAAAATTCATACT-------------------------  1602

Query 1871  AATGTGGCAAAGCTTTTAATCGGCCCTCAACCCTTACTGTACACAAGCGAATTCATACTGGCAAGGAACATAGT  1944
                                                                                      
Sbjct 1603  --------------------------------------------------------------------------  1602

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