Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09825
Subject:
NR_146872.1
Aligned Length:
2406
Identities:
1045
Gaps:
1359

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCGTCCTGTTCCCGCCTCTCCAGTTAAGGCCGCTGGTGTGAGCCGGGGCTCTGCGCGAGCGAGGGACGACGGAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCGACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GAGGACGCACAGAGATCCCTCGCCGCGCGGAGGAGGAGCAGCGCGGGAGCCAGGCGCTGCCCCAAGACCCTGCC  222

Query    1  ---------------------------------------------------------ATGGAAGAGGAGAAATA  17
                                                                     |||||||||||||||||
Sbjct  223  TGCGTCCGAGCGAGCGGAACCTCGCGCTTCGCCCGGGGACAATCCGAAGTCCGCGCTATGGAAGAGGAGAAATA  296

Query   18  TTTGCCTGAGCTGATGGCAGAGAAAGATAGCCTGGATCCATCTTTTGTGCATGCGTCGCGCCTTTTGGCAGAAG  91
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  TTTGCCTGAGCTGATGGCAGAGAAAGATAGCCTGGATCCATCTTTTGTGCATGCGTCGCGCCTTTTGGCAGAAG  370

Query   92  AAATTGAAAAGTTTCAAGGTTCTGATGGAAAAAAGGAAGACGAAGAAAAGAAGTATCTTGATGTCATCAGCAAC  165
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AAATTGAAAAGTTTCAAGGTTCTGATGGAAAAAAGGAAGACGAAGAAAAGAAGTATCTTGATGTCATCAGCAAC  444

Query  166  AAAAACATAAAGCTCTCAGAAAGAGTACTGATTCCTGTCAAGCAGTATCCAAAGTTCAATTTTGTGGGGAAATT  239
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAAAACATAAAGCTCTCAGAAAGAGTACTGATTCCTGTCAAGCAGTATCCAAAGTTCAATTTTGTGGGGAAATT  518

Query  240  GCTTGGACCAAGAGGAAACTCCTTGAAGAGGCTACAGGAAGAAACAGGTGCTAAAATGTCTATCCTGGGCAAAG  313
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  GCTTGGACCAAGAGGAAACTCCTTGAAGAGGCTACAGGAAGAAACAGGTGCTAAAATGTCTATCCTGGGCAAAG  592

Query  314  GATCAATGAGAGATAAAGCTAAGGAAGAAGAACTAAGGAAGAGTGGGGAAGCCAAATATGCCCACTTGAGTGAT  387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  GATCAATGAGAGATAAAGCTAAGGAAGAAGAACTAAGGAAGAGTGGGGAAGCCAAATATGCCCACTTGAGTGAT  666

Query  388  GAGCTTCATGTATTAATTGAAGTGTTTGCTCCACCTGGGGAAGCTTATTCACGTATGAGTCATGCATTGGAAGA  461
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGCTTCATGTATTAATTGAAGTGTTTGCTCCACCTGGGGAAGCTTATTCACGTATGAGTCATGCATTGGAAGA  740

Query  462  GATTAAAAAATTCCTGGTTCCTGACTACAATGATGAAATTCGTCAGGAACAACTACGTGAATTATCTTACTTAA  535
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GATTAAAAAATTCCTGGTTCCTGACTACAATGATGAAATTCGTCAGGAACAACTACGTGAATTATCTTACTTAA  814

Query  536  ATGGCTCAGAGGACTCTGGTCGTGGCAGAGGTATTAGAGGCAGAGGGATCAGAATAGCTCCCACAGCTCCTTCA  609
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  ATGGCTCAGAGGACTCTGGTCGTGGCAGAGGTATTAGAGGCAGAGGGATCAGAATAGCTCCCACAGCTCCTTCA  888

Query  610  AGGGGCCGTGGGGGTGCCATTCCTCCTCCCCCACCACCTGGACGAGGTGTTCTCACCCCTCGGGGAAGCACTGT  683
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  AGGGGCCGTGGGGGTGCCATTCCTCCTCCCCCACCACCTGGACGAGGTGTTCTCACCCCTCGGGGAAGCACTGT  962

Query  684  AACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGAGGTGTCCCTACCCCTCGAGCCCGGGGGGCACCAACAG  757
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  AACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGAGGTGTCCCTACCCCTCGAGCCCGGGGGGCACCAACAG  1036

Query  758  TGCCAGGATACAGGGCACCTCCTCCTCCAGCCCATGAAGCTTATGAAGAATATGGTTATGATGATGGCTACGGG  831
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  TGCCAGGATACAGGGCACCTCCTCCTCCAGCCCATGAAGCTTATGAAGAATATGGTTATGATGATGGCTACGGG  1110

Query  832  GGTGAATATGATGACCAGACCTATGAGACTTATGATAACAGCTACGCGACCCAAACACAAAG------------  893
            ||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||            
Sbjct 1111  GGTGAATATGATGACCAGACCTATGAGACTTATGATAACAGCTATGCGACCCAAACACAAAGAACTTACAGAGT  1184

Query  894  --------------------------------------------------------------TGTGCCTGAATA  905
                                                                          ||||||||||||
Sbjct 1185  TTGTGGTCAATGAAGGCTTAGGAATGGACCTGATGGCAAAGATGAAGAAGATAGACAGCCAATGTGCCTGAATA  1258

Query  906  CTATGACTACGGTCATGGAGTAAGTGAGGATGCCTATGACAGCTACGCACCAGAAGAATGGGCCACAACCAGCT  979
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
Sbjct 1259  CTATGACTACGGTCATGGAGTAAGTGAGGATGCCTATGACAGCTACGCACCAGAAGAATGGGCCACAACCCGCT  1332

Query  980  CTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGAACACCCCTATGGTAGATAT------  1047
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
Sbjct 1333  CTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGGAACACCCCTATGGTAGATATTGAAGG  1406

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1407  TCCTTCCCACCTGTGACCTCACCTCAAAGACAATTCATAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAG  1480

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1481  TAATAGTCCTTTTTTTGTTTGTTTGTTTCTATTCTAGGGATAACTGCTCATGATTACTCCCATATATTTCTAGT  1554

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1555  ATTTCCCTCTGTACTGTTGGCGTGACATTGACACTAGTATTATTTTACAAAACAGACTGAAAAAGACATTAGCA  1628

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1629  AGCATAGTCTATAAACCTTTCAGTAGGATGATATTCTCTTGGTTGTTTTTCATTGTTGTGTGTAATCTTTTTTT  1702

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1703  TTTCTTTTTCTTTTTTTTTTTTTTGAGGAAAAGCATGAATTTGTTAACAGATTTTGAGTCTCAACCAACTAGCA  1776

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1777  GAAACTTTGTTTAGGGTTGCTAAAAGACTGTAATATGATTTTTGAACTAGCTGATAATAAAGTTGTAGATAAGA  1850

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1851  TGTTTTAACCTGTCTTTTAATATCTGTTAGTTAGACAAAGATGTTTGATATTAAGTTTGTAAATTTAATTTTAA  1924

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1925  TGCTGTTTTAATGGGGTTGAAAACAAGCAGCTACTGTATGTATGTAGCTAACTGAATTTGTTCAGTGTTTTAAC  1998

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1999  CTGTATTTGTTAAAAAAGAAAAAAAAACACACATAAAGTTCCATGTGTAAGCTTCTCTAAATAGGAAACCACAA  2072

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 2073  TTTGTCAAATATGTTTGCCATAATTTGTCAATAAAGCTGAAAACTTTTGTAAAAATTAAATTTGGAATTACTTG  2146

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 2147  TTTTCTAGCTTTAAATGCCTGCTTTATTTCTTCTTCAAGAGATGCCTAAAATGTTTTCTATTTAAAAATTACAA  2220

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 2221  AAATGAACCCAAGTCTGTTTTAAGATATTTGTGTAATACTTAAAAATGTATTAATAACTTATGGTTGTTAAATA  2294

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 2295  ATTTAAAAGTTAACAAACTAAACTGTTACATGAATCATGGTTAGTAAACACTAATGTATAACATGTTAATGGAA  2368

Query 1048  --------------------------------------  1047
                                                  
Sbjct 2369  AAAAATGGATTTAGAATAATAAATGGATTTTAAACTAT  2406

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