Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09825
Subject:
XR_001743212.1
Aligned Length:
1808
Identities:
898
Gaps:
908

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAGCCGGGGCTCTGCGCGAGCGAGGGACGACGGAAGGGACGGGCAGGTGTGGGCGCGGGGCCACGCAGCCCG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ACGGCGGGAGTCGCAGGTGCTGGGTGCATGGGCCAGTGAGGACGCACAGAGATCCCTCGCCGCGCGGAGGAGGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCAGCGCGGGAGCCAGGCGCTGCCCCAAGACCCTGCCTGCGTCCGAGCGAGCGGAACCTCGCGCTTCGCCCGGG  222

Query    1  --------------------ATGGAAGAGGAGAAATATTTGCCTGAGCTGATGGCAGAGAAAGATAGCCTGGAT  54
                                ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  223  GACAATCCGAAGTCCGCGCTATGGAAGAGGAGAAATATTTGCCTGAGCTGATGGCAGAGAAAGATAGCCTGGAT  296

Query   55  CCATCTTTTGTGCATGCGTCGCGCCTTTTGGCAGAAGAAATTGAAAAGTTTCAAGGTTCTGATGGAAAAAAGGA  128
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  297  CCATCTTTTGTGCATGCGTCGCGCCTTTTGGCAGAAGAAATTGAAAAGTTTCAAGGTTCTGATGGAAAAAAGGA  370

Query  129  AGACGAAGAAAAGAAGTATCTTGATGTCATCAGCAACAAAAACATAAAGCTCTCAGAAAGAGTACTGATTCCTG  202
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  371  AGACGAAGAAAAGAAGTATCTTGATGTCATCAGCAACAAAAACATAAAGCTCTCAGAAAGAGTACTGATTCCTG  444

Query  203  TCAAGCAGTATCCAAAGTTCAATTTTGTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGAAGAGGCTACAG  276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  TCAAGCAGTATCCAAAGTTCAATTTTGTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGAAGAGGCTACAG  518

Query  277  GAAGAAACAGGTGCTAAAATGTCTATCCTGGGCAAAGGATCAATGAGAGATAAAGCTAAGGAAGAAGAACTAAG  350
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
Sbjct  519  GAAGAAACAGGTGCTAAAATGTCTATCCTGGGCAAAGGATCAATGAGAGATAAAGCTAAG--------------  578

Query  351  GAAGAGTGGGGAAGCCAAATATGCCCACTTGAGTGATGAGCTTCATGTATTAATTGAAGTGTTTGCTCCACCTG  424
                                                                                      
Sbjct  579  --------------------------------------------------------------------------  578

Query  425  GGGAAGCTTATTCACGTATGAGTCATGCATTGGAAGAGATTAAAAAATTCCTGGTTCCTGACTACAATGATGAA  498
                                                                       |||||||||||||||
Sbjct  579  -----------------------------------------------------------GACTACAATGATGAA  593

Query  499  ATTCGTCAGGAACAACTACGTGAATTATCTTACTTAAATGGCTCAGAGGACTCTGGTCGTGGCAGAGGTATTAG  572
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  594  ATTCGTCAGGAACAACTACGTGAATTATCTTACTTAAATGGCTCAGAGGACTCTGGTCGTGGCAGAGGTATTAG  667

Query  573  AGGCAGAGGGATCAGAATAGCTCCCACAGCTCCTTCAAGGGGCCGTGGGGGTGCCATTCCTCCTCCCCCACCAC  646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  668  AGGCAGAGGGATCAGAATAGCTCCCACAGCTCCTTCAAGGGGCCGTGGGGGTGCCATTCCTCCTCCCCCACCAC  741

Query  647  CTGGACGAGGTGTTCTCACCCCTCGGGGAAGCACTGTAACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGA  720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  742  CTGGACGAGGTGTTCTCACCCCTCGGGGAAGCACTGTAACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGA  815

Query  721  GGTGTCCCTACCCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGATACAGGGCACCTCCTCCTCCAGCCCATGA  794
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  816  GGTGTCCCTACCCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGATACAGGGCACCTCCTCCTCCAGCCCATGA  889

Query  795  AGCTTATGAAGAATATGGTTATGATGATGGCTACGGGGGTGAATATGATGACCAGACCTATGAGACTTATGATA  868
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  890  AGCTTATGAAGAATATGGTTATGATGATGGCTACGGGGGTGAATATGATGACCAGACCTATGAGACTTATGATA  963

Query  869  ACAGCTACGCGACCCAAACACAAAGTGTGCCTGAATACTATGACTACGGTCATGGAGTAAGTGAGGATGCCTAT  942
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  964  ACAGCTATGCGACCCAAACACAAAGTGTGCCTGAATACTATGACTACGGTCATGGAGTAAGTGAGGATGCCTAT  1037

Query  943  GACAGCTACGCACCAGAAGAATGGGCCACAACCAGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGG  1016
            |||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1038  GACAGCTACGCACCAGAAGAATGGGCCACAACCCGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGG  1111

Query 1017  GGGATACAGGGAACACCCCTATGGTAGATAT-------------------------------------------  1047
            |||||||||||||||||||||||||||||||                                           
Sbjct 1112  GGGATACAGGGAACACCCCTATGGTAGATATTGAAGGTCCTTCCCACCTGTGACCTCACCTCAAAGACAATTCA  1185

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1186  TAGCCTGTGGTCTCCACATAAACAGCAACAAGACAAGTACCCACAAACAAAGAACACATAATTGAATAACCGAT  1259

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1260  GTGATTTGCTAAGAAGGATGGAGGTGAAGATGTATGATAGAAAAACGAAAAACTGGAATAAACCCAAGACTGGC  1333

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1334  TGTTTGGAGGTTTAATGTTTTTAACAATGGAGGCCAAAAAAGAAGATAATTTGGATTTGAACCAATATTTTCTT  1407

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1408  CATCTCAACTCACCTCACCACTACGGATCCAAGCCTGACACAGAGCCTAACAGAATTTTAATTTTCAGCAAAAC  1481

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1482  TTTGAAGGGGAAGGGCAAAAGGGAAGATTTCCCTTGGCCCGTTCATTTTTGGCACTGTGAGCAAGATAACCAAA  1555

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1556  CCCACTCTGCTCTTCTGGAAGCTGAAGTCAAAGGAACACTGGACCTGACAAGTCAGCAGAAGGGTAAGAATTTC  1629

Query 1048  --------------------------------  1047
                                            
Sbjct 1630  TTACTTTCACTTGTGTCCATGTGAACAGACCA  1661

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