Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09825
Subject:
XR_001783141.1
Aligned Length:
2187
Identities:
955
Gaps:
1140

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GCTTCCAATAGGAAGCCGGCGGGGTTGGGCCGCACGGGCATCCTCTCCAGCTGAGGCCACGGCCGGAGCCTGGC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGGCGCGGGAGAGGCAGGTACCAGCGCGGTCTGCGCAGCCCCAGGCGCTAGAGCTGCGCTCTACGGTGGAAG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AACGGTTCCCGGGGGAGCCAGGGACCAAGGCGTCGGAGCGGGCGGAAATTGCGCCTGACCGGGCACGGTCCGAA  222

Query    1  ---------ATGGAAGAGGAGAAATATTTGCCTGAGCTGATGGCAGAGAAAGATAGCCTGGATCCATCTTTTGT  65
                     ||||.|||.||||||||.|||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct  223  GTCCGCGCTATGGGAGAAGAGAAATACTTGCCTGAGCTGATGGCAGAGAAGGATAGCCTGGATCCATCTTTTGT  296

Query   66  GCATGCGTCGCGCCTTTTGGCAGAAGAAATTGAAAAGTTTCAAGGTTCTGATGGAAAAAAGGAAGACGAAGAAA  139
            |||.||||||||||||.||||.|||||||||||.||.|||||||||||.|||||.|||||||||||.|||||||
Sbjct  297  GCACGCGTCGCGCCTTCTGGCGGAAGAAATTGAGAAATTTCAAGGTTCAGATGGGAAAAAGGAAGATGAAGAAA  370

Query  140  AGAAGTATCTTGATGTCATCAGCAACAAAAACATAAAGCTCTCAGAAAGAGTACTGATTCCTGTCAAGCAGTAT  213
            ||||.|||||.||||||||||||||||||||||||||||||||.|||||||||.||||||||||.||.||||||
Sbjct  371  AGAAATATCTCGATGTCATCAGCAACAAAAACATAAAGCTCTCTGAAAGAGTATTGATTCCTGTGAAACAGTAT  444

Query  214  CCAAAGTTCAATTTTGTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGAAGAGGCTACAGGAAGAAACAGG  287
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||.||
Sbjct  445  CCAAAGTTCAATTTTGTGGGGAAATTGCTTGGACCAAGAGGAAACTCCTTGAAGAGGCTACAAGAAGAAACGGG  518

Query  288  TGCTAAAATGTCTATCCTGGGCAAAGGATCAATGAGAGATAAAGCTAAGGAAGAAGAACTAAGGAAGAGTGGGG  361
            |||||||||||||||||||||||||||.||.|||.|||||||..|.|||||||||||.||.|||||||||||||
Sbjct  519  TGCTAAAATGTCTATCCTGGGCAAAGGGTCCATGCGAGATAAGACAAAGGAAGAAGAGCTGAGGAAGAGTGGGG  592

Query  362  AAGCCAAATATGCCCACTTGAGTGATGAGCTTCATGTATTAATTGAAGTGTTTGCTCCACCTGGGGAAGCTTAT  435
            |.|||||.|||||||||.|||||||||||||.|||||||||||||||||||||||||||||.||||||||||||
Sbjct  593  AGGCCAAGTATGCCCACCTGAGTGATGAGCTGCATGTATTAATTGAAGTGTTTGCTCCACCCGGGGAAGCTTAT  666

Query  436  TCACGTATGAGTCATGCATTGGAAGAGATTAAAAAATTCCTGGTTCCTGACTACAATGATGAAATTCGTCAGGA  509
            |||||.|||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct  667  TCACGGATGAGTCATGCCTTGGAAGAGATTAAAAAATTCCTGGTTCCTGACTACAATGATGAAATTCGTCAAGA  740

Query  510  ACAACTACGTGAATTATCTTACTTAAATGGCTCAGAGGACTCTGGTCGTGGCAGAGGTATTAGAGGCAGAGGGA  583
            .|||||.||.||.||.||||||||.|||||||||||.||.|||||.||.|||.|||||||||||||||||||||
Sbjct  741  GCAACTCCGGGAGTTGTCTTACTTGAATGGCTCAGAAGAGTCTGGCCGGGGCCGAGGTATTAGAGGCAGAGGGA  814

Query  584  TCAGAATAGCTCCCACAGCTCCTTCAAGGGGCCGTGGGGGTGCCATTCCTCCTCCCCCACCACCTGGACGAGGT  657
            ||||||||.|||||||||||||.||||||||||||||.|||||..||||.||.||.||||||||||||||||||
Sbjct  815  TCAGAATAACTCCCACAGCTCCATCAAGGGGCCGTGGCGGTGCTGTTCCACCACCACCACCACCTGGACGAGGT  888

Query  658  GTTCTCACCCCTCGGGGAAGCACTGTAACCCGTGGAGCGCTTCCAGTGCCACCTGTAGCAAGAGGTGTCCCTAC  731
            ||.||.|||||||||||.|.||||||.|||||||||||.|||||||||||.||..||||||||||||||||.||
Sbjct  889  GTGCTTACCCCTCGGGGGACCACTGTGACCCGTGGAGCTCTTCCAGTGCCCCCAATAGCAAGAGGTGTCCCCAC  962

Query  732  CCCTCGAGCCCGGGGGGCACCAACAGTGCCAGGATACAGGGCACCTCCTCCTCCAGCCCATGAAGCTTATGAAG  805
            .|||||||||||||||.|..||.||||.|||||||||||.|||||.||.||||||||.|||||.||||||||||
Sbjct  963  ACCTCGAGCCCGGGGGACGGCAGCAGTACCAGGATACAGAGCACCCCCACCTCCAGCTCATGATGCTTATGAAG  1036

Query  806  AATATGGTTATGATGATGGCTACGGGGGTGAATATGATGACCAGACCTATGAGACTTATGATAACAGCTACGCG  879
            |||||||.||||||||||||||.||||||||||||||||||||||||||||||.||||||||||.|||||||.|
Sbjct 1037  AATATGGGTATGATGATGGCTATGGGGGTGAATATGATGACCAGACCTATGAGGCTTATGATAATAGCTACGTG  1110

Query  880  ACCCAAACACAAAGTGTGCCTGAATACTATGACTACGGTCATGGAGTAAGTGAGGATGCCTATGACAGCTACGC  953
            ||||.||||||||||||||||||||||||||||||||||||||||||||..|||||||||||.|||||||||||
Sbjct 1111  ACCCCAACACAAAGTGTGCCTGAATACTATGACTACGGTCATGGAGTAAACGAGGATGCCTACGACAGCTACGC  1184

Query  954  ACCAGAAGAATGGGCCACAACCAGCTCTAGCTTGAAGGCACCACCGCAAAGGTCAGCCAGAGGGGGATACAGGG  1027
            |||||||||||||||||||||..||||.|||.|||||||||||||.|.||||||||||||||||||||||||||
Sbjct 1185  ACCAGAAGAATGGGCCACAACTCGCTCCAGCCTGAAGGCACCACCACCAAGGTCAGCCAGAGGGGGATACAGGG  1258

Query 1028  AACACCCCTATGGTAGATAT------------------------------------------------------  1047
            |.||||||||||||||||||                                                      
Sbjct 1259  AGCACCCCTATGGTAGATATTGAAGGTCCTCTTCATCTGTGACCTCCTCAAAGACAATTCATAGCCTGTGGTCT  1332

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1333  CCACATAAACAGCAACAAGACAAGTCCGCACAATGAGCACATATATGGTAGCAGATATGATGGCCTAAAGGGGG  1406

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1407  ATACAGTTGATGGCCATTTTGGTATCCCCATGTCTTGACTACTGGGAATAGAGATACAGTGAACATAGGAATAC  1480

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1481  AGACTAAAGGAGTTATTTTGGCCTACAGCTGAAAAGGATGGCATCATAATAGAAATGAGAGTTGGATGGATTAT  1554

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1555  CAGATATAGAGAAAAAGTCATCATATTAGATAATAAGTGGGAATCCCAGATGTCTGTCAATCAGATCCATACCT  1628

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1629  CCAAGACAAAGAAAATAAAAATCAAAATGCACAGAGAACAATACTGATTTTCATTATTGAAATATTCAAATGGT  1702

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1703  GACTGGGTTGTCAAATTCATCAAAGAAATTATATATTGACTGTGACACAGCTTTATTGAGACTGCTGAAAGTCC  1776

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1777  CCAGGGAATAGAAGATAAAATCCCCTGCAGCTTGAACTACCGGATTAGAAGGAAATTTCTAAATGAAACTTGCT  1850

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1851  AATGAAGACAACACACTGCTGAGGAAATAATGGGAAATTCAGTGTCGGCGGCTGATACAACTAACTTGAAATAA  1924

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1925  AGCATTTTTGGAGTAGAGAATAGTGAAAAGGTGGCAAATCCCCAAATCTGTAAGGGAAATAGTTAAATACAAGT  1998

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 1999  TGCATCCAGGGGCCATTTAGCATCCGGTGTTTTGGATATAGTTAATAAAAAGGTATAAGGAACAATACCAGCCT  2072

Query 1048  --------------------------------------------------------------------------  1047
                                                                                      
Sbjct 2073  TGGCACTATAAAAAGCAATCAAACTGTTTAGATATTTAAATAAAAGTTTTTTTTTCATTTTGTAGAAATGCTAT  2146

Query 1048  -----------------------------------------  1047
                                                     
Sbjct 2147  TTGAATGTACAAATGGAATTAATAAAACATGATTTTGGAAA  2187

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