Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_09908
Subject:
NM_001348278.2
Aligned Length:
1445
Identities:
522
Gaps:
853

Alignment

Query    1  ATGGAACTCTTAACATTCAAGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGTCTGGACACTTCCCA  74
            |||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||.||||||.||..|||
Sbjct    1  ATGGAACTCTTAACATTCAGGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGCCTGGACCCTGACCA  74

Query   75  GCAGAATTTATATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTGGGTGTTAGTATCTCTAACC  148
            |||||||||.|||||||||||||||||||||||||||||.|||||||||||||||||||||..|||||||||||
Sbjct   75  GCAGAATTTGTATAGAGATGTGATGTTGGAGAACTACAGGAACCTGGTCTCCCTGGGTGTTGCTATCTCTAACC  148

Query  149  CAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCCAGACCC  222
            ||||||||||||||.|||||||||||||||||||||||||||||.|||||||||||.|.|..|.||||||||||
Sbjct  149  CAGACCTGGTCACCTGTCTGGAGCAAAGAAAAGAGCCCTACAATGTGAAGATACATAAGATCGTAGCCAGACCC  222

Query  223  CCAGCTGTGTGTTCTCATTTCACCCAAAACCTTTGGACAGTGCAGGGCATAGAAGATTCATTCCACAAACTTAT  296
            ||||||.||||||||||||||||||||.|||.||||.|||||||||||||||||||||||||||||||||||||
Sbjct  223  CCAGCTATGTGTTCTCATTTCACCCAAGACCATTGGCCAGTGCAGGGCATAGAAGATTCATTCCACAAACTTAT  296

Query  297  ACCAAAAGGACATGAGAAACGTGGACATGAGAAT------TTAAGAAAAACTTGTAAAAGTATAAATGAGTGTA  364
            ||..|.|.||.||||||||.||||||||||.|||      |||||||||...|||||||||.|.||||||||||
Sbjct  297  ACTGAGAAGATATGAGAAATGTGGACATGATAATTTACAATTAAGAAAAGGCTGTAAAAGTTTGAATGAGTGTA  370

Query  365  AGGTGCAGAAAGGTGGTTATAATAGAA-TTAACCAATGCTTATTAACTACCCAGAAAAAAACAATTCAATCTAA  437
            ||.||||||||||.||||||||| ||| ||||..|||||||.|.|||||||||||..||||.|.||||.|.|||
Sbjct  371  AGTTGCAGAAAGGAGGTTATAAT-GAATTTAATGAATGCTTGTCAACTACCCAGAGCAAAATACTTCAGTGTAA  443

Query  438  TATATGTGTCAAAGTTTTTCATAAATTTTCAAATTCAAACAAAGATAAGATAAGATATACTGGAGATAAAACCT  511
            ...|.|||||||||||.||..||||||||||||||||||||||..|||||.||||.||||||||||.|||..||
Sbjct  444  AGCAAGTGTCAAAGTTGTTAGTAAATTTTCAAATTCAAACAAACGTAAGACAAGACATACTGGAGAGAAACACT  517

Query  512  TTAAATGTAAAGAATGTGGCAAATCATTTCACGTGCTCTCACGCCTAACTCAACACAAAAGAATTCATACTGGA  585
            |      ||||||||||||||||||||||||...|.|.||||.|||||||||  |||.||||||||.|.|    
Sbjct  518  T------TAAAGAATGTGGCAAATCATTTCAGAAGTTTTCACACCTAACTCA--ACATAAGAATTCTTCC----  579

Query  586  GAGAACCCCTACACATGTGAAGAATGTGGCA--AAGCC--TTTAATTGGTCCTCAATTCTTACTAAACATAAGA  655
                |.|.|||               ||.||  |||||  |||                               
Sbjct  580  ----ATCTCTA---------------TGACAACAAGCCCATTT-------------------------------  603

Query  656  GAATTCATGCCAGAGAGAAATTCTACAAGTGTGAAGAATGTGGTAAAGGCTTTACTCGGTCCTCACACCTTACT  729
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query  730  AAACATAAGAGAATTCATACTGGAGAGAAACCCTACATATGTGAAAAATGTGGTAAAGCTTTTAACCAATCCTC  803
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query  804  AACCCTTAATTTACATAAGAGAATTCATTCTGCACAAAAATACTACAAATGTGAAGAATGTGGTAAAGCCTTTA  877
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query  878  AGTGGTCCTCATCCCTTAATGAACATAAGAGAATTCATGCTGGAGAGAAACCCTTCTCATGCGAAGAATGTGGC  951
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query  952  AATGTCTTTACCACATCCTCAGACTTTGCTAAACATAAGAGAATTCATACAGGAGAGAAACCCTACAAATGTGA  1025
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query 1026  AGAATGTGGAAAATCCTTTAATAGGTCCACAACTCTTACGACACATAAGAGAATCCATACTGGAGAGAAACCCT  1099
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query 1100  ACACATGTGAAGAATGTGGAAAAGCCTTTAATTGGTCCTCAACCCTTAATGTACACAAGAGAATTCACTCTGGA  1173
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query 1174  AAAAATCCCTACAAATGTGAAGATTGTGGCAAAGCCTTTAAAGTGTTTGCAAACCTGCATAATCATAAGAAAAT  1247
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query 1248  TCATACTGGAGAGAAACCCTACATATGTAAACAATGTGGCAAAGCCTTTAAACAGTCCTCACACTTGAATAAAC  1321
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query 1322  ATAAGAAAATTCACACTGTAGATAAACCCTACAAATGTAAAGAATGCGGGAAAGCTTTTAAGCAGTACTCCAAC  1395
                                                                                      
Sbjct  604  --------------------------------------------------------------------------  603

Query 1396  CTTCCTCAACATAAGAGAACTCATACTGGAGGAAAATTT  1434
                                                   
Sbjct  604  ---------------------------------------  603

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