Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10010
Subject:
XM_011250584.2
Aligned Length:
1237
Identities:
1032
Gaps:
17

Alignment

Query    1  ATGATAGGCATGTTGGAAAGTCTTCAGCATGAATCAGATCTCCTTCAGCATGATCAAATTCATACTGGAGAGAA  74
                     ||||||||.||.|||||||.|||.|||.||   ||||.||||||..||..|.||.|.|||||||.
Sbjct    1  ---------ATGTTGGAGAGCCTTCAGCCTGAGTCACAT---CTTCTGCATGACGAACCTGATCCCGGAGAGAG  62

Query   75  ACCTTATGAATGTAATGAATGTAGAAAAACTTTTAGCCTGAAGCAAAACCTTGTAGAGCATAAGAAAATGCATA  148
            ...||||||||||||||||||||...|.||.||.|||.||.|.||||||.|||||||.||||||||||.|||||
Sbjct   63  TGTTTATGAATGTAATGAATGTAAGGAGACCTTCAGCTTGGAACAAAACTTTGTAGAACATAAGAAAACGCATA  136

Query  149  CTGGAGAGAAATCTCATGAATGCACTGAATGTGGTAAAGTGTGCTCTCGAGTCTCATCTCTTACTCTACACCTT  222
            .|||||||||.||.|.|||.||.||.|..|||||..|||.||.|||.|.||.|||.||..|.||||||||.||.
Sbjct  137  GTGGAGAGAAGTCCCCTGAGTGTACAGGGTGTGGCGAAGAGTCCTCACAAGCCTCCTCATTAACTCTACATCTG  210

Query  223  AGAAGTCACACAGGAAAGAAGGCATATAAATGTAATAAATGTGGAAAAGCCTTCAGCCAGA-AGGAAAACTTCC  295
            |||||||.|.||.|.|.|.||.|.||.||.|||....|||||||.||.||||||||||||| ||| ||||||||
Sbjct  211  AGAAGTCGCCCAAGGAGGGAGTCCTACAAGTGTGGGGAATGTGGGAAGGCCTTCAGCCAGAGAGG-AAACTTCC  283

Query  296  TTTCTCATCAGAAACATCACACTGGAGAGAAACCTTATGAATGTGAAAAAGTTTCTATTCAGATGCCAACCATC  369
            ||||||||||||||||.||.||.|.|||||.|||...|||||.|.|.|||..|.|..|||..|||.||||||.|
Sbjct  284  TTTCTCATCAGAAACAACATACCGAAGAGAGACCCAGTGAATCTAAGAAAACTCCCGTTCCCATGACAACCACC  357

Query  370  ATCAGACACCAGAAAAATCATACAGGAACCAAACCCTATGCATGTAAGGAATGTGGCAAAGCCTTTAACGGCAA  443
            .|.|||.|.||||.||   |.|||||.|..|||||.||.||.||||||||.|||||.|||||||||||.|||||
Sbjct  358  GTTAGAAATCAGAGAA---ACACAGGGAATAAACCATACGCGTGTAAGGAGTGTGGGAAAGCCTTTAATGGCAA  428

Query  444  AGCATATCTCACTGAGCATGAGAAAATTCATACTGGAGAAAAACCATTTGAATGTAATCAGTGTGGAAGAGCCT  517
            ..|||||||||..||.||.|||||||||||.||.|||||.|||||.||||||||||.|||||||||||||||||
Sbjct  429  GTCATATCTCAAAGAACACGAGAAAATTCACACCGGAGAGAAACCGTTTGAATGTAGTCAGTGTGGAAGAGCCT  502

Query  518  TCAGCCAGAAGCAATACCTCATTAAACATCAGAACATCCATACTGGAAAGAAGCCCTTTAAATGTAGTGAGTGT  591
            ||||||||||||||||||||||||||||.|||||.|||||||.|||.|||||.||.|||||.||||.|||||||
Sbjct  503  TCAGCCAGAAGCAATACCTCATTAAACACCAGAATATCCATAGTGGGAAGAAACCTTTTAAGTGTAATGAGTGT  576

Query  592  GGAAAAGCTTTTAGCCAGAAGGAAAACCTCATTATACATCAGAGAATCCATACTGGAGAGAAACCTTATGAATG  665
            ||.||.||||||||||||||.|||||||||||||||||.|||||||||||||||||||||||.|||||||||||
Sbjct  577  GGTAAGGCTTTTAGCCAGAAAGAAAACCTCATTATACACCAGAGAATCCATACTGGAGAGAAGCCTTATGAATG  650

Query  666  TAAAGGGTGTGGGAAAGCTTTCATTCAGAAGTCAAGCCTCATTAGACACCAGAGAAGTCACACAGGAGAGAAAC  739
            ||||||||||||||||||||||||||||||.|||||||||||.|||||||||||||||||.||.||||||||||
Sbjct  651  TAAAGGGTGTGGGAAAGCTTTCATTCAGAAATCAAGCCTCATCAGACACCAGAGAAGTCATACTGGAGAGAAAC  724

Query  740  CTTATACGTGTAAGGAATGTGGGAAAGCCTTCAGTGGCAAGTCAAATCTCACAGAGCATGAGAAAATTCATATT  813
            |.|||||.||||||||||||||.|||||||||||||||||.||||||||.||.|||||||||||||||||||||
Sbjct  725  CGTATACATGTAAGGAATGTGGAAAAGCCTTCAGTGGCAAATCAAATCTGACTGAGCATGAGAAAATTCATATT  798

Query  814  GGAGAGAAACCCTACAAATGTAATGAATGTGGAACAATCTTCAGGCAGAAGCAATACCTCATTAAACATCACAA  887
            ||||||||||||||.||.|||||.|||||||||||.||.|||||||||||.|||||||||||.|||||||||||
Sbjct  799  GGAGAGAAACCCTATAAGTGTAACGAATGTGGAACGATTTTCAGGCAGAAACAATACCTCATCAAACATCACAA  872

Query  888  TATTCATACAGGAGAGAAACCCTATGAATGTAATAAATGTGGAAAAGCCTTCTCTCGAATCACATCACTTATTG  961
            ||||||.||.||.||.||.||||||||.||.|||||.||.||.||||||||.||||||||.|||||.||.||||
Sbjct  873  TATTCACACGGGTGAAAAGCCCTATGAGTGCAATAAGTGCGGGAAAGCCTTTTCTCGAATTACATCGCTCATTG  946

Query  962  TACATGTGAGAATTCATACAGGTGATAAGCCTTATGAGTGTAAGGTCTGTGGGAAAGCCTTCTGTCAAAGCTCA  1035
            |.||||||||||||||.|||||||||||.||.|||||.|||||..||||||||||||||||||||||.||.||.
Sbjct  947  TCCATGTGAGAATTCACACAGGTGATAAACCCTATGAATGTAAAATCTGTGGGAAAGCCTTCTGTCAGAGTTCC  1020

Query 1036  TCTCTTACTGTGCATATGAGAAGCCATACAGGTGAGAAACCCTATGGTTGTAATGAATGTGGGAAAGCCTTTTC  1109
            ||||||||.|||||||||||.||||||||.|||||||||||||||||.||.||||||||||||||.||||||||
Sbjct 1021  TCTCTTACAGTGCATATGAGGAGCCATACGGGTGAGAAACCCTATGGCTGCAATGAATGTGGGAAGGCCTTTTC  1094

Query 1110  TCAGTTCTCAACCCTTGCTCTGCACATGAGAATCCATACTGGTGAAAAACCTTATCAGTGTAGTGAATGTGGGA  1183
            ||||||||||||.||||||.|.||||||||||||||.|||||.|||||.|||||||||||.|||||.|||||||
Sbjct 1095  TCAGTTCTCAACTCTTGCTTTACACATGAGAATCCACACTGGGGAAAAGCCTTATCAGTGCAGTGAGTGTGGGA  1168

Query 1184  AAGCTTTCAGCCAAAAGTCGCATCACATTAGACACCAGAGAATTCATACCCAT  1236
            |.|||||||||||.|||||.|||||||||||||||||||||||.||.|..|||
Sbjct 1169  AGGCTTTCAGCCAGAAGTCCCATCACATTAGACACCAGAGAATCCACATTCAT  1221

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