Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10239
Subject:
NR_003654.2
Aligned Length:
3951
Identities:
456
Gaps:
3495

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TCCGGTGCTCAGTGGCTAGCCGAATAGCCGTGTTTGGGACCTGGGCTCGGGCTTCTTGCGTCCCCGCTAAGAAC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  ATGTCACGGGGCCGAATCGTCCGTATTCTCTCAGCTTCAAGCTCCTCTACTTTTCAACCAGGTCACTAGCCCTT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GACTCCTCTTATCAAACTTCCGGAACTGCCACCCCACCAGTGACTCCACAGGCACCAGGGCATGCAACAGGGCT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGGACAGGAAGGCTCTCTTCTTCACCTCAAGCCTGCTGGGCTAACACTTGCGATTTTTACTAGAGTTAACTTTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TAATGTATGTCTCTGACTCTAGAATTTCAAGAGAAGTTCCACTTAGTGACTCCTAAGTGGAAGTTCTAAGATGG  370

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct  371  CTTCCCAGTGAGGTGATGAAGAGGTTTGAGCTTTAGAGTGCGGTTGCAAAGCTCTTCTCTGACCTGAACAATGG  444

Query    5  CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC  78
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  445  CTGTAGCTGTGGACCAACAAATCCAGACTCCTTCAGTACAAGATCTCCAAATAGTTAAACTGGAAGAAGATTCC  518

Query   79  CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT  152
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CACTGGGAGCAGGAAATTTCCCTTCAAGGGAATTACCCTGGACCAGAGACATCCTGCCAGAGCTTTTGGCATTT  592

Query  153  CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC  226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  CCGTTACCAAGAAGCATCACGACCCCGAGAGGCCCTCCTCCAGCTCCAGAAGCTCTGTTGTCAGTGGCTAAGGC  666

Query  227  CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG  300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  CAGAGAAGTGTACAAAAGAGCAGATCCTGGAGTTGCTGGTCCTAGAACAGTTCCCGACTGTCCTTCTCCAGGAG  740

Query  301  ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA  374
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  ATCCAGATCTGGGTCAGACAGCAGCATCCGGAGAGTGGAGAGGAGGCAGTGGCCCTGGTGGAAGACTTGCAGAA  814

Query  375  AGAACCTGGAAGACAGAGGCTGGAGCCCTGCCTGATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGG  448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  AGAACCTGGAAGACAGAGGCTGGAGCCCTGCCTGATGTGGCTCTGGGAATTCCTGCAGAGAAGAGCAGGGGTGG  888

Query  449  CCAGGAGA------------------------------------------------------------------  456
            ||||||||                                                                  
Sbjct  889  CCAGGAGATAGTGAGCAGCTCCCAGGAGGCATGGAGGGATCCAGAACCTGGACTGAAGAACCACCTAGAAATAA  962

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct  963  CTCAGCAGAATTCTGAAAATGAGGTCACGCTGGATTTTCCAATCCATAGGCCCAAAGTGAACTCCCACGTGGAG  1036

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1037  TAGGATGAAAACCCACAGCATCTAGATCTTCAAATTCTGGAGAAAAAGAGAGTGTGAAAGACTGCTCAGTGGCT  1110

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1111  GGGGTGAGAGTCAAGTCTGGCCAGGTGCTAATCTGGAGAAAAGCCAAGACCTGGAGCGAGCTGGAGTGGCAGGC  1184

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1185  CCTGGAGGATGAGAAGGTGGCAGGAGTGCACTGGGGATACAAAGAAACCAAGATTTTTCTGGGAATTCTCAGAG  1258

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1259  GCCTGGATCCACGAAAAACTCCGCACCTGCCATCGAAACCACCAGGTGTACCGGATTATGGCTGAGCAGCTGTG  1332

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1333  AGAACATGGCTTCCTGTGGACCCTGGAGCAATGTTGCTATCGGTTCAAAAACCTCCTGACCGACTACTGCAAAG  1406

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1407  CCAGGAGCACCTACACACCAGGCACCAGTGTCTTCTATGATGAGATGGATGCCCTGTTGAGTCTTGGGGCACTT  1480

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1481  TCTAACACCTTTGATGCCTTAGAGGTGGTAGGAGGCCTTCTTTGGGATTGAGAGGATTCCAAAGGGAACCAGGG  1554

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1555  CATAGCACTAGAAGATGTGGCGGGATGGTAATGAAATAGTGGAGGAGTCTCAAGAGGAATCCTGGAGGCTTGGT  1628

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1629  CCCCAGGCCTTGAGGTGGAATCCCAGTGGCAACTCTCCCCCACAATGGACCTCAGAGCAGTGGGAGCGACGCAG  1702

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1703  TCCTGTGGGAAGCATTCAGGCTCAGAATCAGGAGATGTGATTATTGTCCTGGCTCTGTTATGACTAATTTGGGT  1776

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1777  CTGGAATGGCCTCATCGGGGGAAAAATTGGTGACAACTTTAAGAAATACTGTTTATATCCCGTCCTCAAATATT  1850

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1851  GCTTGACTCAACCCTCTACTGAACCAGTAGTCCAGGGTGGCTCACAAAGACCACTTTGAGGCTCTTGCTCTGCT  1924

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1925  CTTTAGCCAAGGAGTCTCCCTTCCTGCCTTCAGTAACAACATTACAGGAAGAGAGGAGAGAAAGGTAGGAGTTA  1998

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 1999  AAGATCCAGTCATTTGTTTCCATCTAAAGTGCCCTATAAGCCGGGCATGGTGGCGCAAGCCTGTAGTCCCAGCT  2072

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2073  ACTCGGGAGGCTGGGGCAGGAGAATCACTTGAGCCCAGGAGTTGGAGGCCGCAGTGAGCTGTGATCATGCCACT  2146

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2147  GCATTCCAGCCTGGGCGACAGAGTGAGACCCAGACTCAGCTGAAAAATAATAATATTATTAAAAGAATTTAAAA  2220

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2221  TAAAGTGTTCCATAGATGTGAACCCTGCGTAGATTATACACACCAGTCTGCCATTTAAAAGGTTTGTTGTTCTT  2294

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2295  GGGCAACCTCTTTAAATACCCTTAGCCTCCATTTTCTCATCTGGACAGTGGACATTGTGATGGTTTCTACCTCC  2368

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2369  CTGGGCTGTTATGAGGATCCTGACACAGTATTAGCACTTGGCAAACGTTAGTTTTCATTATCATCATCATTATA  2442

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2443  ATTATTATGAAAATAGATAAGGGCATTATCCTGTACCCTCAAAGGAGTAAAAGGGGGAAAATGAGTCATTAAAC  2516

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2517  TTTCTCTTCTGGGAACTAGACCTTCTTGAGAGGCACTATCATTCTCATTTCACCTGTCACTTCCAGACATGGGA  2590

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2591  GCAGAAAGTGAATTTCAGAACTCCATGTCCCCTCCTGCTTTTCTCTGAGCAGGACTTCCAGTTCCCCAGCCAGA  2664

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2665  TGGGGTCACAATGCTGCAGAAAAGTGAAGAGCTTTGGAATGAAGATCTCCCGGACTTCAAGGAGATTCAGAAAA  2738

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2739  CGTCCAGTGCAGGTGGGAAATGAATGGGAGCTAGCATTCCACCAACAAAGTCAGCCCTGGGATTCTAAACTCGG  2812

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2813  ACAAGCCAGCACTGGTTAAGGGCTGAGGGGAACCAGGCACTCAGTGCACCCAGTTTACTATTCTGTGGTGTGGA  2886

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2887  AAGCACAGGACTTGAGAAGCAGGTGGCACCCAGGAAAGCCTGTTCCCCTAAGTAAGTTTGAACTTTAGTTACTT  2960

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 2961  GAAAAAAGGTATAACTGAATTATGAGTGTTTATGATTTTATCTTTATTTTATTTTTTTTGAGATGGAGTCTCAC  3034

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3035  CCTGTCACCCAGGCTGGAATGCAGTGGCACAATCTCGGTTCACTGCAGCCTCTACCTCTCAGGTTCAAGCAATT  3108

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3109  CTCCTGCCTCACCCTCCTGAGTAGTGGGGATTACAGGTGTGCCACCACCATGCCCGTCTCTAATTTTTATATTT  3182

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3183  TTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCCACCTT  3256

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3257  GGCCCCCCACAAAGTGCTGGGATTACAGGCGTGAGCCACTGTGCCTGGTCTATCTTTAAATTCCTATCTGAATT  3330

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3331  TGTTTAGGTTTTTTAAATAAAAATCTTTCTTTTTTTTTAGAGACAGGGGTTCACCATGGTGCCCAGGCTGATCT  3404

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3405  CGAACTCCTCCTGGACTCAAGCTATCCTCCCACCTCAGCCTCCCAAAGTACTGGGATTACAGACATGAGCCACA  3478

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3479  TGCTTGACCTGAATTTTAACTGCAGTTAATTATCACTTAACCAGCGAATTCACACAGGAGAAATCCCCTGGCCG  3552

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3553  GGCGCGGTGGCTCACACCTGTAATCCCAGCTCTTCGGGAGGCCGAGGTGGGTAGATCACAAGGTCAAGAGATCA  3626

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3627  AGACCATTCTGGCCAACATGGTGAAACTCCGTCTGTACCAAAAATACAAAAATTACCTGGGCATGGTGGTACGT  3700

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3701  GCCTGTAATCCCAGCTACTTGGCAGGCTGAGGCAGGAGCATTGCTTGAACCCATGAGGTGGAGGTTGCAGTGAG  3774

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3775  CCGAGATCACGCCACTGCACTCAAGCCTGGGTGACAGAGCAAGACTCCATCTCTACTACAAAAAAAAAAAAAAA  3848

Query  457  --------------------------------------------------------------------------  456
                                                                                      
Sbjct 3849  AAAAATTCAACCACCTTAGGAAGCCTCTCATTTATGTATTTCTAGCATGTAATTAGTGTTGCACATGGGAAGGG  3922

Query  457  -----------------------------  456
                                         
Sbjct 3923  CTAATAGATGCTGACAGAGTGAACAACTT  3951

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