Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10461
Subject:
NM_007767.3
Aligned Length:
2867
Identities:
2392
Gaps:
46

Alignment

Query    1  ATGGTGTTTACCCCGGAGGATAGATTGGGAAAGCAATGTCTGCTCCTCCCGCTTCTGCTCCTCGCAGCCTGGAA  74
            ||||..||||||.|.||.|...||.||||||..|..|||.||||.|||.||||.||||||||||||||||||.|
Sbjct    1  ATGGATTTTACCACTGAAGGCCGACTGGGAACACGGTGTATGCTGCTCTCGCTCCTGCTCCTCGCAGCCTGGGA  74

Query   75  GGTGGGGAGCGGCCAGCTCCACTACTCCGTACCCGAGGAGGCCAAACACGGCACCTTCGTGGGCCGGATCGCGC  148
            ||..||||||||||||||.||.||||||||.||.||||||||||||||||||||||||||||||||.|||||||
Sbjct   75  GGCAGGGAGCGGCCAGCTTCATTACTCCGTCCCAGAGGAGGCCAAACACGGCACCTTCGTGGGCCGCATCGCGC  148

Query  149  AGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCAGGATGGCCTCCAAAGACCGCGAGGACCTT  222
            ||||||||||||||||||||.|||||||||||||.||||||||||||.||||.|||||.|||||||.|||||||
Sbjct  149  AGGACCTGGGGCTGGAGCTGACGGAGCTGGTGCCCCGCCTGTTCAGGGTGGCGTCCAAGGACCGCGGGGACCTT  222

Query  223  CTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGCGAGGAGCTGTGCGGGCGGAG  296
            |||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||
Sbjct  223  CTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGGGAGGAGCTGTGCGGGCGGAG  296

Query  297  CGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTGGAGGTGA  370
            ||.||||||.|||||||||||||||||||||||||||||||||||||||||||||||.|||||.||||||||||
Sbjct  297  CGTGGAGTGTAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCACGTGGAGGTGGAGGTGA  370

Query  371  GGGACATTAACGACAACCCGCCCTTGTTCCCGGTAGAGGAACAAAGAGTGCTGATTTACGAATCTAGGCTGCCA  444
            ||||||||||.||.||||||||..|||||.|.|||.||||.||||||.||.|.|||||||||||||||||||||
Sbjct  371  GGGACATTAATGATAACCCGCCTGTGTTCTCAGTAAAGGAGCAAAGAATGTTAATTTACGAATCTAGGCTGCCA  444

Query  445  GATTCTGTGTTTCCACTGGAGGGCGCGTCCGATGCAGATGTTGGCTCAAATTCCATCTTAACCTATAAACTCAG  518
            ||||||.||||||||||.||||||||.||.|||||.||||||||.|.||||||.||.|||||||||||||||||
Sbjct  445  GATTCTTTGTTTCCACTAGAGGGCGCATCAGATGCTGATGTTGGATTAAATTCTATGTTAACCTATAAACTCAG  518

Query  519  TTCTAGCGAATACTTCGGGCTAGATGTGAAAATAAACAGTGATGACAATAAACAAATTGGGCTCTTATTAAAGA  592
            |.|.|||||||||||.|||||||||||||||..||||||.||||.|||.|||||||||.|.|||||.||.||.|
Sbjct  519  TCCCAGCGAATACTTTGGGCTAGATGTGAAATCAAACAGCGATGGCAACAAACAAATTAGACTCTTGTTGAAAA  592

Query  593  AATCCTTGGACAGAGAGGAAGCTCCTGCACACAACTTATTCCTGACAGCCACAGATGGGGGCAAACCTGAGCTC  666
            |||||||||||||||||||.|||||||..||.||..||.|.|||||||||||.|||||.|||||||||||||||
Sbjct  593  AATCCTTGGACAGAGAGGATGCTCCTGAGCATAAGCTACTGCTGACAGCCACGGATGGAGGCAAACCTGAGCTC  666

Query  667  ACAGGCACTGTTCAGCTGCTGGTCACAGTGCTGGATGTGAATGATAATGCTCCCACTTTCGAACAGTCTGAATA  740
            ||||||.|||||||||||||||||||.||||||||||||||||||||.||.||.||||||.|.||..||||.||
Sbjct  667  ACAGGCTCTGTTCAGCTGCTGGTCACTGTGCTGGATGTGAATGATAACGCCCCTACTTTCCAGCACCCTGAGTA  740

Query  741  CGAAGTAAGAATATTCGAAAATGCAGACAACGGAACAACAGTTATCAGACTGAATGCTTCTGATCGGGATGAAG  814
            .|||||.|||||.||.|||||..|||||||||||||.||||||||.|||||||||||||||||...||||||||
Sbjct  741  TGAAGTGAGAATCTTGGAAAACTCAGACAACGGAACGACAGTTATTAGACTGAATGCTTCTGACAAGGATGAAG  814

Query  815  GAGCGAATGGGGCAATTTCATATTCTTTTAATAGCCTTGTTGCAG-CCATGGTTATTGACCACTTTAGCATAGA  887
            |..|||||...||||||||.||.|||||||||||.| ||.|||.| |||.|..|.||||.||.|||||||||||
Sbjct  815  GGACGAATTCAGCAATTTCGTACTCTTTTAATAGAC-TGGTGCCGCCCAAGACTCTTGAGCAGTTTAGCATAGA  887

Query  888  TCGAAATACGGGAGAAATAGTGATTCGGGGTAATTTGGATTTTGAACAAGAAAACTTATACAAAATCCTCATTG  961
            |..|.||||.||||||||..|.|.||..||.||||||||.|||||.||||.|.|..|.||||||||||.|.|||
Sbjct  888  TGCAGATACAGGAGAAATCATAACTCAAGGAAATTTGGACTTTGAGCAAGTAGATGTCTACAAAATCCACGTTG  961

Query  962  ACGCCACGGACAAAGGCCATCCTCCCATGGCGGGTCATTGCACCGTTTTAGTGAGAATTTTGGATAAAAATGAT  1035
            |.||.|||||||||||.||.|||||.||||.|||.||||||||.||||||||||...|.||||||.|.||.||.
Sbjct  962  ATGCGACGGACAAAGGACACCCTCCGATGGTGGGCCATTGCACTGTTTTAGTGAAGGTATTGGATGAGAACGAC  1035

Query 1036  AACGTCCCTGAGATAGCAC--TGACTTCCTTATCCTTGCCTGTACGTGAAGACGCTCAATTTGGTACTGTCATC  1107
            ||.||.|||.||||  |||  ||||||||||||||.|||||||.||.||.||||||..|.|..||||||||||.
Sbjct 1036  AATGTGCCTCAGAT--CACTTTGACTTCCTTATCCCTGCCTGTTCGAGAGGACGCTGCACTGAGTACTGTCATT  1107

Query 1108  GCCCTAATTAGCGTGAACGACCTCGATTCAGGTGCCAACGGGCAGGTGAACTGCTCGCTGACGCCTCACGTCCC  1181
            ||.|||||||||||....||.||.||.||.||..|||||||||||||||.||||||.||||..|||||.|||||
Sbjct 1108  GCTCTAATTAGCGTTTCGGATCTGGACTCTGGATCCAACGGGCAGGTGACCTGCTCCCTGAGTCCTCATGTCCC  1181

Query 1182  TTTCAAGCTGGTGTCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGTGCCCTGGACCGCGAGAGCGTGT  1255
            .||||||.|||||||||||||||||||||||||.|||.|.|||.|||||||.|||||||||||.||||.|....
Sbjct 1182  CTTCAAGTTGGTGTCCACCTTCAAGAATTACTATTCGCTTGTGTTGGACAGCGCCCTGGACCGAGAGACCACAG  1255

Query 1256  CGGCCTATGAGTTGGTGGTGACCGCGCGGGACGGGGGCTCGCCTTCGCTGTGGGCCACAGCCAGCTTGTCTGTG  1329
            |.|.||||.||.||||||||||.||||||||||||||.||.|||||..|||||.||||.||.|||.||||||||
Sbjct 1256  CTGACTATCAGGTGGTGGTGACAGCGCGGGACGGGGGTTCTCCTTCTTTGTGGACCACGGCTAGCGTGTCTGTG  1329

Query 1330  GAGGTGGCCGACATGAATGACAATGCTCCGGCGTTCGCGCAGCCCGAGTACACAGTGTTCGTGAAGGAGAACAA  1403
            |||||||||||..||||.||||||||.||..|.||.||||||||.||.|||||.||||||||||||||||||||
Sbjct 1330  GAGGTGGCCGATGTGAACGACAATGCGCCTTCATTTGCGCAGCCTGATTACACGGTGTTCGTGAAGGAGAACAA  1403

Query 1404  CCCGCCGGGCTGC-CACATCTTCACGGTGTCTGCGCGAGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTAC  1476
            |||.||.|| .|| |||||||||||.||.||.|||...||||||||.|||||||||||||||||||||||||||
Sbjct 1404  CCCTCCTGG-AGCGCACATCTTCACAGTATCGGCGATGGACGCGGATGCGCAGGAGAACGCGCTGGTGTCCTAC  1476

Query 1477  TCGCTGGTGGAGCGGCGGGTGGGCGAGCGCGCGTTGTCGAGCTACATTTCGGTGCACGCGGAGAGCGGCAAGGT  1550
            |||||||||||||||.||||||||||||||..|.||||||||||..|.||.|||||||||||.|||||||||||
Sbjct 1477  TCGCTGGTGGAGCGGAGGGTGGGCGAGCGCTTGCTGTCGAGCTATGTGTCTGTGCACGCGGAAAGCGGCAAGGT  1550

Query 1551  GTACGCGCTGCAGCCGCTGGACCACGAGGAGCTAGAGCTGCTGCAGTTTCAGGTGAGCGCGCGCGACGCGGGCG  1624
            ||.|||.||||||||.||||||||.||||||||.||.|||||||||||.||||||||||||||.||.||.||.|
Sbjct 1551  GTTCGCTCTGCAGCCTCTGGACCATGAGGAGCTGGAACTGCTGCAGTTCCAGGTGAGCGCGCGGGATGCTGGTG  1624

Query 1625  TGCC-GCCTCTGGGCAGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCGCTGCT  1697
            |||| ||| |||||||||||.|||||.|||||||||||.||||||||.|||||||||||.|||||..|||||||
Sbjct 1625  TGCCTGCC-CTGGGCAGCAATGTGACTCTGCAGGTGTTTGTGCTGGATGAGAACGACAATGCGCCCACGCTGCT  1697

Query 1698  GGCGCCTCGGGTGG----GTGGTACTGGTGGTGCAGTGAGCGAGCTGGTGCCGCGGTCACTGGGTGCAGGCCAA  1767
            .|..|||    |||    ..||..|||||||||.|||||||||.||.|||.|.|..|||.|||||||.|||||.
Sbjct 1698  TGGACCT----TGGACACCAGGATCTGGTGGTGTAGTGAGCGAACTTGTGTCACCTTCAGTGGGTGCTGGCCAG  1767

Query 1768  GTGGTGGCGAAGGTGCGCGCAGTTGACGCCGACTCAGGCTACAACGCGTGGCTTTCGTATGAGCTGCAGCCCCC  1841
            |||||..|.||||||||.|||||.||.||.||.||.|||||.||.||.|||||.||.|||||||||||.||...
Sbjct 1768  GTGGTCACAAAGGTGCGTGCAGTAGATGCGGATTCTGGCTATAATGCCTGGCTGTCTTATGAGCTGCATCCTTT  1841

Query 1842  GGCAAGCAGCGCTCG----CTTCCCGTTTCGCGTGGGGCTGTACACGGGCGAGATCAGCACCACTCGTGTCCTG  1911
            .|||.|..|..|.||    ||    ||||.|.||.||.||||||||||||||||||||.|||||.||||.|||.
Sbjct 1842  AGCAGGTGGAACGCGGAGTCT----GTTTAGGGTAGGTCTGTACACGGGCGAGATCAGTACCACGCGTGCCCTT  1911

Query 1912  GACGAAGCGGACTCTCCGCGCCACCGGCTGCTGGTGCTGGTGAAAGACCACGGTGAGCCGGCGCTGACAGCGAC  1985
            ||.||.||.||..|.||.|||||.||.||..|.|||||||||||.||||||||.|||||.|||||||..||.||
Sbjct 1912  GAGGAGGCAGATGCACCACGCCATCGCCTATTAGTGCTGGTGAAGGACCACGGGGAGCCAGCGCTGATTGCCAC  1985

Query 1986  GGCCACGGTTCTGGTGTCGCTGGTGGAGAGTGGCCAGGCTCCAAAGGCGTCATCACGGGCGTC--GGTGGGCGC  2057
            .|||||.||..|.|||||.|||||.||||...|||||.|||||||.||.||.||.||.||| |  |||    ||
Sbjct 1986  AGCCACTGTGTTAGTGTCTCTGGTTGAGAACAGCCAGACTCCAAAAGCCTCTTCGCGAGCG-CAAGGT----GC  2054

Query 2058  CGCGGGCCCAGAGGCGGCGCTGGTGGATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTATCCAGCCTGC  2131
            |.|.||||..||.|...||.|.|||.||||||||||||||||||||||.||||||||.|||||.||||||||.|
Sbjct 2055  CACTGGCCAGGAAGTTTCGTTAGTGAATGTCAACGTGTACCTGATCATTGCCATCTGTGCGGTGTCCAGCCTAC  2128

Query 2132  TGGTCCTCACGCTACTGCTGTACACAGCGCTGCGGTGCTCGGCGCCACCCACCGAGGGCGCGTGCACGGCGGAC  2205
            |.||.||.||.||..||.|.|||||.||.|||||||||||.|..|||||.||.|||||.|.||||..|||.|..
Sbjct 2129  TAGTTCTAACCCTCATGGTATACACCGCACTGCGGTGCTCAGTTCCACCTACAGAGGGTGTGTGCGGGGCAGGG  2202

Query 2206  AAGCCCACGCTGGTGTGCTCCAGCGCAGTGGGGAGCTGGTCGTACTCGCAGCAGAGGCGGCAGAGGGTGTGCTC  2279
            |||||...||||||||||||.||.||.||.|||||||||||.|||||.|||||||||.|.||||.|||.||.||
Sbjct 2203  AAGCCTGTGCTGGTGTGCTCTAGTGCGGTAGGGAGCTGGTCCTACTCACAGCAGAGGAGACAGAAGGTTTGTTC  2276

Query 2280  CGGGGAGGGCCCACCCAAGATGGATCTCATGGCCTTTAGCCCCAGCCTTTCACCTTGTCCTATTATGATGGGTA  2353
            .||.|||||.||||||||.|..||||||||||||||.|||||.||.|||.|.||||||||..||   .||||| 
Sbjct 2277  TGGAGAGGGACCACCCAAAACCGATCTCATGGCCTTCAGCCCGAGTCTTCCTCCTTGTCCGGTT---GTGGGT-  2346

Query 2354  AGGCGGAGAATCAGGATTTAAATGAAGATCATGATGC-CAA-ACCACGACAGCCCAACCCTGACTGGCGTTACT  2425
                 |||.||||||||||.||.||.||||||  ||| ||| |||.||.||||||||||||||||||||.||||
Sbjct 2347  -----GAGCATCAGGATTTGAACGACGATCAT--TGCTCAAGACCCCGGCAGCCCAACCCTGACTGGCGCTACT  2413

Query 2426  CTGCCTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGA  2499
            |||||||.||.|||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||
Sbjct 2414  CTGCCTCGCTAAGAGCAGGCATGCACAGCTCTGTGCACCTGGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGA  2487

Query 2500  GGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGT  2573
            |||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||.|||||||||||.||
Sbjct 2488  GGGCCTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCTGAGGCAGGAGAGGTGTCCCCTCCGGT  2561

Query 2574  CGGTGCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTG  2647
            .||.||.|||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
Sbjct 2562  GGGCGCCGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAGTCCGGTCCCGGTG  2635

Query 2648  AGTTGCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAA  2721
            |||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||.||||
Sbjct 2636  AGTTGCCAGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTGCTAACAACCAA  2709

Query 2722  ATTGACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAA  2795
            |||||||||||.||.||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2710  ATTGACAAAAGCGATTTTATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAA  2783

Query 2796  CAAGACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACTAG  2850
            |||||||||||||||||||||||||||||||||||||||.||||||||||||.||
Sbjct 2784  CAAGACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACGGACAACAGTGACCAG  2838

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