Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10461
Subject:
NM_018900.3
Aligned Length:
2937
Identities:
2406
Gaps:
174

Alignment

Query    1  ATGGTGTTTACCCCGGAGGATA----GATTGGGAAAGCAATG--TCTGCTCCTCCCGCTTCTGCTCCTCGCAGC  68
            |||||||||.|    .||||.|    |..||||  |||...|  ||||||.||...||||||||||||||||||
Sbjct    1  ATGGTGTTTTC----TAGGAGAGGGGGCCTGGG--AGCCCGGGATCTGCTTCTTTGGCTTCTGCTCCTCGCAGC  68

Query   69  CTGGAAGGTGGGGAGCGGCCAGCTCCACTACTCCGTACCCGAGGAGGCCAAACACGGCACCTTCGTGGGCCGGA  142
            ||||.||||||||||||||||||||||||||||..|.||.|||||.||||||||||||||||||||.|||||..
Sbjct   69  CTGGGAGGTGGGGAGCGGCCAGCTCCACTACTCGATCCCGGAGGAAGCCAAACACGGCACCTTCGTTGGCCGCG  142

Query  143  TCGCGCAGGACCTGGGGCTGGAGCTGGCGGAGCTGGTGCCGCGCCTGTTCAGGATGGCCTCCAAAGAC-CGCGA  215
            |.||.|||||||||||.|||||||||||||||||||||||.|||||||||.||.||||.|||||| || |.|..
Sbjct  143  TTGCTCAGGACCTGGGACTGGAGCTGGCGGAGCTGGTGCCTCGCCTGTTCCGGGTGGCGTCCAAA-ACACACAG  215

Query  216  GGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGACCGCGAGGAGCTGTGCG  289
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||.
Sbjct  216  GGACCTTCTGGAGGTAAATCTGCAGAATGGCATTTTGTTTGTGAATTCTCGGATCGATCGCGAGGAGCTGTGCC  289

Query  290  GGCGGAGCGCGGAGTGCAGCATCCACCTGGAGGTGATCGTGGACAGGCCGCTGCAGGTTTTCCATGTGGACGTG  363
            .|.|||||||||||||||||||||||||||||.||||||..|||||||||||||||||||||||||||||.|||
Sbjct  290  AGTGGAGCGCGGAGTGCAGCATCCACCTGGAGTTGATCGCCGACAGGCCGCTGCAGGTTTTCCATGTGGAGGTG  363

Query  364  GAGGTGAGGGACATTAACGACAACCCGCCCTTGTTC-CCGGTAGAGGAACAAAGAGTGCTGATTTA----CGAA  432
            .||||||..|||||||||||.||.||.|||.|.||| ..||.||| |||||||.|.|    |||||    .|||
Sbjct  364  AAGGTGAAAGACATTAACGATAATCCACCCGTCTTCAGGGGCAGA-GAACAAATAAT----ATTTATTCCTGAA  432

Query  433  TCTAGGCTGCCAG-ATTCTGTG-TTTCCACTGGAGGGCGCGTCCGATGCAGATGTTGGCTCAAATTCCATCT--  502
            |||||.|| ||.| |||| |.| |||||..|.||.||.||..|.||||||||..||||..|.||  |..|||  
Sbjct  433  TCTAGACT-CCTGAATTC-GCGTTTTCCGATAGAAGGAGCTGCTGATGCAGACATTGGTGCTAA--CGCTCTTC  502

Query  503  TAACCTATAAACTCAGTTCTAGCGAATACTTCGGGCTAGATGTGAAAATAAAC-AGTGATGACAATAAACAAAT  575
            ||||.||.|..|||||..|.||.||.||.|||....|.|||||    |.|..| |||||||| |.|.|..||||
Sbjct  503  TAACGTACACGCTCAGCCCGAGTGATTATTTCTCTTTGGATGT----AGAGGCAAGTGATGA-ACTGAGTAAAT  571

Query  576  TGGGCTCTT--------ATTAAAGAAATCCTTGGACAGAGAGGAAGCTCCTGCACACAACTTATTCCTGACAGC  641
                |||||        |||.|..||||..|||||.|||||.|||.|.||.|.||...|||||||.|||||.||
Sbjct  572  ----CTCTTTGGCTTGAATTGAGAAAATATTTGGATAGAGAAGAAACACCAGAACTTCACTTATTACTGACTGC  641

Query  642  CACAGATGGGGGCAAACCTGAGCT-CACAGGCACTGTTCAGCTGCTGGTCACAGTGCTGGATGTGAATGATAAT  714
            |||.||||||||||||||.||||| || |||.||.|||.||||||||.||||.||.||.||.||.||||||||.
Sbjct  642  CACTGATGGGGGCAAACCGGAGCTGCA-AGGTACAGTTGAGCTGCTGATCACCGTCCTCGACGTTAATGATAAC  714

Query  715  GCTCCCACT-TTCGAACAGTCTGAATACGAAGTAAGAATATTCGAAAATGCAGACAACGGAACAACAGTTATCA  787
            || |||||| ||.||.|||.|.|.||||..|||.....|.||.||.|.|.|||..||.||||||..|||.|.||
Sbjct  715  GC-CCCACTGTTTGACCAGGCCGTATACAGAGTCCACTTGTTAGAGACTACAGCAAATGGAACATTAGTGACCA  787

Query  788  GACTGAATGCTTCTGATCGGGATGAAGGAGCGAATGGGGCAATTTCATATTCTTTTAATAGCCTTGTTG-CAGC  860
            .|.|.|||||.||||||...||.|||||.|..|||||.|.|     .|..||||||     |||  ||| ||| 
Sbjct  788  CATTAAATGCCTCTGATGCTGACGAAGGTGTAAATGGTGAA-----GTCGTCTTTT-----CCT--TTGACAG-  848

Query  861  CATGGTTAT------TGACCACTTTAGCATAGATCGAAAT----------ACGGGAGAAA-TAG--TGATTCGG  915
              ||| |||      ||| ||.|..||.|.|..||.||.|          .|.||||||| |||  |.|||   
Sbjct  849  --TGG-TATTTCTCGTGA-CATTCAAGAAAAATTCAAAGTTGATTCCAGCTCAGGAGAAATTAGGTTAATT---  915

Query  916  GGTAATTTGGATTTTGAACAAGAAAACTTATACAAAATCCT----CATTGACGCCACG------GACAAAGGCC  979
            |.|||..||||||.||||.||          ||||||||||    .|||.|.|..|.|      ||.|||||..
Sbjct  916  GATAAACTGGATTATGAAGAA----------ACAAAATCCTACGAAATTCAAGTAAAGGCAGTTGATAAAGGAA  979

Query  980  ATCCTCCCATGGCGGGTCATTGCACCGTTTTAGTGAGAATTTTGGATAAAAATGATAACG-TCCCTGAGATAGC  1052
            .||||||.|||.|...|||.||.|..|||||.||||.|.|..|||||..|||||||||.| |||       ||.
Sbjct  980  GTCCTCCGATGTCAAATCACTGTAAGGTTTTGGTGAAAGTGCTGGATGTAAATGATAATGCTCC-------AGA  1046

Query 1053  ACTG------ACTTCCTTATCCTTGCCTGTACGTGAAGACGCTCAATTTGGTACTGTCATCGCCCTAATTAGCG  1120
            ||||      |||||.||.|..||||||.|..|.||.|||||||.|.|..|.||.|||||||||||.||.|.||
Sbjct 1047  ACTGGCGGTCACTTCATTGTATTTGCCTATCAGAGAGGACGCTCCACTCAGCACCGTCATCGCCCTCATCACCG  1120

Query 1121  TGAACGACCTCGATTCAGGTGCCAACGGGCAGGTGAACTGCTCGCTGACGCCTCACGTCCCTTTCAAGCTGGTG  1194
            ||...||||..||.||||||||||||||||||||||..|||||..|.|.|||.||||||||.||||||||||||
Sbjct 1121  TGTCTGACCGTGACTCAGGTGCCAACGGGCAGGTGACTTGCTCCTTAATGCCCCACGTCCCCTTCAAGCTGGTG  1194

Query 1195  TCCACCTTCAAGAATTACTACTCGTTGGTGCTGGACAGTGCCCTGGACCGCGAGAGCGTGTCGGCCTATGAGTT  1268
            ||||||||||||||||||||||||||||||.|||||||.||||||||.|||||||||.||||||.|||||||.|
Sbjct 1195  TCCACCTTCAAGAATTACTACTCGTTGGTGTTGGACAGCGCCCTGGATCGCGAGAGCCTGTCGGTCTATGAGCT  1268

Query 1269  GGTGGTGACCGCGCGGGACGGGGGCTCGCCTTCGCTGTGGGCCACAGCCAGCTTGTCTGTGGAGGTGGCCGACA  1342
            |||||||||||||||||||||||||||||||||||||||||||||.|||||..||||.|||||||||||||||.
Sbjct 1269  GGTGGTGACCGCGCGGGACGGGGGCTCGCCTTCGCTGTGGGCCACGGCCAGGGTGTCCGTGGAGGTGGCCGACG  1342

Query 1343  TGAATGACAATGCTCCGGCGTTCGCGCAGCCCGAGTACACAGTGTTCGTGAAGGAGAACAACCCGCCGGGCTGC  1416
            ||||||||||.||.||.||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1343  TGAATGACAACGCGCCTGCGTTCGCGCAGCCCGAGTACACAGTATTCGTGAAGGAGAACAACCCGCCGGGCTGC  1416

Query 1417  CACATCTTCACGGTGTCTGCGCGAGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTACTCGCTGGTGGAGCG  1490
            |||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||.|||||||||||.||
Sbjct 1417  CACATCTTCACGGTGTCTGCGCGGGACGCGGACGCGCAGGAGAACGCGCTGGTGTCCTATTCGCTGGTGGAACG  1490

Query 1491  GCGGGTGGGCGAGCGCGCGTTGTCGAGCTACATTTCGGTGCACGCGGAGAGCGGCAAGGTGTACGCGCTGCAGC  1564
            |||||||||||||||||||.||||||.||||.|.||.|||||||||||||||||||||||||||||.|||||||
Sbjct 1491  GCGGGTGGGCGAGCGCGCGCTGTCGAACTACGTGTCAGTGCACGCGGAGAGCGGCAAGGTGTACGCACTGCAGC  1564

Query 1565  CGCTGGACCACGAGGAGCTAGAGCTGCTGCAGTTTCAGGTGAGCGCGCGCGACGCGGGCGTGCCGCCTCTGGGC  1638
            |.|||||||||||||||||.||||||||||||||.||||||||||||||.||.|||||||||||||||||||||
Sbjct 1565  CCCTGGACCACGAGGAGCTGGAGCTGCTGCAGTTCCAGGTGAGCGCGCGGGATGCGGGCGTGCCGCCTCTGGGC  1638

Query 1639  AGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCGCTGCTGGCGCCTCGGGTGGG  1712
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
Sbjct 1639  AGCAACGTGACGCTGCAGGTGTTCGTGCTGGACGAGAACGACAACGCGCCGGCGCTGCTGGCGCCTCGAGTGGG  1712

Query 1713  TGGTACTGGTGGTGCAGTGAGCGAGCTGGTGCCGCGGTCACTGGGTGCAGGCCAAGTGGTGGCGAAGGTGCGCG  1786
            |||.|||..|||||||||.||.||||||||||||||.|...|||||||.||.||.|||||||||||||||||||
Sbjct 1713  TGGCACTATTGGTGCAGTCAGTGAGCTGGTGCCGCGATTGGTGGGTGCGGGTCATGTGGTGGCGAAGGTGCGCG  1786

Query 1787  CAGTTGACGCCGACTCAGGCTACAACGCGTGGCTTTCGTATGAGCTGCAGCCCCCGGCAAGCAGCGCTCGCTTC  1860
            ||||.|||||||||||.|||||||||||||||||.||.|||||.||||||||..|.|||.||.||||.|||.||
Sbjct 1787  CAGTGGACGCCGACTCGGGCTACAACGCGTGGCTGTCCTATGAACTGCAGCCGGCAGCAGGCGGCGCGCGCATC  1860

Query 1861  CCGTTTCGCGTGGGGCTGTACACGGGCGAGATCAGCACCACTCGTGTCCTGGACGAAGCGGACTCTCCGCGCCA  1934
            |||||.||||||||||||||||||||||||||||||||.|||||||||||||||||.||.||||...|||||.|
Sbjct 1861  CCGTTCCGCGTGGGGCTGTACACGGGCGAGATCAGCACGACTCGTGTCCTGGACGAGGCTGACTTGTCGCGCTA  1934

Query 1935  CCGGCTGCTGGTGCTGGTGAAAGACCACGGTGAGCCGGCGCTGACAGCGACGGCCACGGTTCTGGTGTCGCTGG  2008
            |||.||.||||||||.|||||.||.|||||||||||||||||||||||.||||||||.||.||.||.||.||||
Sbjct 1935  CCGCCTTCTGGTGCTAGTGAAGGATCACGGTGAGCCGGCGCTGACAGCCACGGCCACTGTGCTTGTATCTCTGG  2008

Query 2009  TGGAGAGTGGCCAGGCTCCAAAGGCGTCATCACGGGCGTCGGTGGGCGCCGCGGGCCCAGAGGCGGCGCTGGTG  2082
            |||||||.||||||||.|||||||||||.||.||||||||||||||.|.|||||||||||||||||||||||||
Sbjct 2009  TGGAGAGCGGCCAGGCGCCAAAGGCGTCTTCGCGGGCGTCGGTGGGTGTCGCGGGCCCAGAGGCGGCGCTGGTG  2082

Query 2083  GATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTATCCAGCCTGCTGGTCCTCACGCTACTGCTGTACAC  2156
            ||||||||||||||||||||||||||||||||||||||.||||||||||||||.|||||.||.|||||||||||
Sbjct 2083  GATGTCAACGTGTACCTGATCATCGCCATCTGCGCGGTGTCCAGCCTGCTGGTGCTCACACTGCTGCTGTACAC  2156

Query 2157  AGCGCTGCGGTGCTCGGCGCCACCCACCGAGGGCGC----GTGCACGGCGGACAAGCCCACGCTGGTGTGCTCC  2226
            .||||||||||||||.|.|||.|||||.|||||.||    ||||    |||.|||||||||.||||||||||||
Sbjct 2157  GGCGCTGCGGTGCTCAGTGCCGCCCACTGAGGGTGCGTATGTGC----CGGGCAAGCCCACTCTGGTGTGCTCC  2226

Query 2227  AGCGCAGTGGGGAGCTGGTCGTACTCGCAGCAGAGGCGGCAGAGGGTGTGCTCCGGGGAGGGCCCACCCAAGAT  2300
            |||||..||||||||||||||.||||.||||||||||||||||||||||||||..|.||||||||||||||||.
Sbjct 2227  AGCGCGTTGGGGAGCTGGTCGAACTCACAGCAGAGGCGGCAGAGGGTGTGCTCTAGCGAGGGCCCACCCAAGAC  2300

Query 2301  GGATCTCATGGCCTTTAGCCCCAGCCTTTCACCTTGTCCTATTATGATGGGTAAGGCG-GAGAATCAGGATTTA  2373
            .||.|||||||||||.|||||..||||.||.||..|||            .|||..|| .||||  ||     |
Sbjct 2301  CGACCTCATGGCCTTCAGCCCAGGCCTATCTCCAAGTC------------TTAACACGTCAGAA--AG-----A  2355

Query 2374  AATGAA------------------GATCATGATGCCAAACCACGACAGCCCAACCCTGACTGGCGTTACTCTGC  2429
            ||||||                  ||||.|..||..||.|||||||||||||||||||||||||||||||||||
Sbjct 2356  AATGAACAACCAGAAGCAAATTTGGATCTTTCTGGTAATCCACGACAGCCCAACCCTGACTGGCGTTACTCTGC  2429

Query 2430  CTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGC  2503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2430  CTCCCTGAGAGCAGGCATGCACAGCTCTGTGCACCTAGAGGAGGCTGGCATTCTACGGGCTGGTCCAGGAGGGC  2503

Query 2504  CTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGT  2577
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2504  CTGATCAGCAGTGGCCAACAGTATCCAGTGCAACACCAGAACCAGAGGCAGGAGAAGTGTCCCCTCCAGTCGGT  2577

Query 2578  GCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTT  2651
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2578  GCGGGTGTCAACAGCAACAGCTGGACCTTTAAATACGGACCAGGCAACCCCAAACAATCCGGTCCCGGTGAGTT  2651

Query 2652  GCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTG  2725
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2652  GCCCGACAAATTCATTATCCCAGGATCTCCTGCAATCATCTCCATCCGGCAGGAGCCTACTAACAGCCAAATTG  2725

Query 2726  ACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAG  2799
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2726  ACAAAAGTGACTTCATAACCTTCGGCAAAAAGGAGGAGACCAAGAAAAAGAAGAAAAAGAAGAAGGGTAACAAG  2799

Query 2800  ACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACTAG  2850
            ||||||||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 2800  ACCCAGGAGAAAAAAGAGAAAGGGAACAGCACGACTGACAACAGTGACCAG  2850

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