Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10619
- Subject:
- XR_002956449.1
- Aligned Length:
- 4089
- Identities:
- 200
- Gaps:
- 3871
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GACTGCGTTTTTTTTCCGAACGCCCGCAGCAGGGTCAGAAGGGAGGTGGTCGCCCTCCGTCGTGGTCTGGCGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATTCCGAGCCTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTGGCGGTTTCCGAGCGTTGGTGTCTTGGCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TTTCCGACCGTTGGTGTCTGGCGGTTTCCGACCGTTGGTGTCTGGCACGCGCCACCCTCTCTTGCTTTGGTTGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCATGCCGATGTACCAGACAAGAAGACAAGAAAATGATTTGAGGACAGCTTCAATCGCGGTGTGAAGAAGAAA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCAGCAAAACGACCACTGAAAACAACGCCGCACCGAGAAGTCCGCGTGAAGTGCGTGAAGGCTCTGAAAGGGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTACGGTAACCGGGACCTGACCGCACGCCTGGAGCTCTTCACTGGCCGCTTCAAGGACTGGATGGTTTCCATGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCATGGACAGAGAGTACAGTGTGGCAGTGGAGGCCGTCAGATTACTGATACTTATCCTTAAGAACATGGAAGGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGCTGATGGACGTGGACTGTGAGAGCGTCTACCCCATTGTGTAGGCCTCTAATTGAGGCCTGGCCTCTGCTGT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGGTGAATTTCTGTACTGGAAACTTTTCTACCCTGAGTGCGAGATAAGAACGATGGGTGGAAGAGAGCAACGCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGCCCAGGTGCCCAGAGGACTTTCTTCCAGCTTCTGCTGTCCTTCTTTGTGGAGAGCAAGCAAATCGCAGTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTCTCCAGGCTGACAAGGCGAAGGGCATGGCTTCGAAGTGCAAAAGAGTCATCATGAAACATCATGAATCATGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ATCATTAGGCGTCTTCCCTTCGCTCCCCACTTTTTTTTTTTTTTTTTTGAGACTGAGTCTCGCTCTGTTGCCCA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GGCTGGAGTACAGTGGTGCGATCTTGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCGTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCCTCCTGAGTAGCTGGGATTACAGGTCCCCGCCACCACACCTGGCTAATTTTCTTATTTATTTATTTATTTTT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTAGAGATGGGGTTTTGCCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTCAAGTGATCCACCTGCTTTGG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTCCCAAAGTGCTGGGATTACAGGCGTAAGCCATTGCACCCAACTCACTCCCCACCTTAAAACCAAAAGCGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTGGCTCTCAATGGAGACATCAAGCCCTCCCTGCCCCTTCTCCCTCCCCTTTCAGAGAATCTCCAGGAATTTCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCCATTGTGCAGGGAGCAATTGAAAAATCAGTTAGTTCAGCTGGGTGCAGTGGCTCATGTCTGTAATCCCAGCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTTTGGGAGGCTGAGGCGGGCAGATCACCTGAGGCCAGGAGTTGGAGACCAGCCTGGCCAGCACAGTGAAACCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGTCTCTACTAAAAATACAAAAAATTAGCCGGGCGTGGTGATGGGCACCTGTAATCCCAGCTACTCTGGAGGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAGGCAGGAGAATGGCGTGAACCTGGGAGGTGGAGCTTGCAGTGAGCCGAGACTGCAGCATTGCACTCCAGCCT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCGCAACAAGAGTGAAACTGTCTCAAAAAACAAAACAAAACAAAACACAAAAAGAAAGAAAAAAGGAAAAATCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTTAGTTCGATTATTAGAAGACTAGATTATTGCTCAGCAGTAACCACTCCTTTCCCACAAACTCCCCTCTCTAG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGGAATGTACCTCCCCACCCATTCCTGTTAGGCTTGGCCAGGTGAATCGCTTTGGCCAATAGAATGTAACTGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CAAGGTGAGCAGAGATTTGCAGTGGGCTTGTGCTTGGTGCTGGTCCTCCGGGGCTCCTGCCTTTAGCCAGGGGA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGCACACTCCCCAGCCCCTCCTTAGCCCTCTGGCCCTGGGGAGAATGAGAGGCATGTGGCACAGTCCTGGACCC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AGCCGTGGCTGGGAGCAAGCCTGGAAGCTTGAGCGAGAGATAAATGCTTGGTCTTTTTGTTTGAGACTAAGTCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CGCTCTATCGCCCAGGCTGGAGTGCAGTGTGGCACAATCTCAGCTCATTGCAACCTCCACCTCCCAGGTTCAAG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTATTCTCCTGCTTCAGCCTCCCAAGTAGCTGGGACTACAGCCAAATTGGAAGACCCACTTCTCTGGACTGGAT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GCTGCATTGAATTGAGCAAAGGAACTGAGTGCCCGGGGAGCTCAAAGGGAAGCAGCCCAGCCTTCCTTCCGGGG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CAGAGCAGTGGTGGGGACCTGTTTCCAGCTGCTTGTGCCCCCCACTTCATGGAGGAGGGACCAGGGATCCTCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AGGAGAGGGTGATGTTTGACAGTGGCTGCCTGCCCTGAAAATCGCCCTTGTCTGTCCAGCCTGGCCTGAATTTC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACCCACATCAACCCACATGGGATACTTTATTTATTTATTTATCTATTTATTTATTTATTTATTTATTTTAGAGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGGGTCTCACCCTGTGGCCCAGGCTGGAGTGCCGTGGTGCTATCATAGCTCACTGCAGCCTCAAACTCCTGGG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTCAAGTGATCCTCCCGCCTCAGCCTCCAGAGTAGCTGGGACTACAGGAACACACCACTGTGCCTGGCTTATTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTCTTTTTTTTTTTGGTAGAGATGGGGGTCTCTCTATGTTGCCCAGGCTGGTCTCAAACTCCTGGCCTCAAGTG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 ATCCTCCTGCCTCGGCCTCCCAAAGTACTGGGATTACAGAATCGGCTCCCAGACACCTGCCACTCGTGAATGCA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCTGATAAACTCACTCACACTGAGGCCTTGGGGACTGAGAGTGCGATGACATGGATCCTGCGGACAAACCGCCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CAGGGCGTACCTAGCACCGAAGCATCAGGCGCCACTAGGTCTCCAGCTCCTTCTCGGATGACGTCCTTCAGCAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCCCGGTCCCCCGAGATGTCCAGCATCCTCTGACTTAACCGCTCGTACAGGGACTGATGGAGAATGAAAGCCA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GGCCTCAGAGCCGCAGACCCACCCGGCCACCCCTCAGCGTCTACGCCCCCACGTCTGGGCCCTCACCTGGCCGG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGGCGTCGTCCCCTTCCAGGACTCCCTGGTTTAACGCGCTTCCCCCCATGTCCTAGCTGCCCTCCCTGTGGCGT 3108
Query 1 ----------------------------------------------------------------------ATGC 4
||||
Sbjct 3109 GAGCCTTCGGCCTGGTGCGCCCCGCTGCCCTTCCTGGCTGTGACTCTGGTGGGGTTCCGAAGGCCCCTTTATGC 3182
Query 5 CCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGC 78
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3183 CCGGCAGACCCCTACCGACGGCGGCATTCCATTCTGGGGCCACGAGGAGGCACTCATCGTTTCGTTCCAACCGC 3256
Query 79 CGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACG---------GTGAGTTGCCAGG-TG 142
||||||||||||||||||||||||||||||||||||||||||||||||| .|||| .||||| ||
Sbjct 3257 CGCCAACGGCCCTGGCCCTCGCGAGCTCTGGAACTACAGAGGTCGCACGAGGCTCGCTCTGAG--CCCAGGCTG 3328
Query 143 -----------TGGCCCGTAATCGGAGC-----------------------GCACAAAACAT------------ 170
||| |||..||| ||.|||.|.||
Sbjct 3329 GAGTTCAGTGATGG------ATCTCAGCTCACTGCAGCCGCCACCTCCTGGGCTCAAGAGATCCTCCTGCCTCG 3396
Query 171 ------------GATGGG-----ACACGTAACGGGACCACACAGGGCACATTGGGC------------------ 209
|.|||| |.|||| |.||||| || |||.|| ||
Sbjct 3397 GCCTCCCAAGTAGCTGGGATTACAGACGT----GCACCAC-CA-GGCCCA----GCTAATTTATTTTTTAGTTT 3460
Query 210 ---ACTTGCAGG---------------------GGCGCGAGG---------------TGGCGGCACG------- 237
|.||||.|| .|| |.||| ||||..||.|
Sbjct 3461 TTAATTTGCTGGTAAGATGGTTTGTAGCTTTGTTGC-CTAGGCTGGTCTTGAACTCCTGGCTTCAAGCGATCCT 3533
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3534 CCAGTCTTGACCTCCCAAAGTGCTGGGATTATAGGCGTAGGCTACAGCCAACTTTCAATACTGCCCCATTGGGG 3607
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3608 GTTACGTTTCCAACACATGAAATTAGGAGGATACATTCAAACCACAGCAGTATATTATGACCATAATATTCATT 3681
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3682 AACTGTGTAACAGGCTGGGCGCGGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGACCAGAGTGGGTAGATC 3755
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3756 ACTCGAGGTCAGGAGTTTGAGACCAGCCTGGCCCACATGATGAAACCGCCTCTCTACTAAAAATACAAAAAATT 3829
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3830 AGCCGGTGTGGTGGCAGGCGCCTGTAACCTCAGCTACTTGGGAGGCTGAGGCAGGAGAATCACTTGAATCCGGG 3903
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3904 AGGTGGAGGTGGCAGTGAGCCTGATTGCACCACTGCACTCCAGCCTGGGCAACAAGAGCAAAACTCTGTCTCAA 3977
Query 238 -------------------------------------------------------------------------- 237
Sbjct 3978 TAAACAAACAAACAAACAAAACCTGTATAACAGAGTGTCATTGAATTTCTAAACGTTGAAAGACTTCACATTAA 4051
Query 238 ------------------- 237
Sbjct 4052 AAAAAAACTCACAATTTAA 4070