Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- NR_077240.1
- Aligned Length:
- 2960
- Identities:
- 216
- Gaps:
- 2711
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TATATTTGATTCCCTCTTGCAATATGTGCTTTTGATCATGAAACTGCTGAGAAAAGGCTCCTTCTAAACCACAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AACAAGGTTGCTGCTGGTGCTGGGGCCCGAGGAGGTCCGCGCCGGAGGAGGGCCACAGGGACTGAGCGAGTGAC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACGCACCACCCGTCAATGCTGCAACCCTGTAAGGCCTCCATGGACTCTCTACGTGAGTGTAGAATGAATCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGACTCAAACACAGCAGCTATTCCACATGCAGTGGAAGATATTCAAGGAGACGACAGATGGATATCTCAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CAACAGATTTGTCCTGGATGGAGAGGGCTCTGCAAAGATCTGCAGAGCCCTCTATGAACTGATCATGCAGCTGA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGAGGAACACCCAAGGAGAGAAACAAACCACCATTGCCTGACTGGCTCCCATCAGCGTTAATCTCTTCCCAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TTCCTTGATCAGTTATGCCACTGGCACTACAGAATCCATCTCTTTCTCAAAGCACTTTGCATTGCAAAATGTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTGGATGTTCAGCTCTAGTGTTTGAAAGGGTGGAGGGATTTACACTGGCCTTGCACGTAGAAGGTTTATTAGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACAGGAGAAAAAATAGCCTAGGAAGATTGTTGTTTAAATTTATCTGAAACCAGAAGGAGACTTTTTAGTTGTAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GTGTGATGCATTTGTTGAATTATCACTGTTTTTCCTAGGACAATATCAAGTCCAAGAACTGACCGATATGAAGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTTTTTTCTTGGCCTTGCTTTCTATGGGTTATGTCATATGTAATAATTATCAGAATCACACCTACTTGGCTTA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAACAGATTTTTATTTTAATTTTTAAAGCTCATAATTTAACCTTTTTTCTTGTTTTGCTTTATTCATATATAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTCAATATTTTCTTAACATGCAGCAACAGATTGAACATGCTTGCCATTCAAATATGAGAGATGCTATAGTTAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AAAGGAATTTGTTCCACTTTCTTAATCCTTCCTATGCATAGCAGTGAAAAACAAATTTTGCCCCATGCAGGGAA 1036
Query 1 -------------------------------------------------ATGGAGTCTCGCTCTGTTGCCCAGG 25
|||||.||||..|||||||||||||
Sbjct 1037 CCCTTTGGAAGGTTTTTTGGTTTTGTTTGTTTGTTTGTTTTTTGTTTAGATGGATTCTCATTCTGTTGCCCAGG 1110
Query 26 CTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGC 99
||||||||||.|.||.||||||||||||||||||||||||||||||..|||||||||||||||.||||||||||
Sbjct 1111 CTGGAGTGCAATAGCATGATCTCGGCTCACTGCAACCTCTGCCTCCTTGGTTCAAGCGATTCTCCTGCCTCAGC 1184
Query 100 CTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA---TTTTGTATTTTTGGTCGAGACGGG 170
||||.||.|||||.|||.||.||.|...||||||||||||.|||||| ||||||.|||||.||.|..|||||
Sbjct 1185 CTCCGGAATAGCTAGGATTACAGGCCCCCACCACCACGCCTGGCTAATTTTTTTGTGTTTTTAGTAGCAACGGG 1258
Query 171 GTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTG 243
|||||.|||||||.|||||||||.|||.|||||||||||||||.|||||||| ||||.||||||||||||||.|
Sbjct 1259 GTTTTACCATGTTGGTCAGGCTGATCTCGAACTCCTGACCTCAGGTGATCCACCCACTTCGGCCTCCCAAAGCG 1332
Query 244 TTGAGA-------------------------------------------------------------------- 249
.||.||
Sbjct 1333 CTGGGACTACAGGCGTGAGCCACCGCAGTCAGCTGGAAGGTATCATTTTTATGTTGCTAAATATCATGTCTATC 1406
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1407 ATAAACCTATGCCTGCAGCCTTTCCTCTTCTCTGAAGTATAAGCCCCCCTTACTCTCATGATATTACCAATGTA 1480
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1481 GAACTCATTCTTGTGTGGTATTCTGCACTATAGAGTCTGCGTAGTGTTCTGGTATGTTCTGGTATGTTTTGTTT 1554
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1555 GCTTTTCCCTGAAAATCTGCTATAGTTTCCTTTTTTTGGAAAAAAAAAACAACAAAAACCTCTGCTTTCCATTC 1628
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1629 CATACTACCTGCCATTATTTCAAGTTTTATAATATCCCAAGGTGTACATTTTATTTTTTTTTAATTGACTTTGT 1702
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1703 TTTTAAATAAAGCAGTCCAGAAAATTTGGTCTTTTCCCGGGAGGAAACAAATGAAGCTGCTCTTCAGAATAGCC 1776
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1777 ATTCTGCTTTTATCCCACCAGTTCAGTAAAAAAGAACTAGATTTGTTTAACTTTTAAGGTTTCTCATTAACGTA 1850
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1851 CCTTCACCTGAAAATTTCCTTCAAGAGAGCTCTTTATAATCTTAATGTTTGCTTGGGCAACAAGAACTGCCATG 1924
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1925 TAAAAATAAATAATGGGACGATAGATGGCATATTGTTCAATATACCTGCGGAATATGTATAAACTGGATGTACA 1998
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1999 GACAGATATTTTGAACTAGACCAGGTGGGTATTGAAGTAACCCAACAAAATGTGATCTGCAGTGATTCTGCTTA 2072
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2073 ATGTTCAAATTCAACAGCTAAGGTATATGTTTTATGTTCTGCTCGCAAGGCAAATGGCAGTACTTTTGTGTGCT 2146
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2147 GGAGGAGAGGTTGCTGATTGGTGCCAAGACCCACTTCTGATTGAGAGGGATAAAAGTTGGGCTGAATTTTCTCT 2220
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2221 AGTCAAGACTCCTTCTAGATTTTTTTTTTTGTCTTTAAAAATACATACTTTAAAAATGTATCATGTCTTCATTA 2294
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2295 ATAACAGAAAATACACATGGTGCTCACTAAATTTGTTTACTACATTAAAATTTCCTTTTTGTTTTTAGTAGTCC 2368
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2369 AGGTTCTTGAGTTTTTTCAAGGCAGAATTTTTTTATTTTATTTTATTTTTAGCTGAGGTACAGTTGTATAGGAA 2442
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2443 GGAGAATTAAGCCAGAATTTGGTGTGTGCAAAGACAATTTCCTATCCAGGTCTTTTTCTGTCAGAGAGTGAGAG 2516
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2517 TTTTGTCCAAATGAACCCATTAGGTTACTACTGAGCATGCGATTTTAGCTTTTCTTTTCACGGAGGATCAAATA 2590
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2591 TCCCTTTGTGAGCTGAGCTTCCACTTGTTTGCTTATGTATGTAAACTTCAGATATCACTATATTCTATATCTAC 2664
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2665 CACAGCTATTCAGGCAACAGTATTCTAATAGCTAGCCTTTAAATAAAAATCTGCCTCATTACTAATGTTCAAAA 2738
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2739 AAACAAAGATAAAAATAGGTCTAATCCTAGGTAGAAAAGGTGTTTTTCCATACATCAAGATTTATAGAAAAGGA 2812
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2813 GATTCAGAGTCATGCTAAGACAGAATTTCAATGCTTACATTGTTCTCCTCAAAGATAAATTCATTCATCTAACC 2886
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2887 ATCTTACAGAGTAATCTTTGTTTTTGTTTGGTTCTTTCCATTAAAAAAATTAAGATCGAAAAAAAAAAAAAAAA 2960
