Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10792
Subject:
NR_103777.1
Aligned Length:
2464
Identities:
212
Gaps:
2223

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GGGCCAGACGCAGCCGAGTATCTTGAGGAGAAGGACTTTAAAGCGTTCAGGGATTTTAGCTGCCGCTGTGGAGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCCGCCGCTGTTCTTCCGCTGGAGGGCGCAGTAGTTCCTTAAGAGGGAATGGTGCGGCGAATAGCTGTGAGTTC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AAAGTCCTGACTACAGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCGCAAC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTCTGCTTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAGGCATGTGCCACCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCCCAGACAGAATCTTGCCCTATCACCCAGGCTGTAGTGCCGTGGTATAATCTTGGCTCGCCGCAACCTCCGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CTCCTGGGTTCAAGCCATTCTCCTGCTTCAGCCTCCTGAGTAGCTGTGACTACAGGCGTGCACCACCACACCTG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GCTAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATATTGGCCAGGCTGGTCTTGAACTCCTGACCTCAA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTGATTCACCCGCCTGGGCCTTCCAAAGTGCTGGGATTACAGGCATGAGCCACTGTGCCCGACCATAACTCTAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CATTTTATCATCAAGAAATGCTTGCTATATGTATACATACATTAGATTCACAGCCTGCATAAGAGTTTGTGTGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTCTTACTTAGTAAATACTGAGTGGTAAGGACAATTCCAAATTCATCCCATGAAAGTTAATAGGGAATTCCTA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCAGGTCATAGGTCAGATAGAAAATCTGTCCTTCATGAAACGCTGAGGACGTGCAATTCCAATTAAACCCACTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AATCTGGAGAAAGAAATCAAAGGGAGGGGGTGGGCCTGGAAAGAGTACATCTTATCTTCAGGTACTGTTTGTTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GATTTTTTTTAATACTTGGGGTTTGTTTCTGGGAAGAATTCTTGACCTGGCAAAAATTCATAGTAATTACTCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGGAAAGGAAAAAGAAGAAACAAACAAACAAAAAATACATTAATGTGGTTGGAAAAAAAATCTAAGAACATGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GTTGGTGGGAGAGAAGACTAAATGTTTGTGGAAGACCCACCCAAGTGCTTTTGATGTTTGACCAGTTATTATCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TATTGTTCTTCCTGCTATAGATACAGCTGCAATTTATGTAACAGGATGTTTAAAAAGATTAAAGAGAATCTGTA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTAGGGTTCTGAGATGATAAGAGTCCCTAGAATATGCATTTATGGACGTTTAGAATATAAGTTCCTGTACATTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  TTAGAATAAACCATCTATTTGTTTCCTTTTTTAAAAAAGAAACAAACAAAATTTGTATTTCAGTATGGCTGCTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCTTCCAGCAAGTGATATGGAATAACAGGCAAAGACAGCAAACCAATAACAGAGCAAAGACAAGTTGGTGCTGG  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TTCAAACTGTGGCCCATGCCGGTTCTTAATTAGCTTTGAGCTTTGAGTCTAAAATGTTTTAACTCTACATTATA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CACGTGTTTGGAATTTATTTGGATTCAACCTGTTCATCAGAAAATGGGTTATTCTATGATACAAGCAGGATCAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  TGTGTGAAATTTATGACTGCAATCACCCAACGTGAAGATGAAAGTTTAAACATTTTTTTGCTAGAGGAGTTTTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  AAAAAAAAAAAAAAAAAGTGTTCTATAGATGTCCCAAACATACAGAGTGACTTACTGGCGTTTAAGTCTTTCTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CCATGTGGAGTGCTATCTTAAGTGATAAATTGGCACTGGGCACTTGATAAAAGGTCATTGGGCATATTCTCCAA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GTTTCTGGTGTTAGTCATGAATTAATTGCTTGTTAACTTTAATTCTCCTAGCAACCTAGGCTAATACCTACTGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ACACTTGCTCTCTCTCTCTCACTGTATTTCTGTGCATGTGTATGTGCATAATTTTTTTCTGAACTTGTTTCTGT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TTGATAATAACTTACAGACATGATGCCCCTTTCCATTAAGCACTTCAGTGGATATTTTCTTTTCTTTGTTTTTT  1998

Query    1  --------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAA  60
                          |..||||.|.|||||||..|||||||||||||||||||||.|||||||..||||||||||
Sbjct 1999  TTTTTTTTTTTGAGACAGAGTTTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGCGTGATCTCAACTCACTGCAA  2072

Query   61  CCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCA----C  130
            |||||||||||..|.|||.|||.|||||.|||||||||||||||| ||||||||||||    |||||||    |
Sbjct 2073  CCTCTGCCTCCTGGATTCCAGCTATTCTCCTGCCTCAGCCTCCAG-GTAGCTGGGACT----ACATGCATATGC  2141

Query  131  CACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTC  204
            |||||.||||.|||||||||||||||||.||.|||||.||||||..|||||||.|.|||||||||||..|||||
Sbjct 2142  CACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACAGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTC  2215

Query  205  CTGACCTCAAGTGATC--CACCACCTCGGCCTCCCAAAGTGTTGAGA---------------------------  249
            ||||||||  ||||||  | ||.||||||||||||||||||.||.||                           
Sbjct 2216  CTGACCTC--GTGATCTGC-CCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGAGTGAGCCACCACGCCCCGC  2286

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2287  CAGTGTATATTTTCTAAAAACAAGGATATTCTCTTTCATAACCACAATTATAAAAATTAAGAAATCAATATTGA  2360

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2361  TTCAATAATATTTTCTAACCTACAGACCTCATTTGAATTTGCTCAAATGTTCCAATAATGTCCATTATGGTAAA  2434

Query  250  ----------------------  249
                                  
Sbjct 2435  ATAAATTCTATATCATACATTG  2456

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