Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- NR_109965.1
- Aligned Length:
- 1936
- Identities:
- 218
- Gaps:
- 1691
Alignment
Query 1 ------------------------------------------------------------------------AT 2
|.
Sbjct 1 AAATGAATTTTTGGGATGGTACAAGGTAAGAGTCAATGTTCCCTCTCTCTCTCTCCTTTTTTTTTTTTTAAGAC 74
Query 3 GGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGT 76
|||||||.|.|||||||.|||||||||||||||.||||...|||||||.|||||||||||||.|||||||||||
Sbjct 75 GGAGTCTTGTTCTGTTGGCCAGGCTGGAGTGCACTGGCACAATCTCGGTTCACTGCAACCTCCGCCTCCCAGGT 148
Query 77 TCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCA--CCACCACGCCCGGCTAA-T 147
||||||||||||.||||||||||||||.|.||||||||||.||.||.| ||| |||||||||||.||||| |
Sbjct 149 TCAAGCGATTCTCCTGCCTCAGCCTCCTGCGTAGCTGGGATTACAGGC--GCACGCCACCACGCCCAGCTAATT 220
Query 148 TTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGT----CAGGCTGGTCTTGAACTCCTGACCTCAAGTG 217
|||||||||||.||.||||||||||||..|||||||.|| ||||.||||||.||.||||||||.|| |||
Sbjct 221 TTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGTTGGCCAGGATGGTCTCGATCTCCTGACTTC--GTG 292
Query 218 ATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA----------------------------------------- 249
||||| ||||||||||||||||||||||||.||
Sbjct 293 ATCCACCCACCTCGGCCTCCCAAAGTGTTGGGATTACAGGCGTGAGACACTGCACCCAGCCCTCTCTTAATTTT 366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 367 TTTAACATACAGATAGCCAGTTCTTTCCTGATTTGTAAGTTTTTATTTAAACCAGAGTTAGAAAAATAATTAAA 440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 441 ATAACACTACCTCTAAACACTCAAAACCACTGCTATGACATAATCCTGCCATTTCAGTAGAACAGAAAATCCCC 514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 515 ACGCCTTCCCCTCAGCTCGGAGGGCACAGGACTGGGCAGCAAGCTCCACCAGTTTGTAGAAGGAGTTCAACTTC 588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 589 CAGACAGCAGGGAAATGCCTTTCTCTGAAGTTATTACATGAGTTCACACTGAAGGGAAAGAAGAAAGTGAGCCT 662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 663 TATCATTTTCCCAAGATGCTGTGAGATGTGTTGGATTTACTCTCACTCATAATTGTGCAGGATGGTTGTTTTGT 736
Query 250 -------------------------------------------------------------------------- 249
Sbjct 737 TTTGTTTTGAGGCAGGGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGTGTGGTCTCAATTCACTGCAACCT 810
Query 250 -------------------------------------------------------------------------- 249
Sbjct 811 CTGCCTCCAGGGTTCAAGCAATTCTCCTGCCTCCGCCTCCCGAGTAGCTAGAGTCACAGGTGTGCACCACCATG 884
Query 250 -------------------------------------------------------------------------- 249
Sbjct 885 CCTTGCTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCATCATGTTGGCCAGGCTGGACTCCAACTCCTGACC 958
Query 250 -------------------------------------------------------------------------- 249
Sbjct 959 TGAAGTGATCCGCCCCCCTCAACCTCCCAAAGTGCTGGGATTACAGACGTGAGCCACTGTGCCTAGCCACAGGT 1032
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1033 ATGTTCGGGATGGTTTCAACCAACATCAATAGAACCAACTAAGAATAGATGGCCTTCAGCAACACAGAGGGGTA 1106
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1107 GCACAGGAGTTCCAAAGATCAGTAGTTTGAAAATCAGGTCACAGGGAGTCCACGCTATATGATCTTGGGGTCTC 1180
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1181 ACTTTGTGGCCCAGCTGGAATACCGTGGTGCAAACACGGTTCACTGCAGCCTTGACCTCCCAAATTCAAAGATG 1254
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1255 AGGTTTCACCATGTTGCCTAGGCTGGTCTCAAACTTCTGACATCAAGCAATCTGCCCACCCTGGCCTCCCAAAG 1328
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1329 TGTTGGGATTACAGCTGTGAGCCACTGCACCCGGCAAATAATCTTTTTAAAACAGATTGTGATTCCGCAGGTCT 1402
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1403 GAGGTGGCGTCTGAGATTCTGCATTCCTAATAGGCTTCCAGAGACAGCATCTCACCATGATGCCCGACTAGCCT 1476
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1477 TGAACTCCTGGCTTCAAGTGATCCTCCCCATTCGGCCTCCCAAAGCGCTGGGATTATAGGTGTGAGCCACCATA 1550
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1551 ACAGGCCCAAAAGTAACATCTGATCAAAAATCTCAAGGTGATGCGGGAACAAGCCATGAGGCTACTCAGGGAAA 1624
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1625 CGTGCTCTAAATAGAAGGAATAACAAGTACAAAAGCCCTGATATGCGAGCTAAGGTGCTCAGGGACAACAAACA 1698
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1699 AAGCCAATATGGTTGGGGTAAAACAAGCAAGGGAGAGAAGAGAAGCAGATAAAATAAGAGTTACAAAGCAGTTC 1772
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1773 ATGTGGGACTTTGTAGACGAGTATAAGGACTGTGGCTTTTTCAGTGAATGAGAATAACTGGCAGGTTCTGAGCA 1846
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1847 AGGAGGGATATGACCTGATTAATTTTAAATGGATAATGTAATCGTGTTTAAACTCAAAAAGCTGAATTAAACAC 1920
Query 250 ------------ 249
Sbjct 1921 CTGTTCCATCTC 1932
