Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- NR_146295.2
- Aligned Length:
- 4893
- Identities:
- 217
- Gaps:
- 4645
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAGCCCCAGCTTTCACAGCCATCGCT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGGCAGGTCAGCGCTGCCTGCCAACGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGGCGATCTCTACGTGGGGAAGACCAGC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCACCATTGGGGTGGACTTTGAAATTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACAGCTGGGCAGGAGAAGTTCAAGTGCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAGAAGGACCTTCTGGGGCCGCATGTGAGCAGGCCGAAGCAGACGCTGTGCACCTGGCCAGGGAGATGCAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CGAGTACTGGTCAGTGTCGGCCAAGACTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAGCCGCCCTGGCAT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAATGGAGACCTAATC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTGCTAACTGGGGCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGGAGACTGGAGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCACCGGGCTCAGCTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTGGGAGCCCCACAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATCAGACAGTCACCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGCCCACATCAGCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCAGGCAACCTGGAC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGTCAGCAGGACTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCTGGGCAGACCAGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTGGCACCTCTGAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTTCTGGCCCACCTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCACTCTGCAGCCCTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCATCCCTCTCTCATT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGGCCCTGCCAAGTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACACATTCCCCAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCCAGGCCCCTGTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACCTTGCAGGCAGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 TTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCTCAGCGATTGCCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTTTGTAGTTTTTTA 2146
Query 1 ---------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTGATC 46
|||||||.||.|.| |||||||||||||||||||||.||||.|.|||
Sbjct 2147 TATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGCAATGGCGTAATC 2220
Query 47 TCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTAT 120
||||||||.||||||||||||||||||||||.||||||||||.||||||||||||||..|||||||||||.||.
Sbjct 2221 TCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTAC 2294
Query 121 AGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGG 194
||.||||||||||||.|||.||||||||||||||||||.||.||||.|||||||..|||||||.|||||||||.
Sbjct 2295 AGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGTCAGGCTGC 2368
Query 195 TCTTGAACTCCTGACCTCAAGTGATCC--ACCACCTCGGCCTCCCAAAGTGTTGAGA----------------- 249
|||.|.||||||||.||||.|||| || .|||||||||||||||.|||||.||.||
Sbjct 2369 TCTCGGACTCCTGATCTCAGGTGA-CCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAAGGGTGAGCCAC 2441
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2442 CATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTCTCTGTCACCCA 2515
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2516 GGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATTCTCCTGCCTCA 2589
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2590 GCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTTAGTAGAGAGAG 2663
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2664 GTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCTCCCAAAGTGCT 2737
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2738 GGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGTTTAGTGTGAAC 2811
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2812 AAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGCCCCTGAAGTGT 2885
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2886 CTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGTTAGCTCTGCTA 2959
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2960 ACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTGTTTGTTGTTTT 3033
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3034 CACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCCAAGGCCTCTCC 3107
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3108 CTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTAGTTCATTTGAC 3181
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3182 CCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAGTGGCCATTCTT 3255
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3256 GTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCACTAAATGCAGC 3329
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3330 CTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTCACAGGACGGGA 3403
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3404 GAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCAGGATATGTTTG 3477
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3478 CGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTACACCCCCACCT 3551
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3552 CTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCCACACACCCTGA 3625
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3626 CTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCGCCACGGAAACG 3699
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3700 CAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTCAGGGTGGTTTG 3773
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3774 CGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGTTTCCTGGGCAG 3847
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3848 AGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCGGCAATGACCAC 3921
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3922 AGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTTCCTGCTCTCTG 3995
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3996 TCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTCCTCTCCTGTCA 4069
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4070 CTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACCACCCAGCCCAC 4143
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4144 CCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCCAGACCCCTCTT 4217
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4218 CTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTCTCGCAGCACTT 4291
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4292 GATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAGAGCCAGGACAG 4365
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4366 TGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCTCAATAGATGTG 4439
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4440 TAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGCACTCTGACCCA 4513
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4514 GATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTGGCCAGGGACAG 4587
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4588 TTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCATCAGCCAGTGAA 4661
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4662 GGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAGAAAGTTTCAGG 4735
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4736 GCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGAAAGAATTGGAC 4809
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4810 TTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTGCTTAAAGCAAC 4883
Query 250 --------- 249
Sbjct 4884 AAGCATGTA 4892
