Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10792
Subject:
NR_152444.1
Aligned Length:
2391
Identities:
215
Gaps:
2144

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TATTTAAAGGGGAAAGAGGCCGCGGCGCCGGCCCCAGGACCCGACCCGGCCCCAGGAGAGTGTGCTCGTTCTGT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TCACGGAGCTGGCCGCGTTAGCGACGTCCTCGAGTCCGCGGCGGGCACGATGCAGCTCTTGTGCTCTACTGTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GGAGATCAAGGACATTGGCCACCTGACCCGTTGCACGTTGTAACCGAGGAACTCGGAAGCTACAGCCGAAGGAA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGTGGGAGCTGCAGCCTCGCGGGGGCTGATGTCAAGACTACTCTCTCTCAGATCCCAGGATTGGCATGTGATGA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGAGATGAGCCGAAGGCAGGAGGGAACGCCCTGGGAGGTGTTGATGCTGAGTTGGGGAGGCTCCTAGACGAAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCGCCCCCATCTACTGACTGTGCCAGTCTTACATTTTCAGGATGGAGTGGCCAAGGGATGATATAAACAAAGCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TACGTTACCGTGGGAAGAAGACAGACTGTTTTCTTAGCTGGGACGTTGGCTTTTGTCCAGGGTGGCTCTGGTGT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GTGGGAGCAACAGGTCCCATTTTAGCAATTCTTTGTCAATGGTTTGAATTTTTTTTTTTTTTAAGATGGAACGG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GAGAGAAGAGGCTAATTTTCGCGTCATGTTAATCTCACTTCTCTGGCATGTAAGGGTGCTGGTATGCCTGCTGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCCCCACTCCCAGTTCTGTGTTCCAGAAATTGAGATGGCTCCCTGCCTGTGACTATGATTAGGAGCCTTGCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CATTTCAGAATCTCCCTTCAACCTGCTAGGGCAGGTATCAGAAATTCCAAAGGGCATTTATGTGAGGCACCTAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTAGAGCCTATCAAAGTAGGAAGGGAGAGCCATTTGAAAGGCATCATATTTCAAACTTTTGCTATTATCTGTGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TATCTTTACAGTCACGGGAACACACTAGCGCTACTGAAAAGATACTTATACAATTTTAAGTGTCTTTAAAATTT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GTGTCCCATAATGGGACATCACCTGTTGTATATATGCCATGTATTCTATTTTAGAATCCTGTATCTTATGACCA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TAAAGTCATAGTCAAGGACCAGCAGTGTTGGTGTACTGTCAACGGAAGTGCACAGTCTCACTCTAGGATCCCAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCCAGACTTCCTGAATCAGACTCTGGCAGGGTTTTTTGTTTTTTTGTTTTTGTTTTGAGCCAGAGTCTCACTGT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GTCGCCCAGGCTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAGCCTCCGCCTCCCAGGTTCAAGCGATTCTC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTGCCTCATCCTCCGGAGTAGCTGGGATTACAGGCGCCTGCCACCACACCTGGCTAATTTTTGTATTTTTAGTA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GAGATGGGGTTTCGCCATGTTTGTCAGGCTGGTCTCAAAACTCCTGACCTCAGGTGATGGCGCCCACCTTGGCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCCCAAAGTGCTGGGATTATAGGAGTGAGCCACCGCGCCGGGCCAGACTCTGGCATTTTAACAATCCCAGGTGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TGTGTGTGCATGTGAAAATTTAAGTACCATTGGTCTAGATCCTACACTCTTTAGGATATCACCATCTGTAGGTA  1554

Query    1  ----------------------------------------------------------------------ATGG  4
                                                                                  ||||
Sbjct 1555  GAATATTTAAAGCATAATAGGTATGACTGATAGATTATTTTATCCAAAGTTCTTTTTTTTTTTTTTTGAGATGG  1628

Query    5  AGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTC  78
            |||||.||||||||||||||.|||||||||||||||.|||||||||||||||||||.||||||||||..|||||
Sbjct 1629  AGTCTTGCTCTGTTGCCCAGACTGGAGTGCAGTGGCGTGATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGTTC  1702

Query   79  AAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA---TTT  149
            |.||.|||||.||||||||||||||..||||||||||.|||.||.||..||||||||||||.||||||   |||
Sbjct 1703  ACGCCATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGGCTACAGGCACCCACCACCACGCCTGGCTAATTTTTT  1776

Query  150  TGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCAC  223
            |||||||||.||.||||.|||||||..||.||||||.||||.||||||.||.||||||||||||  ||||||.|
Sbjct 1777  TGTATTTTTAGTAGAGATGGGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTCA--TGATCCGC  1848

Query  224  C-ACCTCGGCCTCCCAAAGTGTTGAGA-----------------------------------------------  249
            | .||||||||||||||||||.|..||                                               
Sbjct 1849  CTGCCTCGGCCTCCCAAAGTGCTAGGATTACAGGCGTGAGCCACCACGCCCGGCCCCAAAGTTCTAAAGTAACA  1922

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1923  TTCTATTGCTAAAGAAATCCTAACCTACTATGTAACATTTTTCTCTTAGTTAAAAATGTGAACTTATTATTAAC  1996

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1997  CTCAATTTTTTAGAGGCCTCCAATCTTTTTAAAATATAAATATTTTTGATTGACAAATCATAATTATACACTTA  2070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2071  TGGGGGTATAAACCTCAATTTTTGTAACCCTATTTTGGCATTTTCCTGTCCTTACATCTCAGCTTAAATGCTCC  2144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2145  CTCTTTTGGGAGGCCTTTTTCTGCCTTCAACATAGTAGAGCCTTTTCCCCCACCCCTCTGTAACATAATGCCCT  2218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2219  GTTTTATTTTTACTGCTTTTATTTTCATGCTTTGTGGGTGTCCCCACTGGAGTGTAAGCCCTATGGGAGCAAGG  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  GCTGACCTGTGACTGTTTTATCTCCAGGGCCAACAGCAGTGTTACTGTATAGTATGTACTCAATAAATATTTGT  2366

Query  250  -----------------------  249
                                   
Sbjct 2367  TGGCTTTATCTCTTATTTTTTAA  2389

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