Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- XR_001737162.2
- Aligned Length:
- 3817
- Identities:
- 217
- Gaps:
- 3574
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCAGCCACCCTGGGGAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TTCCGAGGGTGGGAGTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCGGTGCGGGCCTGAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CGGAGCCGCACTAAGAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGGATGTCGGGAGCTATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCCCGCTGTGCCACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGCGTGGCCGCGCGACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGTGCGGACAGCCCCTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GTGGCCCTGGGTCAGCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CACCGACAAGAAGTTGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGAATCGGCTTACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCACGCGGGAGGCCATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CGCTATCCACGCCCTCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAGCCAATACGAAGAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGGTCCACCTGGTCATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCTGATGGAGAGGCTGCAGGGCATCGTCACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGACCACCGAGCTGAATTCGCGCGCTGTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCAAGTGGTGCTAACACGCTGGCAGGGGGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGGAAAGATGTCGGGGTCACCCGTCCAAAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGGCGAGAACACGCCCTTCGCAGAGCACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGAGCCTAAAGGACCAGGTACAGGAGCTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATGGGAGACGTCCTGCACAAGTCCCTGCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGAGGGTCGTCTTCCAGGAGCTTTTCTCTTTCAGATTTGGGAGGAAGCCTATCAGCGAGTGGCTAATGAGCAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGATTTATGAAGGTTCCAGACAGTTGGCTGCCGAGTGAACCCTCTGTCCCTGAGCTAACCCACATACTAGCAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGAGGAAGTCAGAGTCGGCCACTAACCAGATGCAAATCCCCACACTCTTCCCCTTAGCGCTTGACCGTGCCTCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 CAGCTGCTAACTGGCCTCAAATGATGCATGTGAGGTCAGGATTCATTGAGTAGAATGCCCCCACCAAGTGCCTC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTCTTTAATTAGAGGTCATCATGGAAATGGTCGGGATATTTACGTGGTGCCTGGCTTGAGTAAAAATCTGAAG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCAGATGCTTCAGGATTAAGACCCCATGCTCTGGCCTTGGCCCCACAGCCCAGCTCCATGACCTTCTCCAGCTG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGCAGGAGAATGCCTACCTGACCACCATCACCAAGCAGATCACGCCCTACGTCCGCTCCATTGCCAAGGTGAA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 GGAGCGGCTGGAGCCCAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGAGTCTACAGAACACGCACGACGACA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCAGGAACAACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAAAAGAGAGAGAAGACATCAGAGCCT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAAGGAAACAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAAAAATATGGATCATCACAGATCCAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ACAGAAAAATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGCAAATGGGACCGGTCCCCAGGGTCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GGCTCTTAGAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCCATGATGGTTTTTTTTATTTTTTAT 2516
Query 1 -------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCT 65
|||||||.|||||||||||||||||||||||||.|.||| || ||||||||||||||||||||||
Sbjct 2517 TTTTGAGATGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGG--TGCAATCTCGGCTCACTGCAACCTCT 2588
Query 66 GCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCAC----CACCA 135
||||||..|||||||||||||||.||||||||||||||.||||||||||||.| |||.||.| |||||
Sbjct 2589 GCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATT----ACAGGCGCCTGACACCA 2658
Query 136 CGCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTG 207
|||||.||||| ||||||||||||.||.||||.|||||||..|||||||.|.|||||||||||..|||.||.|
Sbjct 2659 CGCCCCGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACGCCAG 2732
Query 208 ACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA------------------------------- 249
||||||.|||||||||| .||||.|||||||||||||.|||||
Sbjct 2733 ACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGGGGTGAGTCACCGCGCCTGGCCAAT 2806
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2807 GTTGTTGTTGTTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGAGTGCAATGGCGCAATCTCTGGCTC 2880
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2881 ACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCCAGAGTAGCTGGGATTACAGGCATG 2954
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2955 TACCATCACACCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTCTCCATGTTGGTCAGGCTGGCCTCG 3028
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3029 AACTCCCAACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGGATTACAGGGGTAAGCCACTGTGCC 3102
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3103 CGGCCGGTTATTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAGAAGCTCTGACAGGCCATAATTTCA 3176
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3177 GATCCTTTGGCTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGAAGTCTTCGTCCTTGTCACAGTAGC 3250
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3251 TTGGGATGACTCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAGCAAGAAATCCCTCGCTAGTTCCAC 3324
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3325 ACCTACGCACCGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTGGTATGTCAGGGTGTGCCGGTTTTA 3398
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3399 GGTAACAAGACTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATCCAGTTCCTCCGGAATAACAGTCCC 3472
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3473 ACTGTTAACCTGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTGACTCATGGAAGGATGAGGAACGTT 3546
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3547 TGCTCCAGCTTCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGGGGTTAGCACCTGGCCAGCTTATGT 3620
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3621 GGCAGATGGTCTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCCCTCCTGAGTCCGACTTCCGTTGAT 3694
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3695 AGCAAGGCACTGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGCAGTTTTCCATTTCTCCACAGTATC 3768
Query 250 ------------------------------------------- 249
Sbjct 3769 CTTTTCATTTAGAGGAGCTTAATAAATGCTTTTTAAAAAGTAA 3811
