Nucleotide Global Alignment
Description
- Query:
- ccsbBroadEn_10792
- Subject:
- XR_001737164.2
- Aligned Length:
- 4850
- Identities:
- 217
- Gaps:
- 4607
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGGTGGATGCCGGAAGAGGCGTCGCCTGCGGGTCACCCAGAGGACACCCGGCGGGGAATTCCGAGGGTGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGAGGAGAGGTAGGAGAGGCCACGGCAGAGGGAGGCCCCGCGCAGAGTGGGAACCATCGCCCGGTGCGGGCCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GAACTTCCAGGGCCGGCTACTCCTCGGCAGAGCGACCGCGCGGTGTCTCAGAGCGCGGCCCGGAGCCGCACTAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GAGCGCTGGACGGCGGGAGAGAGGCTCGGAGGACCGGTAGCTCCCAGCAAAGCGGCCCAGCGGATGTCGGGAGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TATCTTCGGGCCCCTGGAGGGCCCGAGCTCCCTGGATGCCCCGAGCATCCACCCGCTGGTGTGCCCGCTGTGCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ACGTGCAGTACGAGCGCCCGTGTCTTCTGGACTGTTTCCACGACTTCTGTGCCGGCTGCCTGCGTGGCCGCGCG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCGACGGCCGCCTCACCTGCCCGCTGTGCCAGACGTGGAGACCACGTACTTCTGCAACACGTGCGGACAGCCC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTATGCGCGCGCTGCCGCGACGAGACGCACCGAGCACGCATGTTCGCGCGCCACGACATCGTGGCCCTGGGTCA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCGAAGCCGCGACGTGCCCCAGAAGTGCACGCTGCACGCAGAGCCCTACCTCTTGTTCTCCACCGACAAGAAGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TGCTGTTGTGCATCCGCTGCTTCCGCGACATGCAGAAGGAGAGCCGGGCACACTGCGTGGACCTGGAATCGGCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TACGTGCAGGGCTGCGAGCGGCTGGAGCAGGCGGTGCTGGCCGTGAAGGCCCTGCAGACGGCCACGCGGGAGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATCGCGCTGCTGCAGGCCATGGTGGAGGAGGTGCGGCACAGCGCCGCCGAGGAGGAGGACGCTATCCACGCCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTTCGGCAGCATGCAGGACAGGCTGGCAGAGAGGAAAGCGCTGCTGCTGCAGGCTGTGCAGAGCCAATACGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAGAAGGACAAGGCCTTCAAGGAGCAGCTCTCTCACTTGGCCACCTTGCTGCCCACCCTGCAGGTCCACCTGGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CATCTGCTCCTCCTTCCTCAGCTTGGCCAACAAGGCTGAGTTCCTGGACCTGGGCTATGTGAGTCTCCTCTGCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCTGCAGATGCCCCCTCCCCACCAGGAGCCCACCCTGCAGACCAAAGCCACCAACTCAGGGGTGGGCAGCCTGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CACCTGGAGCCTGGACCAGGGATCTCGGGGCTGACCCCCTCCCAACTCCATCATCTGCAAACCTGTTAGGGTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGTTACAAGGACAGTGAAGCCAGGAAGGGGGCATGAGCCTACAGTCCCCCGTGGGGCGGAGTGACCACTGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCAGCCGCCCCCTCTCCTGTGGATTTGGGGATGGGATGGGGGTTTGTCCGGGTGAGTCCCAGAAGAGGGCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CGCTGCTAAGGGACACCAAGTCAAGTGCCAAAGACAGACGTGCTCCGCCTCCATCTCCCCTCTTCCTGCCCCCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GGCTGCCACACCTCCACCGGCCTGAGGCCCTCCTCACTGCCACAGGAGCTGATGGAGAGGCTGCAGGGCATCGT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACGCGGCCGCACCACCTAAGGCCTATTCAGAGCAGCAAGATTGCCAGTGACCACCGAGCTGAATTCGCGCGCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTCTGGAGCCACTGCTGCTGCTGGGGCCACGTCGGGTGGCAGCTGCTGCAAGTGGTGCTAACACGCTGGCAGGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGCTTAGGCCCCAAGGCGCTGACGGGGCCCCACTGCCCCTCCCCAGTAGGAAAGATGTCGGGGTCACCCGTCCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AAAGCCCACGCTGCACCGGTCCATCAGCACCAAGGTGCTGCTGGCGGAGGGCGAGAACACGCCCTTCGCAGAGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 ACTGCCGCCACTATGAGGACTCCTACCGGCACCTGCAGGCAGAGATGCAGAGCCTAAAGGACCAGGTACAGGAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTGCACCGAGACCTCACCAAGCACCACTCGCTCATCAAGGCGGAGATCATGGGAGACGTCCTGCACAAGTCCCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAACTGGACGTGCAGATCGCCTCGGAGCACGCCTCCTTAGAGGGCATGAGGGTCGTCTTCCAGGAGATTTGGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AGGAAGCCTATCAGCGAGTGGCTAATGAGCAGGAGATTTATGAAGGTTCCAGACAGTTGGCTGCCGAGTGAACC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTCTGTCCCTGAGCTAACCCACATACTAGCAGAGGAGGAAGTCAGAGTCGGCCACTAACCAGATGCAAATCCCC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACACTCTTCCCCTTAGCGCTTGACCGTGCCTCCCAGCTGCTAACTGGCCTCAAATGATGCATGTGAGGTCAGGA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TTCATTGAGTAGAATGCCCCCACCAAGTGCCTCCCTCTTTAATTAGAGGTCATCATGGAAATGGTCGGGATATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TACGTGGTGCCTGGCTTGAGTAAAAATCTGAAGCCAGATGCTTCAGGATTAAGACCCCATGCTCTGGCCTTGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCCACAGCCCAGCTCCATGACCTTCTCCAGCTGAGGCAGGAGAATGCCTACCTGACCACCATCACCAAGCAGAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CACGCCCTACGTCCGCTCCATTGCCAAGGTGAAGGAGCGGCTGGAGCCCAGGTCTTTGTTTGTTTGAGACAGTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCGCTCTGCCGCCCAGGCTGGAGTGCAATGGCGCCATCTCAGCTCTCACTGCAGCCTCCACCTCCCAGGTTCAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TCGATTCTCCTGCCTCAGCCTCCAGAGTAGCTGGGATTACAGGTTTCAGGCACCCGTGGATGAGCAGTCAGAGA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTCTACAGAACACGCACGACGACAGCAGGAACAACGCGGCCTCAGCCAGGAATAATCCAGGAAGTGTCCCGGAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AAGAGAGAGAAGACATCAGAGCCTAAAGGAAACAGCTGGGCTCCGAACGGCCTCTCAGAAGAGCCTCTACTGAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAATATGGATCATCACAGATCCAAACAGAAAAATGGGGGCGATGTCCCCACATGGAGGGAACACCCGACTTAGC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AAATGGGACCGGTCCCCAGGGTCAGGCTCTTAGAGCAGGCACAAGACTGGGACACTGGACAGAAGGTTGTTCCC 3034
Query 1 -------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG 43
|||||||.|||||||||||||||||||||||||.|.||| ||
Sbjct 3035 ATGATGGTTTTTTTTATTTTTTATTTTTGAGATGGAGTTTCGCTCTGTTGCCCAGGCTGGAGTGTAATGG--TG 3106
Query 44 --ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGG 115
||||||||||||||||||||||||||||..|||||||||||||||.||||||||||||||.|||||||||||
Sbjct 3107 CAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGG 3180
Query 116 ACTATAGACATGCAC----CACCACGCCCGGCTAA--TTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTT 183
|.| |||.||.| ||||||||||.||||| ||||||||||||.||.||||.|||||||..|||||||
Sbjct 3181 ATT----ACAGGCGCCTGACACCACGCCCCGCTAATTTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATGTT 3250
Query 184 AGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA------- 249
.|.|||||||||||..|||.||.|||||||.|||||||||| .||||.|||||||||||||.|||||
Sbjct 3251 GGCCAGGCTGGTCTCAAACGCCAGACCTCAGGTGATCCACCTGCCTCAGCCTCCCAAAGTGCTGAGATTACAGG 3324
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3325 GGTGAGTCACCGCGCCTGGCCAATGTTGTTGTTGTTTTTAAGACAGAATTTCACTCTTTGTTGCCCAGGCTGGA 3398
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3399 GTGCAATGGCGCAATCTCTGGCTCACCGCAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTACCTCAGCCCCC 3472
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3473 AGAGTAGCTGGGATTACAGGCATGTACCATCACACCCGGCTAATTTTTTGTATTTTAAGTAGAGAGGGGGTTTC 3546
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3547 TCCATGTTGGTCAGGCTGGCCTCGAACTCCCAACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAATGCTGGG 3620
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3621 ATTACAGGGGTAAGCCACTGTGCCCGGCCGGTTATTTCTTTAAAAGGTAATCATTTGTCAAGAGTAAAACCCAG 3694
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3695 AAGCTCTGACAGGCCATAATTTCAGATCCTTTGGCTTGGGCAGTTTTGATTTTCCCCGTGTTTGCATGGCATGA 3768
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3769 AGTCTTCGTCCTTGTCACAGTAGCTTGGGATGACTCCCAGTCCACATGGAAAACATCAGGGAGTGACAATCCAG 3842
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3843 CAAGAAATCCCTCGCTAGTTCCACACCTACGCACCGAGCGTCGGTGTGCCAGGCCCTGTGCTGGGCAGAGTGTG 3916
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3917 GTATGTCAGGGTGTGCCGGTTTTAGGTAACAAGACTCCACCACTGAGTGGCACCTGCCCTATTGCAAAGGAATC 3990
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3991 CAGTTCCTCCGGAATAACAGTCCCACTGTTAACCTGGTGCTACTGGGAAGTTCCACACAGTAATCTGAGCAGTG 4064
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4065 ACTCATGGAAGGATGAGGAACGTTTGCTCCAGCTTCTCTCCCTTTCCAGCAAGGGCAGAGCTCCTAAAGCCAGG 4138
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4139 GGTTAGCACCTGGCCAGCTTATGTGGCAGATGGTCTCAGTTACAACTTCGCTGCTTTCCCAAACTCCTGCAGCC 4212
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4213 CTCCTGAGTCCGACTTCCGTTGATAGCAAGGCACTGGGTGGCAGCAACCTTTTTTCTAGTAGTTTTTTCCCAGC 4286
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4287 AGTTTTCCATTTCTCCACAGTATCCTTTTCATTTAGAGGAGCTTAATAAATGCTTTTTAAAAAGTAACCCACGT 4360
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4361 GACGTAAAATTTTACAAGTTTTTGTGGCAAAATGATGCCCAGATAGTCACATTTAAGCAAATATTCAGCTTGAT 4434
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4435 TCAGTGATTAACAGCAAATGGGTCTACGTGCTAACATGGCAGCACATTCAACACATAACACATCACTCACATTG 4508
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4509 ACGTCCACTGTCCCTGCACCTGCTACTTCAGGGGCACTGAGGCTCCTGTTCCAAGGCCTTACAAACCTATGTGG 4582
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4583 TGGCCTGCAGGGCAAAAGGAATTATCATTACAACTGGTTAGAGGTAGGAATTCAGAAAGAAATTGAGGAGGCCA 4656
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4657 AACACACGTCGTTTGAGGCTAAAGGCTTAAGACGCTTCTTACCCAAGAGTGACCTCAGAGTTTCACATCCCAGA 4730
Query 250 -------------------------------------------------------------------------- 249
Sbjct 4731 CAATCACACTGTGGTTGAGTGAAATCAAGTGCAGTTTTATTTAAGAACTGGAAAGAATAATCAGTATCTGTGAA 4804
Query 250 ---------------------------------------- 249
Sbjct 4805 AGAAAATCCAATTTAGAATATTTAAATAAACATTTATGTA 4844
