Nucleotide Global Alignment

Description

Query:
ccsbBroadEn_10983
Subject:
XM_024450770.1
Aligned Length:
3023
Identities:
1039
Gaps:
1984

Alignment

Query    1  ATGGCGGAGCAGGAGAGCCTGGAATTCGGCAAGGCAGACTTCGTGCTGATGGACACCGTCTCCATGCCCGAGTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  CATGGCCAACCTCAGGCTCAGATTTGAAAAAGGGCGCATCTATACGTTCATTGGAGAAGTCGTCGTTTCTGTGA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  ACCCTTACAAGTTGTTGAACATCTATGGAAGAGACACAATTGAGCAGTATAAAGGCCGTGAGCTGTATGAGAGA  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CCGCCTCACCTTTTTGCTATTGCGGATGCTGCTTACAAGGCTATGAAGAGGCGATCAAAAGACACTTGTATTGT  296
                                                      ||||||||||||||||||||||||||||||||
Sbjct    1  ------------------------------------------ATGAAGAGGCGATCAAAAGACACTTGTATTGT  32

Query  297  GATATCAGGGGAAAGTGGAGCTGGTAAAACGGAAGCCAGTAAGTACATTATGCAGTATATTGCGGCCATCACCA  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   33  GATATCAGGGGAAAGTGGAGCTGGTAAAACGGAAGCCAGTAAGTACATTATGCAGTATATTGCGGCCATCACCA  106

Query  371  ACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTGAAGAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGCTTTT  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  107  ACCCCAGTCAGAGAGCAGAGGTTGAAAGAGTGAAGAATATGTTGCTTAAGTCCAACTGTGTTTTGGAAGCTTTT  180

Query  445  GGAAATGCCAAAACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAATACATGGATATCAACTTTGACTTCAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  181  GGAAATGCCAAAACCAACCGTAATGACAACTCAAGCAGGTTTGGAAAATACATGGATATCAACTTTGACTTCAA  254

Query  519  GGGTGACCCTATTGGTGGGCATATCAATAACTACTTACTAGAAAAGTCTCGAGTGATTGTGCAACAGCCAGGAG  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  255  GGGTGACCCTATTGGTGGGCATATCAATAACTACTTACTAGAAAAGTCTCGAGTGATTGTGCAACAGCCAGGAG  328

Query  593  AAAGAAGCTTTCATTCTTTCTATCAGCTACTCCAAGGAGGTTCAGAACAAATGCTACGCTCTCTACATCTCCAG  666
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  329  AAAGAAGCTTTCATTCTTTCTATCAGCTACTCCAAGGAGGTTCAGAACAAATGCTACGCTCTCTACATCTCCAG  402

Query  667  AAATCCCTTTCATCCTACAACTATATTCATGTGGGAGCTCAATTAAAGTCTTCTATCAATGATGCTGCCGAATT  740
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  403  AAATCCCTTTCATCCTACAACTATATTCATGTGGGAGCTCAATTAAAGTCTTCTATCAATGATGCTGCCGAATT  476

Query  741  CAGAGTTGTTGCTGATGCCATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATTTTGG  814
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  477  CAGAGTTGTTGCTGATGCCATGAAAGTCATTGGCTTCAAACCTGAGGAGATCCAAACAGTGTATAAGATTTTGG  550

Query  815  CTGCTATTCTGCACTTGGGAAATTTAAAATTTGTAGTAGATGGTGACACGCCTCTTATTGAGAATGGCAAAGTA  888
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  551  CTGCTATTCTGCACTTGGGAAATTTAAAATTTGTAGTAGATGGTGACACGCCTCTTATTGAGAATGGCAAAGTA  624

Query  889  GTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATATGGTTGAGAAAGCCCTTCTTTACCGGACTGTGGC  962
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  625  GTATCTATCATAGCAGAATTGCTCTCTACTAAGACAGATATGGTTGAGAAAGCCCTTCTTTACCGGACTGTGGC  698

Query  963  CACAGGCCGTGACATCATTGACAAGCAGCACACAGAACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCCAAGG  1036
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  699  CACAGGCCGTGACATCATTGACAAGCAGCACACAGAACAAGAGGCCAGCTACGGCAGAGACGCCTTTGCCAAGG  772

Query 1037  CAATATATGAGCGCCTTTTTTGTTGGATCGTTACTCGCATCAATGATATTATTGAGGTCAAGAACTATGACACC  1110
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  773  CAATATATGAGCGCCTTTTTTGTTGGATCGTTACTCGCATCAATGATATTATTGAGGTCAAGAACTATGACACC  846

Query 1111  ACAATCCATGGGAAAAACACTGTTATTGGTGTCTTGGATATCTATGGCTTTGAAATCTTTGACAACAACAGTTT  1184
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  847  ACAATCCATGGGAAAAACACTGTTATTGGTGTCTTGGATATCTATGGCTTTGAAATCTTTGACAACAACAGTTT  920

Query 1185  TGAACAATTCTGTATCAATTACTGCAATGAGAAACTGCAGCAGCTATTTATTCAGCTGGTTCTGAAGCAAGAAC  1258
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  921  TGAACAATTCTGTATCAATTACTGCAATGAGAAACTGCAGCAGCTATTTATTCAGCTGGTTCTGAAGCAAGAAC  994

Query 1259  AAGAGGAATACCAGCGGGAAGGGATCCCCTGGAAACATGTGGGATTG-CTA-----------------------  1308
            ||||||||||||||||||||||||||||||||||||||     |||| |||                       
Sbjct  995  AAGAGGAATACCAGCGGGAAGGGATCCCCTGGAAACAT-----ATTGACTACTTCAACAATCAGATCATTGTTG  1063

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1064  ACCTCGTGGAGCAACAGCACAAAGGGATCATTGCAATCCTTGATGATGCTTGCATGAATGTCGGCAAAGTCACC  1137

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1138  GATGAAATGTTTCTTGAAGCACTTAACAGTAAATTGGGCAAACACGCCCATTTTTCCAGCCGAAAGCTCTGTGC  1211

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1212  CTCAGACAAAATTCTGGAGTTTGATCGAGATTTTCGAATTCGACATTATGCAGGCGATGTAGTCTATTCTGTCA  1285

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1286  TTGGTTTTATTGACAAAAATAAAGATACTTTATTTCAAGATTTCAAGCGCCTTATGTATAACAGTTCAAATCCT  1359

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1360  GTGCTCAAGAATATGTGGCCTGAAGGCAAACTGAGCATTACAGAGGTGACCAAGCGACCTCTGACTGCTGCTAC  1433

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1434  CTTGTTTAAGAATTCTATGATTGCTCTAGTAGACAACCTTGCATCAAAGGAACCATATTACGTTCGTTGCATCA  1507

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1508  AACCCAATGACAAGAAATCTCCACAGATATTTGATGATGAACGCTGCCGGCACCAAGTAGAATATCTTGGACTA  1581

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1582  CTGGAAAATGTGAGAGTGCGTCGGGCAGGATTTGCCTTCCGCCAGACATACGAGAAGTTTCTTCACAGGTATAA  1655

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1656  GATGATCTCTGAATTCACCTGGCCCAACCATGACCTTCCTTCAGACAAAGAGGCTGTCAAGAAACTAATTGAAC  1729

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1730  GGTGTGGTTTTCAGGATGATGTAGCTTATGGGAAGACCAAAATTTTCATTCGAACACCCCGAACATTGTTTACC  1803

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1804  TTGGAAGAACTCCGTGCCCAGATGCTCATAAGGATTGTCCTCTTTCTACAAAAGGTGTGGCGGGGCACCCTGGC  1877

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1878  CCGCATGCGGTACAAAAGAACCAAGGCAGCTCTGACAATAATCAGGTACTACCGGCGCTACAAAGTGAAGTCGT  1951

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 1952  ACATCCACGAGGTGGCCAGACGCTTCCATGGCGTCAAGACCATGCGAGACTACGGGAAGCACGTGAAGTGGCCA  2025

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2026  AGCCCTCCTAAAGTTCTTCGCCGTTTTGAGGAGGCCCTGCAGACGATTTTCAATAGATGGAGAGCATCCCAGCT  2099

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2100  CATCAAGAGCATTCCGGCCTCAGACCTGCCCCAGGTCAGGGCAAAGGTTGCAGCCGTGGAAATGTTGAAGGGTC  2173

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2174  AAAGGGCTGACCTCGGGCTCCAGAGGGCCTGGGAGGGCAACTATCTTGCTTCAAAGCCAGATACACCTCAGACC  2247

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2248  TCAGGCACTTTTGTCCCTGTTGCTAATGAATTGAAACGGAAGGACAAATACATGAATGTCCTCTTTTCCTGTCA  2321

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2322  CGTCCGTAAGGTAAATCGATTTAGTAAGGTGGAAGACAGAGCAATTTTTGTCACTGACCGTCACCTGTATAAAA  2395

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2396  TGGATCCCACTAAACAGTACAAGGTGATGAAGACTATCCCTCTATACAATTTGACTGGTCTGAGTGTCTCCAAT  2469

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2470  GGAAAGGACCAACTTGTAGTGTTCCATACGAAAGACAACAAAGACCTCATTGTCTGCCTCTTCAGCAAACAGCC  2543

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2544  AACCCATGAGAGTCGAATTGGAGAACTTGTTGGAGTGCTGGTGAATCATTTCAAGAGTGAGAAGCGCCACCTTC  2617

Query 1309  --------------------------------------------------------------------------  1308
                                                                                      
Sbjct 2618  AAGTGAACGTCACCAACCCAGTACAGTGCAGCCTGCACGGGAAGAAGTGCACCGTCTCCGTGGAGACGCGGCTC  2691

Query 1309  ---------------------------------------------------------------  1308
                                                                           
Sbjct 2692  AACCAGCCCCAGCCCGACTTCACCAAGAATCGCTCGGGCTTCATCCTCAGCGTGCCCGGGAAC  2754

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